GCA_000155715.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Thioprofundum hispidum
Comparison to close relatives: Thiolapillus brandeum
Comparison to close relatives: Woeseia oceani
Comparison to close relatives: Thiohalomonas nitratireducens
Comparison to close relatives: Thioalkalivibrio thiocyanoxidans
Comparison to close relatives: Thioalkalivibrio versutus
Comparison to close relatives: Thioalkalivibrio sulfidiphilus
Comparison to close relatives: Spongiibacter tropicus
Comparison to close relatives: Spongiibacter taiwanensis
Comparison to close relatives: Spongiibacter pelagi
Comparison to close relatives: Thiohalophilus thiocyanatoxydans
Comparison to close relatives: Thioalkalivibrio nitratireducens
Comparison to close relatives: Litorivivens lipolytica
Comparison to close relatives: Thiorhodospira sibirica
Comparison to close relatives: Sedimenticola selenatireducens
Comparison to close relatives: Acidihalobacter ferrooxydans
Comparison to close relatives: Thioalkalivibrio nitratis
Comparison to close relatives: Kineobactrum salinum
Comparison to close relatives: Spongiibacter marinus
Comparison to close relatives: Thioalkalivibrio denitrificans
Comparison to close relatives: Acidihalobacter yilgarnensis
Comparison to close relatives: Thioalkalivibrio thiocyanodenitrificans
Comparison to close relatives: Spongiibacter thalassae
Comparison to close relatives: Sedimenticola hydrogenitrophicus
Comparison to close relatives: Wenzhouxiangella limi
Comparison to close relatives: Haliea salexigens
Comparison to close relatives: Thioalkalispira microaerophila
Comparison to close relatives: Litorivivens aequoris
Comparison to close relatives: Thiohalospira alkaliphila
Comparison to close relatives: Phaeobacterium nitratireducens
Comparison to close relatives: Neptuniibacter caesariensis
Comparison to close relatives: Imhoffiella purpurea
Comparison to close relatives: Neptuniibacter halophilus
Comparison to close relatives: Acidihalobacter aeolianus
Comparison to close relatives: Ectothiorhodospira magna
Comparison to close relatives: Sedimenticola thiotaurini
Comparison to close relatives: Kineobactrum sediminis
Comparison to close relatives: Haliea atlantica
Comparison to close relatives: Ectothiorhodosinus mongolicus
Comparison to close relatives: Neptuniibacter victor
Comparison to close relatives: Zhongshania marina
Comparison to close relatives: Thioalkalivibrio halophilus
Comparison to close relatives: Marinobacterium zhoushanense
Comparison to close relatives: Dasania marina
Comparison to close relatives: Ectothiorhodospira lacustris
Comparison to close relatives: Marinimicrobium koreense
Comparison to close relatives: Porticoccus litoralis
Comparison to close relatives: Dasania phycosphaerae
Comparison to close relatives: Oceanococcus atlanticus
Comparison to close relatives: Marinimicrobium alkaliphilum
CAZyme: GH13
CAZyme: GH23
CAZyme: GH6
CAZyme: GH153
CAZyme: GH16
CAZyme: GH28
CAZyme: GH78
CAZyme: GH103
CAZyme: GH3
CAZyme: GH0
CAZyme: GH19
CAZyme: GH114
CAZyme: GT13
CAZyme: GT51
CAZyme: GT4
CAZyme: GT2
CAZyme: GT22
CAZyme: GT1
CAZyme: GT28
CAZyme: GT9
CAZyme: GT30
CAZyme: GT19
CAZyme: GT0
CAZyme: GT20
CAZyme: GT25
CAZyme: GT26

GCA_000155715.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_000155715.1 (CAZyme)
CAZyme: CE11
Occurance: 3

GCA_000155715.1 (CAZyme)
CAZyme: CBM20
Occurance: 2

GCA_000155715.1 (CAZyme)
CAZyme: CBM50
Occurance: 12

GCA_000155715.1 (CAZyme)
CAZyme: CBM41
Occurance: 1

GCA_000155715.1 (CAZyme)
CAZyme: CBM13
Occurance: 5

GCA_000155715.1 (CAZyme)
CAZyme: CBM56
Occurance: 2

GCA_000155715.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000155715.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_000155715.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000155715.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000155715.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000155715.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000155715.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000155715.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000155715.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000155715.1 (Pathway)
Pathway: Glyoxylate cycle
Metabolic module: M00012

GCA_000155715.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000155715.1 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_000155715.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000155715.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000155715.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000155715.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000155715.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000155715.1 (Pathway)
Pathway: Ectoine biosynthesis, aspartate => ectoine
Metabolic module: M00033

GCA_000155715.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000155715.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000155715.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000155715.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000155715.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000155715.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000155715.1 (Pathway)
Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Metabolic module: M00064

GCA_000155715.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000155715.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000155715.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_000155715.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000155715.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_000155715.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000155715.1 (Pathway)
Pathway: Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Metabolic module: M00117

GCA_000155715.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000155715.1 (Pathway)
Pathway: Pantothenate biosynthesis, valine/L-aspartate => pantothenate
Metabolic module: M00119

GCA_000155715.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000155715.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000155715.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_000155715.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P
Metabolic module: M00124

GCA_000155715.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000155715.1 (Pathway)
Pathway: Succinate dehydrogenase, prokaryotes
Metabolic module: M00149

GCA_000155715.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000155715.1 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCA_000155715.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000155715.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_000155715.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000155715.1 (Pathway)
Pathway: Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Metabolic module: M00572

GCA_000155715.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000155715.1 (Pathway)
Pathway: Imipenem resistance, repression of porin OprD
Metabolic module: M00745

GCA_000155715.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000155715.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000155715.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000155715.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000155715.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc
Metabolic module: M00996

GCA_000155715.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000155715.1 (Pathway)
Pathway: UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Metabolic module: M01009

GCA_000155715.1 (Pathway)
Pathway: UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA
Metabolic module: M01035

GCA_000155715.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_000155715.1 (Pathway)
Pathway: Methylcitrate cycle
Metabolic module: M00982

GCA_000155715.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_000155715.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000155715.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_000155715.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000155715.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_000155715.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000155715.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000155715.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000155715.1 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_000155715.1 (Pathway)
Pathway: Siroheme biosynthesis, glutamyl-tRNA => siroheme
Metabolic module: M00846

GCA_000155715.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000155715.1 (Pathway)
Pathway: Alanine degradation I
Metabolic module: MF0033

GCA_000155715.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000155715.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_000155715.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000155715.1 (Pathway)
Pathway: Glyoxylate bypass
Metabolic module: MF0063

GCA_000155715.1 (Pathway)
Pathway: Triacylglycerol degradation
Metabolic module: MF0064

GCA_000155715.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000155715.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000155715.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000155715.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000155715.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000155715.1 (MAGs)
MAGs: no MAG matches found