GCA_000152145.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Oscillochloris trichoides
Comparison to close relatives: Chloroflexus aurantiacus
Comparison to close relatives: Chloroflexus islandicus
Comparison to close relatives: Chloroflexus aggregans
Comparison to close relatives: Roseiflexus castenholzii
Comparison to close relatives: Ardenticatena maritima
Comparison to close relatives: Nitrolancea hollandica
Comparison to close relatives: Sphaerobacter thermophilus
Comparison to close relatives: Aggregatilinea lenta
Comparison to close relatives: Thermalbibacter longus
Comparison to close relatives: Actinomadura macrotermitis
Comparison to close relatives: Acidimicrobium ferrooxidans
Comparison to close relatives: Actinomadura kijaniata
Comparison to close relatives: Amycolatopsis benzoatilytica
Comparison to close relatives: Actinomadura montaniterrae
Comparison to close relatives: Actinomadura pelletieri
Comparison to close relatives: Amycolatopsis keratiniphila
Comparison to close relatives: Actinomadura apis
Comparison to close relatives: Amycolatopsis halotolerans
Comparison to close relatives: Actinomadura namibiensis
Comparison to close relatives: Amycolatopsis orientalis
Comparison to close relatives: Acidothermus cellulolyticus
Comparison to close relatives: Actinomadura madurae
Comparison to close relatives: Actinocorallia aurantiaca
Comparison to close relatives: Catenulispora rubra
Comparison to close relatives: Actinomadura rifamycini
Comparison to close relatives: Actinomadura citrea
Comparison to close relatives: Amycolatopsis rifamycinica
Comparison to close relatives: Catenulispora pinisilvae
Comparison to close relatives: Actinomadura lepetitiana
Comparison to close relatives: Blastococcus saxobsidens
Comparison to close relatives: Catenulispora acidiphila
Comparison to close relatives: Actinomadura rubteroloni
Comparison to close relatives: Catenulispora fulva
Comparison to close relatives: Actinomadura geliboluensis
Comparison to close relatives: Actinomadura parmotrematis
Comparison to close relatives: Actinomadura glauciflava
Comparison to close relatives: Actinomadura deserti
Comparison to close relatives: Actinomadura roseirufa
Comparison to close relatives: Williamsia serinedens
Comparison to close relatives: Catenulispora subtropica
Comparison to close relatives: Actinomadura nitritigenes
Comparison to close relatives: Haloactinopolyspora alba
Comparison to close relatives: Trebonia kvetii
Comparison to close relatives: Actinomadura meyerae
Comparison to close relatives: Cryptosporangium japonicum
Comparison to close relatives: Cryptosporangium arvum
Comparison to close relatives: Cryptosporangium cibodasense
Comparison to close relatives: Cryptosporangium minutisporangium
Comparison to close relatives: Cryptosporangium eucalypti
Comparison to close relatives: Actinomadura cremea
Comparison to close relatives: Amycolatopsis lurida
Comparison to close relatives: Actinomadura luteofluorescens
Carbon source: starch
CAZyme: GH94
CAZyme: GH13
CAZyme: GH31
CAZyme: GH6
CAZyme: GH39
CAZyme: GH23
CAZyme: GH2
CAZyme: GH99
CAZyme: GH5
CAZyme: GH28
CAZyme: GH51
CAZyme: GH101
CAZyme: GH77
CAZyme: GH57
CAZyme: GH73
CAZyme: GH17
CAZyme: GH1
CAZyme: GH0
CAZyme: GH18
CAZyme: GH3
CAZyme: GH109
CAZyme: GH19

GCA_000152145.1 (CAZyme)
CAZyme: GH16
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GH43
Occurance: 2

GCA_000152145.1 (CAZyme)
CAZyme: GT84
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT1
Occurance: 3

GCA_000152145.1 (CAZyme)
CAZyme: GT2
Occurance: 46

GCA_000152145.1 (CAZyme)
CAZyme: GT0
Occurance: 3

GCA_000152145.1 (CAZyme)
CAZyme: GT4
Occurance: 53

GCA_000152145.1 (CAZyme)
CAZyme: GT51
Occurance: 3

GCA_000152145.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT89
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT26
Occurance: 3

GCA_000152145.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT28
Occurance: 7

GCA_000152145.1 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: PL12
Occurance: 2

GCA_000152145.1 (CAZyme)
CAZyme: CE4
Occurance: 6

GCA_000152145.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: CE14
Occurance: 2

GCA_000152145.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: CBM13
Occurance: 4

GCA_000152145.1 (CAZyme)
CAZyme: CBM57
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: CBM50
Occurance: 12

GCA_000152145.1 (CAZyme)
CAZyme: CBM12
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: CBM41
Occurance: 3

GCA_000152145.1 (CAZyme)
CAZyme: CBM2
Occurance: 10

GCA_000152145.1 (CAZyme)
CAZyme: CBM48
Occurance: 8

GCA_000152145.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_000152145.1 (CAZyme)
CAZyme: CBM34
Occurance: 1

GCA_000152145.1 (CAZyme)
CAZyme: CBM63
Occurance: 1

GCA_000152145.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000152145.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000152145.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000152145.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000152145.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000152145.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000152145.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000152145.1 (Pathway)
Pathway: Glyoxylate cycle
Metabolic module: M00012

GCA_000152145.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000152145.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000152145.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000152145.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000152145.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000152145.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000152145.1 (Pathway)
Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
Metabolic module: M00031

GCA_000152145.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000152145.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000152145.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000152145.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000152145.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000152145.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000152145.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000152145.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_000152145.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000152145.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000152145.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000152145.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_000152145.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000152145.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_000152145.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000152145.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000152145.1 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCA_000152145.1 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, archaea
Metabolic module: M00365

GCA_000152145.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000152145.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_000152145.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000152145.1 (Pathway)
Pathway: UDP-Gal biosynthesis, Gal => UDP-Gal
Metabolic module: M00554

GCA_000152145.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000152145.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000152145.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000152145.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000152145.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000152145.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_000152145.1 (Pathway)
Pathway: Sulfur reduction, sulfur => sulfide
Metabolic module: M00986

GCA_000152145.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000152145.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000152145.1 (Pathway)
Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha
Metabolic module: M01018

GCA_000152145.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_000152145.1 (Pathway)
Pathway: GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N
Metabolic module: M01006

GCA_000152145.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000152145.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000152145.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_000152145.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_000152145.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_000152145.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000152145.1 (Pathway)
Pathway: Histidine biosynthesis, PRPP => histidine
Metabolic module: M00026

GCA_000152145.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000152145.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000152145.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000152145.1 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_000152145.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000152145.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000152145.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000152145.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000152145.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_000152145.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000152145.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_000152145.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000152145.1 (Pathway)
Pathway: Arginine degradation IV
Metabolic module: MF0054

GCA_000152145.1 (Pathway)
Pathway: Glycerol degradation II
Metabolic module: MF0061

GCA_000152145.1 (Pathway)
Pathway: Glyoxylate bypass
Metabolic module: MF0063

GCA_000152145.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_000152145.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000152145.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000152145.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000152145.1 (Pathway)
Pathway: 4-aminobutyrate degradation
Metabolic module: MF0076

GCA_000152145.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000152145.1 (Pathway)
Pathway: Hydrogen metabolism
Metabolic module: MF0098

GCA_000152145.1 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_000152145.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.1

GCA_000152145.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.11

GCA_000152145.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000152145.1 (MAGs)
MAGs: no MAG matches found