GCA_000146855.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Anaerostipes caccae
Comparison to close relatives: Clostridium colinum
Comparison to close relatives: Anaerosacchariphilus polymeriproducens
Comparison to close relatives: Thermotalea metallivorans
Comparison to close relatives: Faecalicatena contorta
Comparison to close relatives: Crassaminicella indica
Comparison to close relatives: Filifactor villosus
Comparison to close relatives: Crassaminicella profunda
Comparison to close relatives: Gudongella oleilytica
Comparison to close relatives: Clostridium formicaceticum
Comparison to close relatives: Tindallia texcoconensis
Comparison to close relatives: Anaerosporobacter faecicola
Comparison to close relatives: Anaeropeptidivorans aminofermentans
Comparison to close relatives: Soehngenia saccharolytica
Comparison to close relatives: Anoxynatronum buryatiense
Comparison to close relatives: Eubacterium yurii subsp. schtitka
Comparison to close relatives: Blautia hydrogenotrophica
Comparison to close relatives: Fusibacter fontis
Comparison to close relatives: Fusibacter bizertensis
Comparison to close relatives: Tissierella creatinini
Comparison to close relatives: Peptoclostridium acidaminophilum
Comparison to close relatives: Fusibacter paucivorans
Comparison to close relatives: Anaerovorax odorimutans
Comparison to close relatives: Tindallia californiensis
Comparison to close relatives: Parvimonas micra
Comparison to close relatives: Isachenkonia alkalipeptolytica
Comparison to close relatives: Anaerobium acetethylicum
Comparison to close relatives: Soehngenia longivitae
Comparison to close relatives: Acidaminobacter hydrogenoformans
Comparison to close relatives: Acetoanaerobium noterae
Comparison to close relatives: Natronincola ferrireducens
Comparison to close relatives: Fusibacter tunisiensis
Comparison to close relatives: Eubacterium yurii subsp. yurii
Comparison to close relatives: Anaeromicropila herbilytica
Comparison to close relatives: Acetoanaerobium pronyense
Comparison to close relatives: Clostridium populeti
Comparison to close relatives: Aminipila butyrica
Comparison to close relatives: Guggenheimella bovis
Comparison to close relatives: Criibacterium bergeronii
Comparison to close relatives: Alkaliphilus oremlandii
Comparison to close relatives: Eubacterium yurii subsp. margaretiae
Comparison to close relatives: Roseburia hominis
Comparison to close relatives: Peptoanaerobacter stomatis
Comparison to close relatives: Coprococcus comes
Comparison to close relatives: Dorea ammoniilytica
Comparison to close relatives: Anaerovirgula multivorans
Comparison to close relatives: Robinsoniella peoriensis
Comparison to close relatives: Acetoanaerobium sticklandii
Comparison to close relatives: Eubacterium saphenum
Comparison to close relatives: Proteocatella sphenisci
Comparison to close relatives: Eubacterium yurii
Comparison to close relatives: Anaeromicropila populeti
Carbon source: sucrose
Carbon source: starch
CAZyme: GH13
CAZyme: GH6
CAZyme: GH4
CAZyme: GH28
CAZyme: GH73
CAZyme: GH32
CAZyme: GH77
CAZyme: GH49
CAZyme: GH105
CAZyme: GH0
CAZyme: GH38
CAZyme: GH19
CAZyme: GH114
CAZyme: GH43
CAZyme: GH23
CAZyme: GT2
CAZyme: GT13
CAZyme: GT51
CAZyme: GT35
CAZyme: GT4
CAZyme: GT22
CAZyme: GT30

GCA_000146855.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000146855.1 (CAZyme)
CAZyme: GT28
Occurance: 6

GCA_000146855.1 (CAZyme)
CAZyme: GT0
Occurance: 2

GCA_000146855.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000146855.1 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_000146855.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_000146855.1 (CAZyme)
CAZyme: CBM50
Occurance: 11

GCA_000146855.1 (CAZyme)
CAZyme: CBM41
Occurance: 1

GCA_000146855.1 (CAZyme)
CAZyme: CBM48
Occurance: 3

GCA_000146855.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_000146855.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000146855.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_000146855.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000146855.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000146855.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000146855.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000146855.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000146855.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000146855.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000146855.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000146855.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000146855.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000146855.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000146855.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000146855.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000146855.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000146855.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000146855.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000146855.1 (Pathway)
Pathway: Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Metabolic module: M00526

GCA_000146855.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000146855.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000146855.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000146855.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000146855.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_000146855.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000146855.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000146855.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000146855.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000146855.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000146855.1 (Pathway)
Pathway: Starch degradation
Metabolic module: MF0005

GCA_000146855.1 (Pathway)
Pathway: Tryptophan degradation
Metabolic module: MF0025

GCA_000146855.1 (Pathway)
Pathway: Tyrosine degradation II
Metabolic module: MF0027

GCA_000146855.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000146855.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000146855.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000146855.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_000146855.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000146855.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000146855.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000146855.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_000146855.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 1.7
Relative abundance (%): 0.01

GCA_000146855.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.02

GCA_000146855.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.01

GCA_000146855.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000146855.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 26.6
Relative abundance (%): 0.2

GCA_000146855.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_000146855.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000146855.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 13.2
Relative abundance (%): 0.03

GCA_000146855.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_000146855.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 11.6
Relative abundance (%): 0.02

GCA_000146855.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.07

GCA_000146855.1 (MAGs)
MAGs: no MAG matches found