GCA_000043285.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Dickeya undicola
Comparison to close relatives: Pectobacterium fontis
Comparison to close relatives: Pectobacterium punjabense
Comparison to close relatives: Rouxiella badensis
Comparison to close relatives: Enterobacter pseudoroggenkampii
Comparison to close relatives: Pantoea allii
Comparison to close relatives: Chimaeribacter californicus
Comparison to close relatives: Serratia rubidaea
Comparison to close relatives: Symbiopectobacterium purcellii
Comparison to close relatives: Dickeya dadantii subsp. dadantii
Comparison to close relatives: Sodalis praecaptivus
Comparison to close relatives: Enterobacter chengduensis
Comparison to close relatives: Ewingella americana
Comparison to close relatives: Cedecea davisae
Comparison to close relatives: Pectobacterium actinidiae
Comparison to close relatives: Pectobacterium cacticida
Comparison to close relatives: Edwardsiella anguillarum
Comparison to close relatives: Enterobacter chuandaensis
Comparison to close relatives: Enterobacter dykesii
Comparison to close relatives: Enterobacter quasiroggenkampii
Comparison to close relatives: Cronobacter malonaticus
Comparison to close relatives: Enterobacter quasimori
Comparison to close relatives: Pectobacterium versatile
Comparison to close relatives: Serratia inhibens
Comparison to close relatives: Enterobacter hormaechei subsp. steigerwaltii
Comparison to close relatives: Edwardsiella ictaluri
Comparison to close relatives: Enterobacter quasihormaechei
Comparison to close relatives: Dickeya fangzhongdai
Comparison to close relatives: Serratia plymuthica
Comparison to close relatives: Kosakonia radicincitans
Comparison to close relatives: Enterobacter hormaechei subsp. hoffmannii
Comparison to close relatives: Enterobacter hormaechei subsp. xiangfangensis
Comparison to close relatives: Pseudocitrobacter vendiensis
Comparison to close relatives: Pectobacterium brasiliense
Comparison to close relatives: Serratia marcescens
Comparison to close relatives: Pectobacterium aroidearum
Comparison to close relatives: Pectobacterium wasabiae
Comparison to close relatives: Serratia ficaria
Comparison to close relatives: Cronobacter condimenti
Comparison to close relatives: Pectobacterium betavasculorum
Comparison to close relatives: Dickeya oryzae
Comparison to close relatives: Serratia entomophila
Comparison to close relatives: Serratia odorifera
Comparison to close relatives: Pectobacterium quasiaquaticum
Comparison to close relatives: Pectobacterium parmentieri
Comparison to close relatives: Dickeya lacustris
Comparison to close relatives: Dickeya parazeae
Comparison to close relatives: Pectobacterium polaris
Comparison to close relatives: Serratia liquefaciens
Comparison to close relatives: Providencia sneebia
Comparison to close relatives: Enterobacter hormaechei
Comparison to close relatives: Dickeya dadantii
Comparison to close relatives: Pectobacterium carotovorum
CAZyme: GH13
CAZyme: GH6
CAZyme: GH19
CAZyme: GH23
CAZyme: GT13
CAZyme: GT51
CAZyme: GT4
CAZyme: GT22
CAZyme: GT28
CAZyme: GT30
CAZyme: GT2
CAZyme: GT19
CAZyme: GT9
CAZyme: CE4
CAZyme: CE9
CAZyme: CE11
CAZyme: CBM20
CAZyme: CBM13
CAZyme: CBM50
CAZyme: CBM5
Pathway: Glycolysis, core module involving three-carbon compounds
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

GCA_000043285.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000043285.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000043285.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000043285.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000043285.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000043285.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000043285.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000043285.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000043285.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000043285.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000043285.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000043285.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000043285.1 (Pathway)
Pathway: Cytochrome o ubiquinol oxidase
Metabolic module: M00417

GCA_000043285.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000043285.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000043285.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_000043285.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_000043285.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_000043285.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000043285.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_000043285.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_000043285.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000043285.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000043285.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000043285.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000043285.1 (MAGs)
MAGs: no MAG matches found