GCA_000023725.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Kaistella soli
Comparison to close relatives: Chryseobacterium faecale
Comparison to close relatives: Epilithonimonas vandammei
Comparison to close relatives: Chryseobacterium hominis
Comparison to close relatives: Chryseobacterium treverense
Comparison to close relatives: Sejongia jeonii
Comparison to close relatives: Chryseobacterium solincola
Comparison to close relatives: Kaistella daneshvariae
Comparison to close relatives: Chryseobacterium montanum
Comparison to close relatives: Chryseobacterium salipaludis
Comparison to close relatives: Chryseobacterium anthropi
Comparison to close relatives: Chryseobacterium carnis
Comparison to close relatives: Chryseobacterium haifense
Comparison to close relatives: Chryseobacterium molle
Comparison to close relatives: Kaistella polysaccharea
Comparison to close relatives: Chryseobacterium kimseyorum
Comparison to close relatives: Chryseobacterium salivictor
Comparison to close relatives: Chryseobacterium arachidiradicis
Comparison to close relatives: Chryseobacterium aquaeductus
Comparison to close relatives: Marnyiella aurantia
Comparison to close relatives: Chryseobacterium scophthalmum
Comparison to close relatives: Chryseobacterium edaphi
Comparison to close relatives: Chryseobacterium pallidum
Comparison to close relatives: Chryseobacterium palustre
Comparison to close relatives: Chryseobacterium zeae
Comparison to close relatives: Kaistella gelatinilytica
Comparison to close relatives: Chryseobacterium lecithinasegens
Comparison to close relatives: Chryseobacterium polytrichastri
Comparison to close relatives: Chryseobacterium formosense
Comparison to close relatives: Chryseobacterium schmidteae
Comparison to close relatives: Chryseobacterium aquaticum subsp. greenlandense
Comparison to close relatives: Chryseobacterium aureum
Comparison to close relatives: Chryseobacterium piscium
Comparison to close relatives: Chryseobacterium humi
Comparison to close relatives: Chryseobacterium luquanense
Comparison to close relatives: Chryseobacterium wanjuense
Comparison to close relatives: Chryseobacterium xinjiangense
Comparison to close relatives: Chryseobacterium ureilyticum
Comparison to close relatives: Chryseobacterium paludis
Comparison to close relatives: Chryseobacterium potabilaquae
Comparison to close relatives: Chryseobacterium fistulae
Comparison to close relatives: Chryseobacterium populi
Comparison to close relatives: Chryseobacterium gleum
Comparison to close relatives: Chryseobacterium bovis
Comparison to close relatives: Chryseobacterium tenax
Comparison to close relatives: Chryseobacterium piperi
Comparison to close relatives: Chryseobacterium halperniae
Comparison to close relatives: Chryseobacterium taiwanense
Comparison to close relatives: Chryseobacterium gallinarum
Comparison to close relatives: Chryseobacterium kwangjuense
Comparison to close relatives: Kaistella faecalis
Comparison to close relatives: Kaistella haifensis
Comparison to close relatives: Kaistella montana
Comparison to close relatives: Kaistella carnis
Comparison to close relatives: Kaistella solincola
Comparison to close relatives: Kaistella palustris
Comparison to close relatives: Kaistella treverensis
Comparison to close relatives: Kaistella jeonii
Comparison to close relatives: Epilithonimonas mollis
Comparison to close relatives: Epilithonimonas arachidiradicis
Comparison to close relatives: Epilithonimonas zeae
Comparison to close relatives: Halpernia humi
Comparison to close relatives: Epilithonimonas bovis
Comparison to close relatives: Epilithonimonas tenax
Comparison to close relatives: Epilithonimonas hominis
Comparison to close relatives: Epilithonimonas pallida
Comparison to close relatives: Epilithonimonas lactis
Comparison to close relatives: Chryseobacterium aquaticum
Carbon source: starch
CAZyme: GH13
CAZyme: GH35
CAZyme: GH77
CAZyme: GH0
CAZyme: GH6
CAZyme: GH115
CAZyme: GH3

GCA_000023725.1 (CAZyme)
CAZyme: GH92
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH163
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH97
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: GH65
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: GH67
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH28
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: GH11
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH43
Occurance: 6

GCA_000023725.1 (CAZyme)
CAZyme: GH144
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: GH105
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: GH10
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH73
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH2
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH19
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: GH114
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH25
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH16
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GH23
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT2
Occurance: 43

GCA_000023725.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: GT5
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: GT4
Occurance: 31

GCA_000023725.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_000023725.1 (CAZyme)
CAZyme: GT32
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT0
Occurance: 5

GCA_000023725.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: GT8
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: PL1
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: PL10
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: CE8
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: CE11
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: CE14
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: CE1
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: CBM5
Occurance: 5

GCA_000023725.1 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: CBM50
Occurance: 12

GCA_000023725.1 (CAZyme)
CAZyme: CBM20
Occurance: 3

GCA_000023725.1 (CAZyme)
CAZyme: CBM77
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: CBM9
Occurance: 1

GCA_000023725.1 (CAZyme)
CAZyme: CBM48
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: CBM13
Occurance: 2

GCA_000023725.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000023725.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_000023725.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000023725.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000023725.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000023725.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000023725.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000023725.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000023725.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000023725.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000023725.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000023725.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000023725.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000023725.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000023725.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000023725.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000023725.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000023725.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000023725.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000023725.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000023725.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000023725.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000023725.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000023725.1 (Pathway)
Pathway: Cytochrome c oxidase, cbb3-type
Metabolic module: M00156

GCA_000023725.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_000023725.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_000023725.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000023725.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000023725.1 (Pathway)
Pathway: D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P
Metabolic module: M00631

GCA_000023725.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000023725.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000023725.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000023725.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000023725.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000023725.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_000023725.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_000023725.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_000023725.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000023725.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_000023725.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000023725.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000023725.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000023725.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000023725.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000023725.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000023725.1 (Pathway)
Pathway: Galacturonate degradation I
Metabolic module: MF0022

GCA_000023725.1 (Pathway)
Pathway: Tryptophan degradation
Metabolic module: MF0025

GCA_000023725.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000023725.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_000023725.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000023725.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000023725.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000023725.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_000023725.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000023725.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_000023725.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000023725.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000023725.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_000023725.1 (Pathway)
Pathway: Glycolysis (preparatory phase)
Metabolic module: MF0067

GCA_000023725.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000023725.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000023725.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000023725.1 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_000023725.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 6.6
Relative abundance (%): 0.3

GCA_000023725.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.01

GCA_000023725.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.05

GCA_000023725.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 10.5
Relative abundance (%): 0.71

GCA_000023725.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 2.5
Relative abundance (%): 0.23

GCA_000023725.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 10.6
Relative abundance (%): 0.03

GCA_000023725.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 5
Relative abundance (%): 0.02

GCA_000023725.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.02

GCA_000023725.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 5.6
Relative abundance (%): 0.41

GCA_000023725.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 6.3
Relative abundance (%): 0.08

GCA_000023725.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.05

GCA_000023725.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 19.3
Relative abundance (%): 0.11

GCA_000023725.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 28.7
Relative abundance (%): 0.06

GCA_000023725.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 13.5
Relative abundance (%): 0.06

GCA_000023725.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2.9
Relative abundance (%): 0.04

GCA_000023725.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 1
Relative abundance (%): 0.05

GCA_000023725.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 4.4
Relative abundance (%): 0.24

GCA_000023725.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 8.2
Relative abundance (%): 1.11

GCA_000023725.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.13

GCA_000023725.1 (MAGs)
MAGs: no MAG matches found