GCA_000012145.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Rickettsia felis
Comparison to close relatives: Rickettsia gravesii
Comparison to close relatives: Rickettsia asembonensis
Comparison to close relatives: Rickettsia australis
Comparison to close relatives: Rickettsia massiliae
Comparison to close relatives: Rickettsia rhipicephali
Comparison to close relatives: Rickettsia slovaca
Comparison to close relatives: Rickettsia conorii subsp. raoultii
Comparison to close relatives: Rickettsia bellii
Comparison to close relatives: Rickettsia conorii subsp. conorii
Comparison to close relatives: Rickettsia japonica
Comparison to close relatives: Rickettsia sibirica
Comparison to close relatives: Rickettsia tamurae subsp. tamurae
Comparison to close relatives: Rickettsia parkeri
Comparison to close relatives: Rickettsia honei
Comparison to close relatives: Rickettsia conorii subsp. israelensis
Comparison to close relatives: Rickettsia aeschlimannii
Comparison to close relatives: Rickettsia monacensis
Comparison to close relatives: Rickettsia peacockii
Comparison to close relatives: Rickettsia rickettsii
Comparison to close relatives: Rickettsia montanensis
Comparison to close relatives: Rickettsia heilongjiangensis
Comparison to close relatives: Rickettsia tamurae subsp. buchneri
Comparison to close relatives: Rickettsia conorii subsp. indica
Comparison to close relatives: Rickettsia asiatica
Comparison to close relatives: Rickettsia akari
Comparison to close relatives: Rickettsia canadensis
Comparison to close relatives: Rickettsia typhi
Comparison to close relatives: Rickettsia prowazekii
Comparison to close relatives: Rickettsia tillamookensis
Comparison to close relatives: Occidentia massiliensis
Comparison to close relatives: Orientia tsutsugamushi
Comparison to close relatives: Gimibacter soli
Comparison to close relatives: Chelativorans intermedius
Comparison to close relatives: Luteithermobacter gelatinilyticus
Comparison to close relatives: Mesorhizobium amorphae
Comparison to close relatives: Mesorhizobium norvegicum
Comparison to close relatives: Mesorhizobium comanense
Comparison to close relatives: Bartonella kosoyi
Comparison to close relatives: Oricola indica
Comparison to close relatives: Kordiimonas marina
Comparison to close relatives: Ensifer alkalisoli
Comparison to close relatives: Mesorhizobium loti
Comparison to close relatives: Mesorhizobium atlanticum
Comparison to close relatives: Mesorhizobium jarvisii
Comparison to close relatives: Phyllobacterium calauticae
Comparison to close relatives: Hoeflea phototrophica
Comparison to close relatives: Mesorhizobium alhagi
Comparison to close relatives: Ahrensia marina
Comparison to close relatives: Pseudemcibacter aquimaris
Comparison to close relatives: Rickettsia tamurae
Comparison to close relatives: Rickettsia conorii
Comparison to close relatives: Sinorhizobium alkalisoli
CAZyme: GH13
CAZyme: GH6
CAZyme: GH23
CAZyme: GH65
CAZyme: GH28
CAZyme: GH101
CAZyme: GH18
CAZyme: GH0
CAZyme: GH3
CAZyme: GH33
CAZyme: GH24
CAZyme: GT13
CAZyme: GT51
CAZyme: GT2
CAZyme: GT4
CAZyme: GT8
CAZyme: GT41
CAZyme: GT28
CAZyme: GT30
CAZyme: GT32
CAZyme: GT1
CAZyme: GT19
CAZyme: GT0

GCA_000012145.1 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_000012145.1 (CAZyme)
CAZyme: CE11
Occurance: 2

GCA_000012145.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_000012145.1 (CAZyme)
CAZyme: CBM13
Occurance: 2

GCA_000012145.1 (CAZyme)
CAZyme: CBM50
Occurance: 3

GCA_000012145.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000012145.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000012145.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000012145.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000012145.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000012145.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000012145.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000012145.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000012145.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000012145.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_000012145.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000012145.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000012145.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000012145.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000012145.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_000012145.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000012145.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000012145.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000012145.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 4
Relative abundance (%): 0.28

GCA_000012145.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000012145.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.05

GCA_000012145.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 19
Relative abundance (%): 0.02

GCA_000012145.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.03

GCA_000012145.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 1.6
Relative abundance (%): 0

GCA_000012145.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000012145.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_000012145.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 10.6
Relative abundance (%): 0.06

GCA_000012145.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 8.7
Relative abundance (%): 0.01

GCA_000012145.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000012145.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 12.9
Relative abundance (%): 0.01

GCA_000012145.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 7.1
Relative abundance (%): 0.02

GCA_000012145.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 17.5
Relative abundance (%): 0

GCA_000012145.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.01

GCA_000012145.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.98

GCA_000012145.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000012145.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.03

GCA_000012145.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000012145.1 (MAGs)
MAGs: no MAG matches found