GCF_000213805.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Pseudomonas argentinensis
Comparison to close relatives: Pseudomonas flavescens
Comparison to close relatives: Pseudomonas straminea
Comparison to close relatives: Pseudomonas juntendi
Comparison to close relatives: Pseudomonas punonensis
Comparison to close relatives: Pseudomonas asiatica
Comparison to close relatives: Pseudomonas inefficax
Comparison to close relatives: Pseudomonas muyukensis
Comparison to close relatives: Pseudomonas monteilii
Comparison to close relatives: Pseudomonas xanthosomatis
Comparison to close relatives: Pseudomonas fakonensis
Comparison to close relatives: Pseudomonas xantholysinigenes
Comparison to close relatives: Pseudomonas plecoglossicida
Comparison to close relatives: Pseudomonas kermanshahensis
Comparison to close relatives: Pseudomonas urmiensis
Comparison to close relatives: Pseudomonas peradeniyensis
Comparison to close relatives: Pseudomonas mosselii
Comparison to close relatives: Pseudomonas hydrolytica
Comparison to close relatives: Pseudomonas shirazensis
Comparison to close relatives: Pseudomonas sichuanensis
Comparison to close relatives: Pseudomonas farsensis
Comparison to close relatives: Pseudomonas benzenivorans
Comparison to close relatives: Pseudomonas entomophila
Comparison to close relatives: Pseudomonas mendocina
Comparison to close relatives: Pseudomonas maumuensis
Comparison to close relatives: Pseudomonas khorasanensis
Comparison to close relatives: Pseudomonas reidholzensis
Comparison to close relatives: Pseudomonas oryzihabitans
Comparison to close relatives: Pseudomonas tensinigenes
Comparison to close relatives: Pseudomonas triticicola
Comparison to close relatives: Pseudomonas hamedanensis
Comparison to close relatives: Pseudomonas siliginis
Comparison to close relatives: Pseudomonas defluvii
Comparison to close relatives: Pseudomonas zeae
Comparison to close relatives: Pseudomonas vanderleydeniana
Comparison to close relatives: Pseudomonas chengduensis
Comparison to close relatives: Pseudomonas putida
Comparison to close relatives: Pseudomonas tohonis
Comparison to close relatives: Pseudomonas azerbaijanorientalis
Comparison to close relatives: Pseudomonas iranensis
Comparison to close relatives: Pseudomonas huaxiensis
Comparison to close relatives: Pseudomonas allokribbensis
Comparison to close relatives: Pseudomonas atacamensis
Comparison to close relatives: Pseudomonas graminis
Comparison to close relatives: Pseudomonas glycinae
Comparison to close relatives: Pseudomonas gozinkensis
Comparison to close relatives: Pseudomonas baltica
Comparison to close relatives: Pseudomonas arcuscaelestis
Comparison to close relatives: Pseudomonas laurylsulfatiphila
Comparison to close relatives: Pseudomonas lutea
Comparison to close relatives: Pseudomonas fulva B
Carbon source: starch
Carbon source: cellulose
CAZyme: GH33
CAZyme: GH43
CAZyme: GH105
CAZyme: GH3
CAZyme: GH73
CAZyme: GH6
CAZyme: GH5
CAZyme: GH104
CAZyme: GH23
CAZyme: GH0
CAZyme: GH28
CAZyme: GH1
CAZyme: GH101
CAZyme: GH13
CAZyme: GH65
CAZyme: GH19
CAZyme: GH17
CAZyme: GH94
CAZyme: GH16
CAZyme: GH77
CAZyme: GH71
CAZyme: GH15
CAZyme: GH36

GCF_000213805.1 (CAZyme)
CAZyme: GH50
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GH135
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GH103
Occurance: 3

GCF_000213805.1 (CAZyme)
CAZyme: GH108
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GH114
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT1
Occurance: 20

GCF_000213805.1 (CAZyme)
CAZyme: GT2
Occurance: 25

GCF_000213805.1 (CAZyme)
CAZyme: GT51
Occurance: 4

GCF_000213805.1 (CAZyme)
CAZyme: GT0
Occurance: 4

GCF_000213805.1 (CAZyme)
CAZyme: GT5
Occurance: 2

GCF_000213805.1 (CAZyme)
CAZyme: GT4
Occurance: 25

GCF_000213805.1 (CAZyme)
CAZyme: GT28
Occurance: 5

GCF_000213805.1 (CAZyme)
CAZyme: GT26
Occurance: 3

GCF_000213805.1 (CAZyme)
CAZyme: GT84
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT104
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT41
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: GT9
Occurance: 3

GCF_000213805.1 (CAZyme)
CAZyme: PL12
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: PL0
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: PL5
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: CE11
Occurance: 6

GCF_000213805.1 (CAZyme)
CAZyme: CE14
Occurance: 3

GCF_000213805.1 (CAZyme)
CAZyme: CBM50
Occurance: 18

GCF_000213805.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: CBM41
Occurance: 4

GCF_000213805.1 (CAZyme)
CAZyme: CBM13
Occurance: 4

GCF_000213805.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: CBM56
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCF_000213805.1 (CAZyme)
CAZyme: CBM48
Occurance: 7

GCF_000213805.1 (CAZyme)
CAZyme: CBM20
Occurance: 2

GCF_000213805.1 (Pathway)
Pathway: trehalose degradation ii
Metabolic module: mf0012

GCF_000213805.1 (Pathway)
Pathway: fructose degradation
Metabolic module: mf0015

GCF_000213805.1 (Pathway)
Pathway: mannose degradation
Metabolic module: mf0018

GCF_000213805.1 (Pathway)
Pathway: ribose degradation
Metabolic module: mf0020

GCF_000213805.1 (Pathway)
Pathway: galacturonate degradation ii
Metabolic module: mf0023

GCF_000213805.1 (Pathway)
Pathway: aspartate degradation ii
Metabolic module: mf0029

GCF_000213805.1 (Pathway)
Pathway: alanine degradation i
Metabolic module: mf0033

GCF_000213805.1 (Pathway)
Pathway: alanine degradation ii
Metabolic module: mf0034

GCF_000213805.1 (Pathway)
Pathway: glycine degradation
Metabolic module: mf0035

GCF_000213805.1 (Pathway)
Pathway: isoleucine degradation
Metabolic module: mf0036

GCF_000213805.1 (Pathway)
Pathway: leucine degradation
Metabolic module: mf0037

GCF_000213805.1 (Pathway)
Pathway: methionine degradation i
Metabolic module: mf0038

GCF_000213805.1 (Pathway)
Pathway: proline degradation
Metabolic module: mf0040

GCF_000213805.1 (Pathway)
Pathway: glutamine degradation i
Metabolic module: mf0046

GCF_000213805.1 (Pathway)
Pathway: glutamine degradation ii
Metabolic module: mf0047

GCF_000213805.1 (Pathway)
Pathway: serine degradation
Metabolic module: mf0048

GCF_000213805.1 (Pathway)
Pathway: arginine degradation i
Metabolic module: mf0051

GCF_000213805.1 (Pathway)
Pathway: arginine degradation ii
Metabolic module: mf0052

GCF_000213805.1 (Pathway)
Pathway: histidine degradation
Metabolic module: mf0056

GCF_000213805.1 (Pathway)
Pathway: entner-doudoroff pathway
Metabolic module: mf0066

GCF_000213805.1 (Pathway)
Pathway: pentose phosphate pathway (non-oxidative branch)
Metabolic module: mf0071

GCF_000213805.1 (Pathway)
Pathway: pyruvate dehydrogenase complex
Metabolic module: mf0072

GCF_000213805.1 (Pathway)
Pathway: acetate to acetyl-coa
Metabolic module: mf0075

GCF_000213805.1 (Pathway)
Pathway: 4-aminobutyrate degradation
Metabolic module: mf0076

GCF_000213805.1 (Pathway)
Pathway: urea degradation
Metabolic module: mf0085

GCF_000213805.1 (Pathway)
Pathway: acetyl-coa to acetate
Metabolic module: mf0086

GCF_000213805.1 (Pathway)
Pathway: acetyl-coa to crotonyl-coa
Metabolic module: mf0087

GCF_000213805.1 (Pathway)
Pathway: lactate production
Metabolic module: mf0092

GCF_000213805.1 (Ecosystem)
Ecosystem: Wastewater metagenome
Prevalence (%): 62.6
Relative abundance (%): 0.71

GCF_000213805.1 (Ecosystem)
Ecosystem: Activated sludge metagenome
Prevalence (%): 60.7
Relative abundance (%): 0.34

GCF_000213805.1 (Ecosystem)
Ecosystem: Human lung metagenome
Prevalence (%): 15.8
Relative abundance (%): 1.41

GCF_000213805.1 (Ecosystem)
Ecosystem: Chicken gut metagenome
Prevalence (%): 26.5
Relative abundance (%): 0.48

GCF_000213805.1 (Ecosystem)
Ecosystem: Bovine gut metagenome
Prevalence (%): 19.9
Relative abundance (%): 1.36

GCF_000213805.1 (Ecosystem)
Ecosystem: Human oral metagenome
Prevalence (%): 8
Relative abundance (%): 0.26

GCF_000213805.1 (Ecosystem)
Ecosystem: Human vaginal metagenome
Prevalence (%): 25
Relative abundance (%): 0.24

GCF_000213805.1 (Ecosystem)
Ecosystem: Freshwater metagenome
Prevalence (%): 60
Relative abundance (%): 2.9

GCF_000213805.1 (Ecosystem)
Ecosystem: Rhizosphere metagenome
Prevalence (%): 73.4
Relative abundance (%): 12.8

GCF_000213805.1 (Ecosystem)
Ecosystem: Marine sediment metagenome
Prevalence (%): 39.3
Relative abundance (%): 0.73

GCF_000213805.1 (Ecosystem)
Ecosystem: Pig gut metagenome
Prevalence (%): 31
Relative abundance (%): 0.15

GCF_000213805.1 (Ecosystem)
Ecosystem: Soil metagenome
Prevalence (%): 55.1
Relative abundance (%): 1.12

GCF_000213805.1 (Ecosystem)
Ecosystem: Mouse gut metagenome
Prevalence (%): 11
Relative abundance (%): 0.09

GCF_000213805.1 (Ecosystem)
Ecosystem: Coral metagenome
Prevalence (%): 44.2
Relative abundance (%): 1.04

GCF_000213805.1 (Ecosystem)
Ecosystem: Human skin metagenome
Prevalence (%): 46.8
Relative abundance (%): 0.6

GCF_000213805.1 (Ecosystem)
Ecosystem: Plant metagenome
Prevalence (%): 65.3
Relative abundance (%): 1.97

GCF_000213805.1 (Ecosystem)
Ecosystem: Human gut metagenome
Prevalence (%): 16.1
Relative abundance (%): 0.24

GCF_000213805.1 (Ecosystem)
Ecosystem: Marine metagenome
Prevalence (%): 24.1
Relative abundance (%): 0.6

GCF_000213805.1 (Ecosystem)
Ecosystem: Insect gut metagenome
Prevalence (%): 35.5
Relative abundance (%): 0.63

GCF_000213805.1 (MAGs)
MAGs: no MAG matches found