GCA_028561875.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanofervidicoccus abyssi
Comparison to close relatives: Methanococcoides alaskense
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Ferroplasma acidiphilum
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanolobus psychrotolerans
Comparison to close relatives: Acidiplasma cupricumulans
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanonatronarchaeum thermophilum
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanospirillum hungatei
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanoculleus thermophilus
Comparison to close relatives: Methanolinea mesophila
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Methanoculleus taiwanensis
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanoculleus palmolei
Comparison to close relatives: Methanoregula formicica
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Acidiplasma aeolicum
CAZyme: GH28
CAZyme: GH19
CAZyme: GT66
CAZyme: GT7
CAZyme: GT13
CAZyme: GT2
CAZyme: GT4
CAZyme: GT1
CAZyme: CBM50
CAZyme: CBM13
CAZyme: CBM5
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Pathway: Cysteine biosynthesis, serine => cysteine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Pathway: C10-C20 isoprenoid biosynthesis, archaea
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Pathway: Arginine biosynthesis, ornithine => arginine
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P

GCA_028561875.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_028561875.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_028561875.1 (Pathway)
Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Metabolic module: M00968

GCA_028561875.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_028561875.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_028561875.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_028561875.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_028561875.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_028561875.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_028561875.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_028561875.1 (Pathway)
Pathway: Methanol conversion
Metabolic module: MF0081

GCA_028561875.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_028561875.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_028561875.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.04

GCA_028561875.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 2.9
Relative abundance (%): 0.03

GCA_028561875.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_028561875.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.02

GCA_028561875.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028561875.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_028561875.1 (MAGs)
MAGs: no MAG matches found