GCA_028289805.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanolinea mesophila
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Methanofervidicoccus abyssi
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanocaldococcus vulcanius
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanothermus sociabilis
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanocaldococcus bathoardescens
Comparison to close relatives: Methanocaldococcus fervens
Comparison to close relatives: Archaeoglobus infectus
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Methanococcus vannielii
Comparison to close relatives: Methanococcus aeolicus
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanothermus fervidus
Comparison to close relatives: Methanospirillum hungatei
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Archaeoglobus sulfaticallidus
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanofollis liminatans
Comparison to close relatives: Methanoculleus taiwanensis
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanonatronarchaeum thermophilum
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Methanogenium marinum
Comparison to close relatives: Methanogenium cariaci
Comparison to close relatives: Methanogenium frigidum
Comparison to close relatives: Methanoplanus endosymbiosus
Comparison to close relatives: Acidiplasma cupricumulans
CAZyme: GH101
CAZyme: GH109
CAZyme: GH0
CAZyme: GH43
CAZyme: GT7
CAZyme: GT13
CAZyme: GT2
CAZyme: GT66
CAZyme: GT4
CAZyme: GT51
CAZyme: CE4
CAZyme: CBM50
CAZyme: CBM13
CAZyme: CBM5
CAZyme: CBM6
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Proline biosynthesis, glutamate => proline
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: beta-Oxidation, acyl-CoA synthesis
Pathway: Acylglycerol degradation
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc

GCA_028289805.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_028289805.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_028289805.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_028289805.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_028289805.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_028289805.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_028289805.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_028289805.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.04

GCA_028289805.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.02

GCA_028289805.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028289805.1 (MAGs)
MAGs: no MAG matches found