GCA_028279585.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanolobus taylorii
Comparison to close relatives: Methanolobus oregonensis
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanosarcina soligelidi
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methanolobus chelungpuianus
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanolobus psychrotolerans
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanolobus vulcani
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanosarcina acetivorans
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanosarcina barkeri
Comparison to close relatives: Methanosarcina flavescens
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanosarcina lacustris
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Methanoculleus palmolei
Comparison to close relatives: Methanoculleus hydrogenitrophicus
Comparison to close relatives: Methanoculleus thermophilus
CAZyme: GH97
CAZyme: GH13
CAZyme: GH101
CAZyme: GH105
CAZyme: GH0
CAZyme: GH109
CAZyme: GH19
CAZyme: GH43
CAZyme: GT66
CAZyme: GT2
CAZyme: GT7
CAZyme: GT22
CAZyme: GT5
CAZyme: GT4
CAZyme: GT0
CAZyme: CBM5
CAZyme: CBM50
CAZyme: CBM13
CAZyme: CBM48
Pathway: Glycolysis, core module involving three-carbon compounds
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Cysteine biosynthesis, serine => cysteine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Triacylglycerol biosynthesis

GCA_028279585.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_028279585.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_028279585.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_028279585.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_028279585.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_028279585.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_028279585.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_028279585.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_028279585.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_028279585.1 (Pathway)
Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Metabolic module: M01014

GCA_028279585.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_028279585.1 (Pathway)
Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Metabolic module: M00968

GCA_028279585.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_028279585.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_028279585.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_028279585.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_028279585.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_028279585.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_028279585.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.07

GCA_028279585.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 1.29

GCA_028279585.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_028279585.1 (MAGs)
MAGs: no MAG matches found