GCF_013839425.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Halorhabdus rudnickae
Comparison to close relatives: Halorhabdus utahensis
Comparison to close relatives: Halorhabdus tiamatea
Comparison to close relatives: Halapricum desulfuricans
Comparison to close relatives: Halorientalis marina
Comparison to close relatives: Halomicrobium mukohataei
Comparison to close relatives: Halosimplex litoreum
Comparison to close relatives: Halococcoides cellulosivorans
Comparison to close relatives: Halomicrobium zhouii
Comparison to close relatives: Salinibaculum litoreum
Comparison to close relatives: Halapricum salinum
Comparison to close relatives: Haloarcula terrestris
Comparison to close relatives: Halodesulfurarchaeum formicicum
Comparison to close relatives: Haloarcula mannanilytica
Comparison to close relatives: Halovenus rubra
Comparison to close relatives: Halorientalis brevis
Comparison to close relatives: Salinirussus salinus
Comparison to close relatives: Halorussus salilacus
Comparison to close relatives: Halorussus halobius
Comparison to close relatives: Halorientalis pallida
Comparison to close relatives: Halomicroarcula rubra
Comparison to close relatives: Haloarcula sebkhae
Comparison to close relatives: Halocatena pleomorpha
Comparison to close relatives: Halorientalis regularis
Comparison to close relatives: Halobacterium zhouii
Comparison to close relatives: Halorarius halobius
Comparison to close relatives: Haloarcula tradensis
Comparison to close relatives: Halorientalis persicus
Comparison to close relatives: Halorientalis litorea
Comparison to close relatives: Halosimplex salinum
Comparison to close relatives: Halocatena salina
Comparison to close relatives: Halobacterium noricense
Comparison to close relatives: Halomarina oriensis
Comparison to close relatives: Natronomonas marina
Comparison to close relatives: Halorientalis salina
Comparison to close relatives: Halomicroarcula laminariae
Comparison to close relatives: Halomarina salina
Comparison to close relatives: Halobacterium wangiae
Comparison to close relatives: Halorussus litoreus
Comparison to close relatives: Halomicroarcula marina
Comparison to close relatives: Halomicroarcula pellucida
Comparison to close relatives: Actinarchaeum halophilum
Comparison to close relatives: Halobacterium rubrum
Comparison to close relatives: Halobacterium jilantaiense
Comparison to close relatives: Halorarius litoreus
Comparison to close relatives: Saliphagus infecundisoli
Comparison to close relatives: Halobacterium salinarum
Comparison to close relatives: Haloglomus salinum
Comparison to close relatives: Haloglomus halophilum
Comparison to close relatives: Halomicrobium katesii
Comparison to close relatives: Haloarcula pellucida
Comparison to close relatives: Haloarcula rubra
Comparison to close relatives: Haloarcula marina
Comparison to close relatives: Haloarcula laminariae
Carbon source: starch
CAZyme: GH81
CAZyme: GH161
CAZyme: GH94
CAZyme: GH31
CAZyme: GH2
CAZyme: GH3
CAZyme: GH13
CAZyme: GH42
CAZyme: GH0
CAZyme: GH32
CAZyme: GH77
CAZyme: GH4
CAZyme: GH27
CAZyme: GH28
CAZyme: GH19
CAZyme: GH16
CAZyme: GH105
CAZyme: GT66
CAZyme: GT4
CAZyme: GT2
CAZyme: GT35

GCF_013839425.1 (CAZyme)
CAZyme: GT75
Occurance: 1

GCF_013839425.1 (CAZyme)
CAZyme: GT81
Occurance: 1

GCF_013839425.1 (CAZyme)
CAZyme: GT51
Occurance: 1

GCF_013839425.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCF_013839425.1 (CAZyme)
CAZyme: CE9
Occurance: 2

GCF_013839425.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCF_013839425.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCF_013839425.1 (CAZyme)
CAZyme: CBM50
Occurance: 4

GCF_013839425.1 (CAZyme)
CAZyme: CBM2
Occurance: 2

GCF_013839425.1 (CAZyme)
CAZyme: CBM5
Occurance: 3

GCF_013839425.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCF_013839425.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCF_013839425.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCF_013839425.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCF_013839425.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCF_013839425.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCF_013839425.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCF_013839425.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCF_013839425.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCF_013839425.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCF_013839425.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCF_013839425.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCF_013839425.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCF_013839425.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCF_013839425.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCF_013839425.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCF_013839425.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCF_013839425.1 (Pathway)
Pathway: F420 biosynthesis, archaea
Metabolic module: M00378

GCF_013839425.1 (Pathway)
Pathway: Assimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00531

GCF_013839425.1 (Pathway)
Pathway: UDP-Gal biosynthesis, Gal => UDP-Gal
Metabolic module: M00554

GCF_013839425.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCF_013839425.1 (Pathway)
Pathway: Ornithine biosynthesis, mediated by LysW, glutamate => ornithine
Metabolic module: M00763

GCF_013839425.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCF_013839425.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCF_013839425.1 (Pathway)
Pathway: Sulfur reduction, sulfur => sulfide
Metabolic module: M00986

GCF_013839425.1 (Pathway)
Pathway: Bacterioruberin biosynthesis, lycopene => bacterioruberin
Metabolic module: M01041

GCF_013839425.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCF_013839425.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCF_013839425.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCF_013839425.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCF_013839425.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCF_013839425.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCF_013839425.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCF_013839425.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCF_013839425.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCF_013839425.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCF_013839425.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCF_013839425.1 (Pathway)
Pathway: Glycerol degradation II
Metabolic module: MF0061

GCF_013839425.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCF_013839425.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCF_013839425.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCF_013839425.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCF_013839425.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.07

GCF_013839425.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_013839425.1 (MAGs)
MAGs: no MAG matches found