GCA_017468935.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Acidiplasma aeolicum
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Acidiplasma cupricumulans
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanolobus chelungpuianus
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Ferroplasma acidiphilum
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanococcoides alaskense
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanoculleus thermophilus
Comparison to close relatives: Methanolobus psychrotolerans
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanococcus vannielii
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanococcus aeolicus
Comparison to close relatives: Methanolobus vulcani
CAZyme: GH13
CAZyme: GH28
CAZyme: GH19
CAZyme: GT66
CAZyme: GT7
CAZyme: GT13
CAZyme: GT4
CAZyme: GT2
CAZyme: GT1
CAZyme: CE4
CAZyme: CBM50
CAZyme: CBM48
CAZyme: CBM13
CAZyme: CBM5
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Proline biosynthesis, glutamate => proline
Pathway: Cysteine biosynthesis, serine => cysteine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Pathway: C10-C20 isoprenoid biosynthesis, archaea

GCA_017468935.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_017468935.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_017468935.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_017468935.1 (Pathway)
Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Metabolic module: M00968

GCA_017468935.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_017468935.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_017468935.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_017468935.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_017468935.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_017468935.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_017468935.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_017468935.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_017468935.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_017468935.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_017468935.1 (Pathway)
Pathway: Methanol conversion
Metabolic module: MF0081

GCA_017468935.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_017468935.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.02

GCA_017468935.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_017468935.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 9
Relative abundance (%): 0.22

GCA_017468935.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.03

GCA_017468935.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_017468935.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.9
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 1.8
Relative abundance (%): 0.1

GCA_017468935.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.1

GCA_017468935.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 22.2
Relative abundance (%): 0.35

GCA_017468935.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_017468935.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.14

GCA_017468935.1 (MAGs)
MAGs: GCA_017468935.1_ASM1746893v1_genomic.fna
Ecosystem: Ruminants