GCF_000242875.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Nitrosopumilus ureiphilus
Comparison to close relatives: Nitrosopumilus cobalaminigenes
Comparison to close relatives: Nitrosopumilus adriaticus
Comparison to close relatives: Nitrosopumilus piranensis
Comparison to close relatives: Nitrosopumilus oxyclinae
Comparison to close relatives: Nitrososphaera viennensis
Comparison to close relatives: Methylophilus flavus
Comparison to close relatives: Sulfuricella denitrificans
Comparison to close relatives: Methylophilus aquaticus
Comparison to close relatives: Chromobacterium phragmitis
Comparison to close relatives: Chromobacterium paludis
Comparison to close relatives: Aquitalea pelogenes
Comparison to close relatives: Formivibrio citricus
Comparison to close relatives: Aquitalea magnusonii
Comparison to close relatives: Novimethylophilus kurashikiensis
Comparison to close relatives: Methylobacillus arboreus
Comparison to close relatives: Pseudomethylobacillus aquaticus
Comparison to close relatives: Methylophilus methylotrophus
Comparison to close relatives: Nitrosarchaeum koreense
Comparison to close relatives: Methylophilus leisingeri
Comparison to close relatives: Eikenella longinqua
Comparison to close relatives: Methylovorus mays
Comparison to close relatives: Chitinibacter tainanensis
Comparison to close relatives: Chromobacterium sinusclupearum
Comparison to close relatives: Methylotenera oryzisoli
Comparison to close relatives: Azospira restricta
Comparison to close relatives: Methylophilus rhizosphaerae
Comparison to close relatives: Methylophilus glucosoxydans
Comparison to close relatives: Nitrosopumilus zosterae
Comparison to close relatives: Chromobacterium sphagni
Comparison to close relatives: Neisseria bacilliformis
Comparison to close relatives: Methylovorus menthalis
Comparison to close relatives: Kingella oralis
Comparison to close relatives: Zoogloea ramigera
Comparison to close relatives: Neisseria wadsworthii
Comparison to close relatives: Methylovorus glucosotrophus
Comparison to close relatives: Aquitalea palustris
Comparison to close relatives: Chromobacterium alticapitis
Comparison to close relatives: Sulfuriferula thiophila
Comparison to close relatives: Chromobacterium vaccinii
Comparison to close relatives: Sulfuriferula nivalis
Comparison to close relatives: Methyloradius palustris
Comparison to close relatives: Neisseria elongata subsp. glycolytica
Comparison to close relatives: Sulfurimicrobium lacus
Comparison to close relatives: Methylotenera mobilis
Comparison to close relatives: Cognatazoarcus halotolerans
Comparison to close relatives: Deefgea rivuli
Comparison to close relatives: Methylotenera versatilis
Comparison to close relatives: Methylophilus luteus
Comparison to close relatives: Nitrosopumilus maritimus
Comparison to close relatives: Neisseria elongata
CAZyme: GH135
CAZyme: GH28
CAZyme: GH101
CAZyme: GH13
CAZyme: GH76
CAZyme: GH19
CAZyme: GH0
CAZyme: GH103
CAZyme: GT66
CAZyme: GT2
CAZyme: GT22
CAZyme: GT9
CAZyme: GT4
CAZyme: GT1
CAZyme: GT0
CAZyme: GT20
CAZyme: CBM50
CAZyme: CBM13
CAZyme: CBM2
CAZyme: CBM5
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine

GCF_000242875.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCF_000242875.2 (Pathway)
Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
Metabolic module: M00031

GCF_000242875.2 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCF_000242875.2 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCF_000242875.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCF_000242875.2 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCF_000242875.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCF_000242875.2 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCF_000242875.2 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, archaea
Metabolic module: M00365

GCF_000242875.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCF_000242875.2 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCF_000242875.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCF_000242875.2 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCF_000242875.2 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCF_000242875.2 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCF_000242875.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCF_000242875.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000242875.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000242875.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 3.2
Relative abundance (%): 0.14

GCF_000242875.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 22.8
Relative abundance (%): 0.64

GCF_000242875.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCF_000242875.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.02

GCF_000242875.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 32.1
Relative abundance (%): 7.1

GCF_000242875.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 3.5
Relative abundance (%): 0.1

GCF_000242875.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 4.5
Relative abundance (%): 1.82

GCF_000242875.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCF_000242875.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 1.7
Relative abundance (%): 0.23

GCF_000242875.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 1.7
Relative abundance (%): 0.03

GCF_000242875.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.19

GCF_000242875.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 61.4
Relative abundance (%): 2.19

GCF_000242875.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.66

GCF_000242875.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCF_000242875.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000242875.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.11

GCF_000242875.2 (MAGs)
MAGs: no MAG matches found