GCF_000214415.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Methanocaldococcus bathoardescens
Comparison to close relatives: Methanocaldococcus fervens
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Methanocaldococcus lauensis
Comparison to close relatives: Methanofervidicoccus abyssi
Comparison to close relatives: Methanocaldococcus infernus
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Methanocaldococcus villosus
Comparison to close relatives: Methanocaldococcus vulcanius
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanocaldococcus indicus
Comparison to close relatives: Methanococcus aeolicus
Comparison to close relatives: Methanococcus vannielii
Comparison to close relatives: Thermococcus gammatolerans
Comparison to close relatives: Thermococcus cleftensis
Comparison to close relatives: Thermococcus kodakarensis
Comparison to close relatives: Thermococcus henrietii
Comparison to close relatives: Thermococcus coalescens
Comparison to close relatives: Thermococcus piezophilus
Comparison to close relatives: Pyrococcus kukulkanii
Comparison to close relatives: Thermococcus thermotolerans
Comparison to close relatives: Thermococcus peptonophilus
Comparison to close relatives: Thermococcus camini
Comparison to close relatives: Pyrococcus furiosus
Comparison to close relatives: Thermococcus eurythermalis
Comparison to close relatives: Methanothermus sociabilis
Comparison to close relatives: Thermococcus paralvinellae
Comparison to close relatives: Thermococcus nautili
Comparison to close relatives: Thermococcus celericrescens
Comparison to close relatives: Thermococcus fumicolans
Comparison to close relatives: Methanococcus maripaludis
Comparison to close relatives: Thermococcus thioreducens
Comparison to close relatives: Thermococcus pacificus
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Thermococcus barossii
Comparison to close relatives: Thermococcus profundus
Comparison to close relatives: Methanothermus fervidus
Comparison to close relatives: Thermococcus hydrothermalis
Comparison to close relatives: Methanococcus voltae
Comparison to close relatives: Thermococcus gorgonarius
Comparison to close relatives: Thermococcus siculi
Comparison to close relatives: Thermococcus sibiricus
Comparison to close relatives: Thermococcus celer
Comparison to close relatives: Thermococcus stetteri
Comparison to close relatives: Thermococcus guaymasensis
Comparison to close relatives: Thermococcus aegaeus
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Thermococcus waiotapuensis
Carbon source: starch
CAZyme: GH15
CAZyme: GH13
CAZyme: GH57
CAZyme: GH5
CAZyme: GH0
CAZyme: GT13
CAZyme: GT66
CAZyme: GT5
CAZyme: GT2
CAZyme: GT35
CAZyme: GT4
CAZyme: GT1
CAZyme: GT9
CAZyme: GT0
CAZyme: GT20
CAZyme: PL12
CAZyme: CE9
CAZyme: CBM50
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

GCF_000214415.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCF_000214415.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCF_000214415.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCF_000214415.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCF_000214415.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCF_000214415.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCF_000214415.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCF_000214415.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCF_000214415.1 (Pathway)
Pathway: Coenzyme M biosynthesis
Metabolic module: M00358

GCF_000214415.1 (Pathway)
Pathway: F420 biosynthesis, archaea
Metabolic module: M00378

GCF_000214415.1 (Pathway)
Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA
Metabolic module: M00422

GCF_000214415.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCF_000214415.1 (Pathway)
Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Metabolic module: M00535

GCF_000214415.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCF_000214415.1 (Pathway)
Pathway: Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin
Metabolic module: M00577

GCF_000214415.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCF_000214415.1 (Pathway)
Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Metabolic module: M00608

GCF_000214415.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCF_000214415.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCF_000214415.1 (Pathway)
Pathway: Methanofuran biosynthesis
Metabolic module: M00935

GCF_000214415.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCF_000214415.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCF_000214415.1 (Pathway)
Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Metabolic module: M01014

GCF_000214415.1 (Pathway)
Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Metabolic module: M00968

GCF_000214415.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCF_000214415.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCF_000214415.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCF_000214415.1 (Pathway)
Pathway: Methanogenesis, CO2 => methane
Metabolic module: M00567

GCF_000214415.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCF_000214415.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCF_000214415.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCF_000214415.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCF_000214415.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCF_000214415.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCF_000214415.1 (Pathway)
Pathway: Methanogenesis from carbon dioxide
Metabolic module: MF0100

GCF_000214415.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCF_000214415.1 (MAGs)
MAGs: no MAG matches found