GCA_016874675.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Thermococcus piezophilus
Comparison to close relatives: Archaeoglobus neptunius
Comparison to close relatives: Thermococcus camini
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Thermococcus celericrescens
Comparison to close relatives: Thermococcus eurythermalis
Comparison to close relatives: Methanocaldococcus bathoardescens
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Thermococcus thermotolerans
Comparison to close relatives: Thermococcus kodakarensis
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanolinea mesophila
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Thermococcus coalescens
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Archaeoglobus fulgidus
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Methanocaldococcus infernus
Comparison to close relatives: Thermococcus gammatolerans
Comparison to close relatives: Thermococcus atlanticus
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Thermococcus cleftensis
Comparison to close relatives: Thermococcus thioreducens
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanocaldococcus fervens
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Thermococcus henrietii
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Thermogymnomonas acidicola
Carbon source: starch
CAZyme: GH0
CAZyme: GH13
CAZyme: GH57
CAZyme: GH101
CAZyme: GH109
CAZyme: GT66
CAZyme: GT7
CAZyme: GT35
CAZyme: GT22
CAZyme: GT4
CAZyme: GT5
CAZyme: GT2
CAZyme: GT1
CAZyme: GT51
CAZyme: CBM12
CAZyme: CBM5
CAZyme: CBM50
CAZyme: CBM48
Pathway: Glycolysis, core module involving three-carbon compounds
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD

GCA_016874675.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_016874675.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_016874675.1 (Pathway)
Pathway: Formaldehyde assimilation, ribulose monophosphate pathway
Metabolic module: M00345

GCA_016874675.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_016874675.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_016874675.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_016874675.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_016874675.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_016874675.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_016874675.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_016874675.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_016874675.1 (Pathway)
Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Metabolic module: M00051

GCA_016874675.1 (Pathway)
Pathway: C1-unit interconversion, prokaryotes
Metabolic module: M00140

GCA_016874675.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_016874675.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_016874675.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_016874675.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_016874675.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_016874675.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_016874675.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_016874675.1 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_016874675.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_016874675.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 2.1
Relative abundance (%): 0.02

GCA_016874675.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.02

GCA_016874675.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_016874675.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016874675.1 (MAGs)
MAGs: GCA_016874675.1_JGI_2017-08-21_genomic.fna
Ecosystem: Lake_(Lake_Tanganika

GCA_016874675.1 (MAGs)
MAGs: 3300020109_46.fna
Ecosystem: Generic