GCA_016871995.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Nitrososphaera viennensis
Comparison to close relatives: Conexivisphaera calida
Comparison to close relatives: Nitrosopumilus maritimus
Comparison to close relatives: Nitrosopumilus adriaticus
Comparison to close relatives: Nitrosopumilus ureiphilus
Comparison to close relatives: Nitrosopumilus zosterae
Comparison to close relatives: Nitrosopumilus piranensis
Comparison to close relatives: Nitrosopumilus cobalaminigenes
Comparison to close relatives: Aeropyrum camini
Comparison to close relatives: Nitrosarchaeum koreense
Comparison to close relatives: Nitrosopumilus oxyclinae
Comparison to close relatives: Aeropyrum pernix
Comparison to close relatives: Thermofilum pendens
Comparison to close relatives: Thermofilum adornatum
Comparison to close relatives: Thermofilum uzonense
Comparison to close relatives: Ignisphaera aggregans
Comparison to close relatives: Ignicoccus hospitalis
Comparison to close relatives: Staphylothermus hellenicus
Comparison to close relatives: Thermogladius calderae
Comparison to close relatives: Pyrodictium occultum
Comparison to close relatives: Thermosphaera aggregans
Comparison to close relatives: Ignicoccus pacificus
Comparison to close relatives: Sulfolobus acidocaldarius
Comparison to close relatives: Pyrofollis japonicus
Comparison to close relatives: Desulfurococcus mucosus
Comparison to close relatives: Pyrodictium delaneyi
Comparison to close relatives: Saccharolobus caldissimus
Comparison to close relatives: Vulcanisaeta distributa
Comparison to close relatives: Pyrolobus fumarii
Comparison to close relatives: Saccharolobus shibatae
Comparison to close relatives: Saccharolobus solfataricus
Comparison to close relatives: Caldisphaera lagunensis
Comparison to close relatives: Desulfurococcus amylolyticus
Comparison to close relatives: Acidilobus saccharovorans
Comparison to close relatives: Sulfurisphaera tokodaii
Comparison to close relatives: Pyrobaculum calidifontis
Comparison to close relatives: Vulcanisaeta souniana
Comparison to close relatives: Caldivirga maquilingensis
Comparison to close relatives: Pyrobaculum igneiluti
Comparison to close relatives: Fervidicoccus fontis
Comparison to close relatives: Thermococcus sibiricus
Comparison to close relatives: Vulcanisaeta thermophila
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Thermodiscus maritimus
Comparison to close relatives: Sulfophobococcus zilligii
Comparison to close relatives: Thermococcus waiotapuensis
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Stygiolobus caldivivus
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Ignicoccus islandicus
CAZyme: GH105
CAZyme: GH0
CAZyme: GH19
CAZyme: GH27
CAZyme: GT7
CAZyme: GT66
CAZyme: GT13
CAZyme: GT4
CAZyme: GT2
CAZyme: GT22
CAZyme: GT1
CAZyme: GT20
CAZyme: GT51
CAZyme: PL12
CAZyme: CE14
CAZyme: CBM50
CAZyme: CBM2
CAZyme: CBM5
CAZyme: CBM66
Pathway: Glycolysis, core module involving three-carbon compounds
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

GCA_016871995.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_016871995.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_016871995.1 (Pathway)
Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
Metabolic module: M00031

GCA_016871995.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_016871995.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_016871995.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_016871995.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_016871995.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_016871995.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_016871995.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_016871995.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_016871995.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_016871995.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_016871995.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_016871995.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_016871995.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_016871995.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_016871995.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_016871995.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_016871995.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_016871995.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_016871995.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.01

GCA_016871995.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.09

GCA_016871995.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 1.7
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016871995.1 (MAGs)
MAGs: GCA_016871995.1_JGI_2017-08-21_genomic.fna
Ecosystem: Lake_(Lake_Tanganika