GCA_025361645.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanosarcina spelaei
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanosarcina flavescens
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanosarcina barkeri
Comparison to close relatives: Methanosarcina lacustris
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanosarcina thermophila
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanosarcina acetivorans
Comparison to close relatives: Methanosarcina mazei
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanolobus chelungpuianus
Comparison to close relatives: Methanolobus psychrotolerans
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanosarcina soligelidi
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Methanolobus taylorii
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanolobus vulcani
Comparison to close relatives: Methanolobus oregonensis
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanohalophilus portucalensis
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanolobus tindarius
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanococcoides alaskense
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanosarcina baltica
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanoculleus thermophilus
Carbon source: starch
CAZyme: GH94
CAZyme: GH43
CAZyme: GH133
CAZyme: GH154
CAZyme: GH57
CAZyme: GH13
CAZyme: GH105
CAZyme: GH0
CAZyme: GH19
CAZyme: GH24
CAZyme: GT84
CAZyme: GT2
CAZyme: GT13
CAZyme: GT66
CAZyme: GT35
CAZyme: GT3
CAZyme: GT1
CAZyme: GT4
CAZyme: GT0
CAZyme: GT20
CAZyme: CE6
CAZyme: CE9
CAZyme: CE14
CAZyme: CE4
CAZyme: CBM50

GCA_025361645.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_025361645.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_025361645.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_025361645.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_025361645.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_025361645.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_025361645.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_025361645.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_025361645.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_025361645.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_025361645.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_025361645.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_025361645.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_025361645.1 (Pathway)
Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA
Metabolic module: M00422

GCA_025361645.1 (Pathway)
Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Metabolic module: M00527

GCA_025361645.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_025361645.1 (Pathway)
Pathway: Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430
Metabolic module: M00836

GCA_025361645.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_025361645.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_025361645.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_025361645.1 (Pathway)
Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Metabolic module: M00968

GCA_025361645.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_025361645.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_025361645.1 (Pathway)
Pathway: Methanogenesis, CO2 => methane
Metabolic module: M00567

GCA_025361645.1 (Pathway)
Pathway: Methanogenesis, acetate => methane
Metabolic module: M00357

GCA_025361645.1 (Pathway)
Pathway: Fructose degradation
Metabolic module: MF0015

GCA_025361645.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_025361645.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_025361645.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_025361645.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_025361645.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_025361645.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_025361645.1 (Pathway)
Pathway: Methanogenesis from carbon dioxide
Metabolic module: MF0100

GCA_025361645.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.01

GCA_025361645.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_025361645.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_025361645.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 14
Relative abundance (%): 0.35

GCA_025361645.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.04

GCA_025361645.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 1.7
Relative abundance (%): 4.45

GCA_025361645.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.14

GCA_025361645.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.93

GCA_025361645.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 2.1
Relative abundance (%): 1.28

GCA_025361645.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 3.8
Relative abundance (%): 0.15

GCA_025361645.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.02

GCA_025361645.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 24.9
Relative abundance (%): 1.87

GCA_025361645.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 16.2
Relative abundance (%): 0.82

GCA_025361645.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 2.7
Relative abundance (%): 0.65

GCA_025361645.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 3
Relative abundance (%): 1.21

GCA_025361645.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_025361645.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.01

GCA_025361645.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_025361645.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_025361645.1 (MAGs)
MAGs: no MAG matches found