GCA_041657955.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanococcoides alaskense
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanosarcina soligelidi
Comparison to close relatives: Methanosarcina mazei
Comparison to close relatives: Methanosarcina lacustris
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Archaeoglobus neptunius
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Archaeoglobus sulfaticallidus
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanosarcina flavescens
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Archaeoglobus fulgidus
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Geoglobus acetivorans
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Archaeoglobus infectus
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Geoglobus ahangari
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Methanothermococcus okinawensis
Carbon source: starch
CAZyme: GH33
CAZyme: GH57
CAZyme: GH0
CAZyme: GH19
CAZyme: GH105
CAZyme: GH38
CAZyme: GH109
CAZyme: GH43
CAZyme: GT66
CAZyme: GT7
CAZyme: GT22
CAZyme: GT5
CAZyme: GT2
CAZyme: GT4
CAZyme: GT0
CAZyme: GT20
CAZyme: CE4
CAZyme: CBM5
CAZyme: CBM50
CAZyme: CBM12
CAZyme: CBM48
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)

GCA_041657955.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_041657955.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_041657955.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_041657955.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_041657955.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_041657955.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_041657955.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_041657955.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_041657955.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_041657955.1 (Pathway)
Pathway: Formaldehyde assimilation, ribulose monophosphate pathway
Metabolic module: M00345

GCA_041657955.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_041657955.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_041657955.1 (Pathway)
Pathway: Coenzyme A biosynthesis, archaea, 2-oxoisovalerate => 4-phosphopantoate => CoA
Metabolic module: M00914

GCA_041657955.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_041657955.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_041657955.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_041657955.1 (Pathway)
Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Metabolic module: M01014

GCA_041657955.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_041657955.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_041657955.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_041657955.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_041657955.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_041657955.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_041657955.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_041657955.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_041657955.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_041657955.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_041657955.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_041657955.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_041657955.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_041657955.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_041657955.1 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_041657955.1 (Pathway)
Pathway: Hydrogen metabolism
Metabolic module: MF0098

GCA_041657955.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.01

GCA_041657955.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.02

GCA_041657955.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_041657955.1 (MAGs)
MAGs: 3300028028_25.fna
Ecosystem: Generic