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GCA_028279585.1 (Q184823)

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Revision as of 08:32, 19 August 2026 by Admin (talk | contribs) (‎Created claim: Ecosystem (P27): chicken gut metagenome (Q43001))
genome assembly
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    English
    GCA_028279585.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanococcoides orientis
      16S Identity %
      26.58486707566462
      POCPu
      5.363550519357885
      G+C Difference (%)
      9.509999999999998
      0 references
      Picrophilus oshimae
      16S Identity %
      26.534788540245568
      POCPu
      3.051747014595312
      G+C Difference (%)
      16.21
      0 references
      Methanolobus zinderi
      16S Identity %
      26.41638225255973
      POCPu
      5.433422698838249
      G+C Difference (%)
      8.129999999999995
      0 references
      Methanococcoides methylutens
      16S Identity %
      26.319396847155584
      POCPu
      5.338276181649675
      G+C Difference (%)
      9.689999999999998
      0 references
      Picrophilus torridus
      16S Identity %
      26.16758241758242
      0 references
      Methanomethylovorans thermophila
      16S Identity %
      25.99410898379971
      0 references
      Thermoplasma acidophilum
      16S Identity %
      25.92087312414734
      POCPu
      3.5730137594318685
      G+C Difference (%)
      6.199999999999996
      0 references
      Methanolobus mangrovi
      16S Identity %
      25.698704839809132
      POCPu
      5.56678302406761
      G+C Difference (%)
      10.579999999999998
      0 references
      Methanohalobium evestigatum
      16S Identity %
      25.618131868131865
      POCPu
      4.588014981273409
      G+C Difference (%)
      15.769999999999996
      0 references
      Methanolobus taylorii
      16S Identity %
      25.495750708215297
      0 references
      Methanolobus oregonensis
      16S Identity %
      25.477707006369428
      0 references
      Methanolobus sediminis
      16S Identity %
      25.357873210633947
      POCPu
      5.493333333333333
      G+C Difference (%)
      11.25
      0 references
      Methanohalophilus halophilus
      16S Identity %
      25.34246575342466
      POCPu
      5.2070767993566545
      G+C Difference (%)
      9.79
      0 references
      Methanohalophilus levihalophilus
      16S Identity %
      25.25697503671072
      POCPu
      5.563093622795115
      G+C Difference (%)
      9.669999999999995
      0 references
      Methanosarcina soligelidi
      16S Identity %
      25.225225225225223
      0 references
      Methanohalophilus mahii
      16S Identity %
      25.153374233128833
      POCPu
      5.07378209015565
      G+C Difference (%)
      9.57
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      25.102319236016374
      POCPu
      2.9820261437908497
      G+C Difference (%)
      14.89
      0 references
      Methanomethylovorans uponensis
      16S Identity %
      25.03617945007236
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      24.965893587994543
      POCPu
      5.225453013063633
      G+C Difference (%)
      1.3599999999999994
      0 references
      Methanothrix soehngenii
      16S Identity %
      24.89768076398363
      POCPu
      4.56216577540107
      G+C Difference (%)
      1.1999999999999957
      0 references
      Methanosarcina horonobensis
      16S Identity %
      24.859550561797754
      POCPu
      4.081077404434771
      G+C Difference (%)
      10.879999999999995
      0 references
      Thermoplasma volcanium
      16S Identity %
      24.74437627811861
      POCPu
      3.541757761259292
      G+C Difference (%)
      12.269999999999996
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      24.687933425797503
      POCPu
      5.113942221424726
      G+C Difference (%)
      10.32
      0 references
      Methanolobus halotolerans
      16S Identity %
      24.53505007153076
      POCPu
      4.933551793191334
      G+C Difference (%)
      8.61
      0 references
      Methanolobus chelungpuianus
      16S Identity %
      24.444444444444443
      POCPu
      5.310382713788683
      G+C Difference (%)
      4.039999999999999
      0 references
      Methanosarcina semesiae
      16S Identity %
      24.410540915395284
      0 references
      Methanolobus psychrotolerans
      16S Identity %
      24.248927038626608
      POCPu
      5.055799797091647
      G+C Difference (%)
      10.86
      0 references
      Methanosalsum zhilinae
      16S Identity %
      24.064925899788285
      POCPu
      5.258915978238968
      G+C Difference (%)
      13.030000000000001
      0 references
      Methanolobus profundi
      16S Identity %
      23.97995705082319
      POCPu
      4.858022579541567
      G+C Difference (%)
      9.619999999999997
      0 references
      Methanomethylophilus alvi
      16S Identity %
      23.959151610369204
      POCPu
      6.692913385826772
      G+C Difference (%)
      3.4000000000000057
      0 references
      Methermicoccus shengliensis
      16S Identity %
      23.898431665421956
      POCPu
      5.059392872855257
      G+C Difference (%)
      2.3800000000000026
      0 references
      Methanolobus vulcani
      16S Identity %
      23.849964614295825
      POCPu
      5.172716114325794
      G+C Difference (%)
      11.989999999999995
      0 references
      Methanosarcina vacuolata
      16S Identity %
      23.78673957621326
      POCPu
      4.586330935251799
      G+C Difference (%)
      12.479999999999997
      0 references
      Methanolobus bombayensis
      16S Identity %
      23.78673957621326
      POCPu
      5.326667815893812
      G+C Difference (%)
      12.469999999999999
      0 references
      Methanosarcina acetivorans
      16S Identity %
      23.60817477096547
      POCPu
      3.91304347826087
      G+C Difference (%)
      9.509999999999998
      0 references
      Methanomassiliicoccus luminyensis
      16S Identity %
      23.340321453529
      POCPu
      7.879992770648834
      G+C Difference (%)
      8.29
      0 references
      Methanosarcina siciliae
      16S Identity %
      23.32421340629275
      POCPu
      4.213757499651178
      G+C Difference (%)
      9.25
      0 references
      Methanococcoides burtonii
      16S Identity %
      23.124147339699864
      POCPu
      4.88200324265898
      G+C Difference (%)
      11.43
      0 references
      Methanosarcina barkeri
      16S Identity %
      22.983583154889363
      POCPu
      4.210992907801418
      G+C Difference (%)
      13
      0 references
      Methanosarcina flavescens
      16S Identity %
      22.944960686204432
      POCPu
      4.669328241624718
      G+C Difference (%)
      10.879999999999995
      0 references
      Methanosarcina subterranea
      16S Identity %
      22.926829268292686
      0 references
      Methanosarcina lacustris
      16S Identity %
      22.780203784570595
      POCPu
      4.3871975019516
      G+C Difference (%)
      10.369999999999997
      0 references
      Methanoregula boonei
      16S Identity %
      22.59182259182259
      POCPu
      3.806734992679356
      G+C Difference (%)
      2.3200000000000003
      0 references
      Methanolinea tarda
      16S Identity %
      22.587412587412587
      POCPu
      3.2147449635662237
      G+C Difference (%)
      2.6400000000000006
      0 references
      Methanosphaerula palustris
      16S Identity %
      22.206991089787525
      POCPu
      3.622047244094488
      G+C Difference (%)
      3.1600000000000037
      0 references
      Methanoculleus marisnigri
      16S Identity %
      22.093023255813954
      POCPu
      3.8951449141591286
      G+C Difference (%)
      9.870000000000005
      0 references
      Thermogymnomonas acidicola
      16S Identity %
      21.88183807439825
      POCPu
      4.150453955901426
      G+C Difference (%)
      4.240000000000002
      0 references
      Methanoculleus palmolei
      16S Identity %
      21.77871148459384
      0 references
      Methanoculleus hydrogenitrophicus
      16S Identity %
      21.663172606568835
      0 references
      Methanoculleus thermophilus
      16S Identity %
      21.616022099447513
      POCPu
      4.238921001926782
      G+C Difference (%)
      7.130000000000003
      0 references
      CAZyme
      GH97
      Occurance
      1
      0 references
      GH13
      Occurance
      2
      0 references
      GH101
      Occurance
      2
      0 references
      GH105
      Occurance
      1
      0 references
      GH0
      Occurance
      6
      0 references
      GH109
      Occurance
      1
      0 references
      GH19
      Occurance
      4
      0 references
      GH43
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT2
      Occurance
      17
      0 references
      GT7
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT5
      Occurance
      2
      0 references
      GT4
      Occurance
      20
      0 references
      GT0
      Occurance
      2
      0 references
      CBM5
      Occurance
      6
      0 references
      CBM50
      Occurance
      3
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM48
      Occurance
      2
      0 references
      Pathway
       
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