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‎Added qualifier: Relative abundance (%) (P19): 0
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank

Revision as of 01:25, 16 July 2026

genome assembly
Language Label Description Also known as
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    English
    GCA_000198515.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methyloterricola oryzae
      16S Identity %
      88.62745098039215
      POCPu
      16.794364804745427
      G+C Difference (%)
      7.840000000000003
      0 references
      Pseudomonas extremorientalis
      16S Identity %
      88.55820105820106
      POCPu
      19.735599622285175
      G+C Difference (%)
      7.670000000000002
      0 references
      Hahella chejuensis
      16S Identity %
      88.42380640941792
      POCPu
      18.526480359585694
      G+C Difference (%)
      0.6099999999999994
      0 references
      Pseudomonas typographi
      16S Identity %
      88.36601307189542
      POCPu
      18.07344332091538
      G+C Difference (%)
      8.89
      0 references
      Pseudomonas paralactis
      16S Identity %
      88.35840418574232
      POCPu
      20.252613240418118
      G+C Difference (%)
      6.469999999999999
      0 references
      Pseudomonas poae
      16S Identity %
      88.33551769331585
      POCPu
      19.90699734278122
      G+C Difference (%)
      7.219999999999999
      0 references
      Pseudomonas salmasensis
      16S Identity %
      88.29300196206671
      POCPu
      19.99347684279191
      G+C Difference (%)
      7.030000000000001
      0 references
      Pseudomonas lactis
      16S Identity %
      88.29300196206671
      POCPu
      18.926553672316384
      G+C Difference (%)
      6.760000000000005
      0 references
      Pseudomonas cremoris
      16S Identity %
      88.29300196206671
      0 references
      Pseudomonas haemolytica
      16S Identity %
      88.28534031413614
      POCPu
      20.215897939156037
      G+C Difference (%)
      6.770000000000003
      0 references
      Pseudomonas trivialis
      16S Identity %
      88.2699868938401
      POCPu
      20.448593874530342
      G+C Difference (%)
      7.719999999999999
      0 references
      Pseudomonas cavernae
      16S Identity %
      88.23529411764706
      POCPu
      24.177292046144505
      G+C Difference (%)
      11.259999999999998
      0 references
      Pseudomonas pergaminensis
      16S Identity %
      88.2275997383911
      POCPu
      19.30470347648262
      G+C Difference (%)
      7.490000000000002
      0 references
      Pseudomonas tritici
      16S Identity %
      88.2275997383911
      POCPu
      19.81953625013115
      G+C Difference (%)
      6.609999999999999
      0 references
      Pseudomonas cavernicola
      16S Identity %
      88.2275997383911
      POCPu
      23.0837394771821
      G+C Difference (%)
      7.380000000000003
      0 references
      Pseudomonas rhodesiae
      16S Identity %
      88.21593153390388
      POCPu
      20.46472856100865
      G+C Difference (%)
      6.980000000000004
      0 references
      Pseudomonas lurida
      16S Identity %
      88.20445609436435
      POCPu
      19.701272746397393
      G+C Difference (%)
      7.350000000000001
      0 references
      Pseudomonas boanensis
      16S Identity %
      88.16993464052287
      POCPu
      22.70360110803324
      G+C Difference (%)
      9.07
      0 references
      Pseudomonas shahriarae
      16S Identity %
      88.1621975147155
      POCPu
      20.891636836967134
      G+C Difference (%)
      7.330000000000005
      0 references
      Pseudomonas tehranensis
      16S Identity %
      88.1621975147155
      POCPu
      20.880434782608695
      G+C Difference (%)
      7.200000000000003
      0 references
      Aquisalimonas halophila
      16S Identity %
      88.1544502617801
      0 references
      Pseudomonas farris
      16S Identity %
      88.10457516339869
      POCPu
      20.32587398164381
      G+C Difference (%)
      5.480000000000004
      0 references
      Pseudomonas alvandae
      16S Identity %
      88.0967952910399
      POCPu
      20.655285759728557
      G+C Difference (%)
      7.600000000000001
      0 references
      Pseudomonas zarinae
      16S Identity %
      88.0967952910399
      0 references
      Pseudomonas ogarae
      16S Identity %
      88.0967952910399
      0 references
      Pseudomonas fluorescens
      16S Identity %
      88.04990151017729
      POCPu
      19.344565440723237
      G+C Difference (%)
      6.730000000000004
      0 references
      Pseudomonas cucumis
      16S Identity %
      88.0392156862745
      POCPu
      20.849216433714528
      G+C Difference (%)
      5.730000000000004
      0 references
      Pseudomonas idahonensis
      16S Identity %
      88.0392156862745
      POCPu
      19.503652556789753
      G+C Difference (%)
      8.86
      0 references
      Pseudomonas danubii
      16S Identity %
      88.0392156862745
      0 references
      Pseudomonas asgharzadehiana
      16S Identity %
      88.03139306736429
      POCPu
      20.589180503481522
      G+C Difference (%)
      7.330000000000005
      0 references
      Pseudomonas khavaziana
      16S Identity %
      88.03139306736429
      POCPu
      19.846775028470855
      G+C Difference (%)
      6.350000000000001
      0 references
      Pseudomonas zanjanensis
      16S Identity %
      88.03139306736429
      POCPu
      20.188658787813075
      G+C Difference (%)
      7.950000000000003
      0 references
      Pseudomonas azerbaijanoccidentalis
      16S Identity %
      88.03139306736429
      POCPu
      19.927826784282278
      G+C Difference (%)
      6.039999999999999
      0 references
      Pseudomonas tremae
      16S Identity %
      88.01571709233792
      POCPu
      19.388516032811335
      G+C Difference (%)
      4.530000000000001
      0 references
      Pseudomonas congelans
      16S Identity %
      88.01571709233792
      POCPu
      20.307553143374037
      G+C Difference (%)
      6.010000000000005
      0 references
      Pseudomonas cedrina subsp. fulgida
      16S Identity %
      88.00786369593709
      0 references
      Pseudomonas silesiensis
      16S Identity %
      87.97385620915033
      POCPu
      20.05030181086519
      G+C Difference (%)
      6.32
      0 references
      Pseudomonas prosekii
      16S Identity %
      87.96599084368869
      POCPu
      20.60475161987041
      G+C Difference (%)
      6.300000000000004
      0 references
      Pseudomonas kielensis
      16S Identity %
      87.96599084368869
      POCPu
      20.53036783575706
      G+C Difference (%)
      7.580000000000005
      0 references
      Pseudomonas cannabina
      16S Identity %
      87.95022920759659
      POCPu
      18.288334182373916
      G+C Difference (%)
      5.200000000000003
      0 references
      Pseudomonas synxantha
      16S Identity %
      87.79527559055119
      POCPu
      19.31206380857428
      G+C Difference (%)
      6.359999999999999
      0 references
      Pseudomonas iranensis
      16S Identity %
      87.7124183006536
      POCPu
      20.545729076790337
      G+C Difference (%)
      6.630000000000003
      0 references
      Pseudomonas lini
      16S Identity %
      87.6882776686313
      POCPu
      20.231932077034585
      G+C Difference (%)
      5.560000000000002
      0 references
      Pseudomonas paraeruginosa
      16S Identity %
      87.64783180026281
      POCPu
      21.516372275591365
      G+C Difference (%)
      13.380000000000003
      0 references
      Pseudomonas tructae
      16S Identity %
      87.6470588235294
      POCPu
      21.198208286674134
      G+C Difference (%)
      8.57
      0 references
      Pseudomonas rubra
      16S Identity %
      87.6470588235294
      POCPu
      20.599088343824615
      G+C Difference (%)
      8.080000000000005
      0 references
      Pseudomonas protegens
      16S Identity %
      87.60655737704917
      POCPu
      19.43526584559928
      G+C Difference (%)
      10.130000000000003
      0 references
      Pseudomonas aeruginosa
      16S Identity %
      87.5984251968504
      POCPu
      21.631720988166908
      G+C Difference (%)
      13.259999999999998
      0 references
      Pseudomonas chlororaphis
      POCPu
      19.941467352911495
      G+C Difference (%)
      9.719999999999999
      0 references
      Pseudomonas cedrina
      POCPu
      19.731404958677686
      G+C Difference (%)
      7.450000000000003
      0 references
      Carbon source
      cellulose
      0 references
      CAZyme
      GH23
      Occurance
      13
      0 references
      GH4
      Occurance
      4
      0 references
      GH94
      Occurance
      1
      0 references
      GH13
      Occurance
      2
      0 references
      GH0
      Occurance
      6
      0 references
      GH73
      Occurance
      2
      0 references
      GH6
      Occurance
      2
      0 references
      GH5
      Occurance
      2
      0 references
      GH16
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH101
      Occurance
      4
      0 references
      GH39
      Occurance
      2
      0 references
      GH43
      Occurance
      2
      0 references
      GH103
      Occurance
      2
      0 references
      GH135
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH114
      Occurance
      1
      0 references
      GT2
      Occurance
      37
      0 references
      GT0
      Occurance
      5
      0 references
      GT4
      Occurance
      26
      0 references
      GT32
      Occurance
      1
      0 references
      GT13
      Occurance
      2
      0 references
      GT51
      Occurance
      4
      0 references
      GT41
      Occurance
      2
      0 references
      GT90
      Occurance
      1
      0 references
      GT25
      Occurance
      3
      0 references
      GT22
      Occurance
      1
      0 references
      GT1
      Occurance
      5
      0 references
      GT83
      Occurance
      1
      0 references
      GT28
      Occurance
      5
      0 references
      GT30
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT26
      Occurance
      3
      0 references
      CE14
      Occurance
      3
      0 references
      CE6
      Occurance
      2
      0 references
      CE4
      Occurance
      4
      0 references
      CE11
      Occurance
      1
      0 references
      CBM13
      Occurance
      5
      0 references
      CBM41
      Occurance
      8
      0 references
      CBM5
      Occurance
      4
      0 references
      CBM50
      Occurance
      17
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      CBM20
      Occurance
      1
      0 references
      CBM48
      Occurance
      3
      0 references
      Pathway
       
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