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‎Added qualifier: Relative abundance (%) (P19): 0
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank

Revision as of 02:20, 19 August 2026

genome assembly
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    English
    GCF_013760955.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Thermococcus gammatolerans
      16S Identity %
      28.035470668485672
      POCPu
      8.79560219890055
      G+C Difference (%)
      20.42
      0 references
      Thermococcus coalescens
      16S Identity %
      28.016359918200408
      0 references
      Thermococcus kodakarensis
      16S Identity %
      27.94819359236537
      POCPu
      9.369717459550833
      G+C Difference (%)
      18.86
      0 references
      Thermococcus eurythermalis
      16S Identity %
      27.880027266530334
      POCPu
      8.692476260043827
      G+C Difference (%)
      20.310000000000002
      0 references
      Methanocaldococcus vulcanius
      16S Identity %
      27.015558698727016
      POCPu
      50.40401225968236
      G+C Difference (%)
      1.5600000000000023
      0 references
      Thermococcus sibiricus
      16S Identity %
      26.993865030674847
      POCPu
      9.353078721745907
      G+C Difference (%)
      7.060000000000002
      0 references
      Thermococcus cleftensis
      16S Identity %
      26.65303340149966
      POCPu
      8.918503331624809
      G+C Difference (%)
      22.68
      0 references
      Thermococcus piezophilus
      16S Identity %
      26.31220177232447
      POCPu
      9.006590187942397
      G+C Difference (%)
      17.97
      0 references
      Pyrococcus furiosus
      16S Identity %
      25.903203817314246
      POCPu
      9.720101781170483
      G+C Difference (%)
      7.630000000000003
      0 references
      Palaeococcus pacificus
      16S Identity %
      25.887265135699373
      POCPu
      10.529072812991094
      G+C Difference (%)
      9.899999999999999
      0 references
      Thermococcus atlanticus
      16S Identity %
      25.68149210903874
      0 references
      Thermococcus litoralis
      16S Identity %
      25.49420586230402
      POCPu
      9.271676300578035
      G+C Difference (%)
      9.950000000000003
      0 references
      Methanocaldococcus indicus
      16S Identity %
      25.035765379113016
      0 references
      Methanocaldococcus lauensis
      16S Identity %
      24.9811320754717
      POCPu
      53.67430922986478
      G+C Difference (%)
      4.09
      0 references
      Methanocaldococcus villosus
      16S Identity %
      24.931129476584022
      POCPu
      52.27698066126014
      G+C Difference (%)
      3.6400000000000006
      0 references
      Methanocaldococcus infernus
      16S Identity %
      24.897400820793433
      POCPu
      48.39491217443974
      G+C Difference (%)
      0.4799999999999969
      0 references
      Methanobacterium arcticum
      16S Identity %
      24.857954545454543
      0 references
      Thermococcus thioreducens
      16S Identity %
      24.650837988826815
      POCPu
      8.653613729755861
      G+C Difference (%)
      20.310000000000002
      0 references
      Methanococcus vannielii
      16S Identity %
      24.641638225255974
      POCPu
      80.88975937325125
      ANI %
      79.7234
      G+C Difference (%)
      1.8100000000000023
      0 references
      Methanococcus maripaludis
      16S Identity %
      24.628450106157114
      POCPu
      86.34119583104773
      ANI %
      88.3949
      G+C Difference (%)
      0.21999999999999886
      0 references
      Methanotorris igneus
      16S Identity %
      24.608043626448534
      POCPu
      57.80821917808219
      G+C Difference (%)
      0.8400000000000034
      0 references
      Methanobacterium bryantii
      16S Identity %
      24.601910828025478
      POCPu
      15.637140637140638
      G+C Difference (%)
      0.04999999999999716
      0 references
      Thermococcus thermotolerans
      16S Identity %
      24.48700410396717
      POCPu
      8.497686876065254
      G+C Difference (%)
      20.35
      0 references
      Thermococcus celericrescens
      16S Identity %
      24.47171097477846
      POCPu
      8.124144226380649
      G+C Difference (%)
      21.15
      0 references
      Thermococcus camini
      16S Identity %
      24.47171097477846
      POCPu
      8.722819295176205
      G+C Difference (%)
      21.490000000000002
      0 references
      Methanocaldococcus fervens
      16S Identity %
      24.418604651162788
      POCPu
      54.41176470588235
      G+C Difference (%)
      0.9200000000000017
      0 references
      Methanocaldococcus jannaschii
      16S Identity %
      24.283765347885403
      POCPu
      50.0944669365722
      G+C Difference (%)
      1.8500000000000014
      0 references
      Methanococcus voltae
      16S Identity %
      24.147339699863572
      POCPu
      61.12241930793836
      G+C Difference (%)
      4.150000000000002
      0 references
      Thermococcus zilligii
      16S Identity %
      24.140302613480056
      POCPu
      8.935824532900082
      G+C Difference (%)
      21.339999999999996
      0 references
      Methanocaldococcus bathoardescens
      16S Identity %
      24.130879345603272
      POCPu
      54.59474885844748
      G+C Difference (%)
      2.3500000000000014
      0 references
      Thermococcus henrietii
      16S Identity %
      24.130879345603272
      POCPu
      8.673714560307545
      G+C Difference (%)
      21.439999999999998
      0 references
      Methanobacterium movilense
      16S Identity %
      24.050632911392405
      0 references
      Methanobacterium beijingense
      16S Identity %
      24.022743425728503
      0 references
      Methanofervidicoccus abyssi
      16S Identity %
      23.9945466939332
      POCPu
      59.90275526742301
      G+C Difference (%)
      2.1099999999999994
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      23.727647867950484
      POCPu
      66.1923733636881
      G+C Difference (%)
      0.25
      0 references
      Methanobacterium oryzae
      16S Identity %
      23.623693379790943
      0 references
      Methanothermobacter thermautotrophicus
      16S Identity %
      23.61774744027304
      POCPu
      19.735421166306697
      G+C Difference (%)
      16.4
      0 references
      Palaeococcus helgesonii
      16S Identity %
      23.54590049053959
      0 references
      Methanotorris formicicus
      16S Identity %
      23.449216087252896
      POCPu
      56.1246040126716
      G+C Difference (%)
      0.7000000000000028
      0 references
      Thermococcus paralvinellae
      16S Identity %
      23.344709897610922
      POCPu
      9.334006054490414
      G+C Difference (%)
      7.159999999999997
      0 references
      Methanobacterium paludis
      16S Identity %
      23.192360163710777
      POCPu
      16.849731245618134
      G+C Difference (%)
      2.5899999999999963
      0 references
      Methanothermococcus okinawensis
      16S Identity %
      23.04021813224267
      POCPu
      61.35127397652448
      G+C Difference (%)
      3.8599999999999994
      0 references
      Methanothermus sociabilis
      16S Identity %
      22.770919067215363
      0 references
      Methanothermus fervidus
      16S Identity %
      22.714870395634378
      POCPu
      21.455816910362365
      G+C Difference (%)
      1.5
      0 references
      Methanococcus aeolicus
      16S Identity %
      22.5938566552901
      POCPu
      60.602445571130325
      G+C Difference (%)
      3.1000000000000014
      0 references
      Methanobacterium flexile
      16S Identity %
      22.408963585434176
      0 references
      Methanobacterium veterum
      16S Identity %
      22.34678624813154
      POCPu
      15.700861393891936
      G+C Difference (%)
      0.030000000000001137
      0 references
      Methanothermobacter marburgensis
      16S Identity %
      22.305593451568896
      POCPu
      20.3579418344519
      G+C Difference (%)
      15.5
      0 references
      Methanobacterium kanagiense
      16S Identity %
      22.268041237113405
      0 references
      Methanothermobacter crinale
      16S Identity %
      21.896792189679218
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH15
      Occurance
      1
      0 references
      GH13
      Occurance
      2
      0 references
      GH57
      Occurance
      1
      0 references
      GH0
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT5
      Occurance
      1
      0 references
      GT35
      Occurance
      1
      0 references
      GT2
      Occurance
      12
      0 references
      GT4
      Occurance
      8
      0 references
      GT0
      Occurance
      2
      0 references
      GT1
      Occurance
      1
      0 references
      GT11
      Occurance
      1
      0 references
      GT20
      Occurance
      1
      0 references
      CBM50
      Occurance
      5
      0 references
      Pathway
       
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