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Property / Pathway: GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N / qualifier
 

Revision as of 13:31, 21 July 2026

genome assembly
Language Label Description Also known as
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    English
    GCA_001044195.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methylococcus mesophilus
      16S Identity %
      27.153188691650232
      POCPu
      16.543816543816543
      G+C Difference (%)
      24.39
      0 references
      Kineobactrum sediminis
      16S Identity %
      26.627218934911244
      POCPu
      12.547142442703802
      G+C Difference (%)
      20.340000000000003
      0 references
      Methylocaldum szegediense
      16S Identity %
      26.355013550135503
      POCPu
      15.893782383419689
      G+C Difference (%)
      19.090000000000003
      0 references
      Methylococcus geothermalis
      16S Identity %
      25.88699080157687
      POCPu
      17.853780985252587
      G+C Difference (%)
      25.17
      0 references
      Pseudomonas marvdashtae
      16S Identity %
      25.592105263157894
      POCPu
      11.138411138411138
      G+C Difference (%)
      22.560000000000002
      0 references
      Pseudomonas zanjanensis
      16S Identity %
      25.526315789473685
      POCPu
      10.610263522884882
      G+C Difference (%)
      23.130000000000003
      0 references
      Pseudomonas balearica
      16S Identity %
      25.378040762656145
      0 references
      Immundisolibacter cernigliae
      16S Identity %
      25.378040762656145
      POCPu
      14.807206068268014
      G+C Difference (%)
      29.710000000000008
      0 references
      Gilvimarinus polysaccharolyticus
      16S Identity %
      25.369127516778523
      POCPu
      12.639975456358338
      G+C Difference (%)
      11.21
      0 references
      Sedimenticola hydrogenitrophicus
      16S Identity %
      25.36136662286465
      POCPu
      20.53849276146665
      G+C Difference (%)
      22.64
      0 references
      Endothiovibrio diazotrophicus
      16S Identity %
      25.313117996044827
      0 references
      Marichromatium purpuratum
      16S Identity %
      25.19788918205805
      POCPu
      23.30631595045114
      G+C Difference (%)
      29.78
      0 references
      Acidihalobacter aeolianus
      16S Identity %
      25.03285151116951
      POCPu
      16.822008418520745
      G+C Difference (%)
      23.75
      0 references
      Thiorhodococcus minor
      16S Identity %
      24.429065743944637
      POCPu
      20.036828173552767
      G+C Difference (%)
      26.730000000000004
      0 references
      Thiorhodospira sibirica
      16S Identity %
      24.372523117569354
      POCPu
      19.879811596556767
      G+C Difference (%)
      18.550000000000004
      0 references
      Methylococcus capsulatus
      16S Identity %
      24.320652173913043
      POCPu
      18.045112781954884
      G+C Difference (%)
      25.43
      0 references
      Methylicorpusculum oleiharenae
      16S Identity %
      24.275118004045854
      POCPu
      13.699106832154042
      G+C Difference (%)
      8.71
      0 references
      Spongiibacter tropicus
      16S Identity %
      24.15394824153948
      POCPu
      12.589721504450186
      G+C Difference (%)
      19.200000000000003
      0 references
      Allochromatium tepidum
      16S Identity %
      24.096385542168676
      POCPu
      24.856477889837084
      G+C Difference (%)
      26.450000000000003
      0 references
      Thiorhodovibrio frisius
      16S Identity %
      23.832417582417584
      POCPu
      20.141170743580382
      G+C Difference (%)
      22.15
      0 references
      Thiorhodovibrio litoralis
      16S Identity %
      23.668639053254438
      POCPu
      19.78290035370167
      G+C Difference (%)
      23.28
      0 references
      Rhabdochromatium marinum
      16S Identity %
      23.651452282157674
      POCPu
      22.03197962360266
      G+C Difference (%)
      21.590000000000003
      0 references
      Halochromatium roseum
      16S Identity %
      23.63132363132363
      POCPu
      20.888503898032422
      G+C Difference (%)
      23.86
      0 references
      Thiocapsa rosea
      16S Identity %
      23.59009628610729
      POCPu
      20.2482188002758
      G+C Difference (%)
      25.78
      0 references
      Ectothiorhodospira lacustris
      16S Identity %
      23.52168199737188
      POCPu
      18.347029077117572
      G+C Difference (%)
      24.83
      0 references
      Luminiphilus syltensis
      16S Identity %
      23.46594740391099
      POCPu
      12.524023062139655
      G+C Difference (%)
      18.42
      0 references
      Halochromatium glycolicum
      16S Identity %
      23.42778161713891
      POCPu
      21.228488883306117
      G+C Difference (%)
      26.560000000000002
      0 references
      Marinimicrobium locisalis
      16S Identity %
      23.37837837837838
      POCPu
      12.757379409647228
      G+C Difference (%)
      19.71
      0 references
      Chromatocurvus halotolerans
      16S Identity %
      23.2650363516193
      POCPu
      12.11217183770883
      G+C Difference (%)
      24.08
      0 references
      Marichromatium bheemlicum
      16S Identity %
      23.216783216783217
      POCPu
      23.5495945102932
      G+C Difference (%)
      29.120000000000005
      0 references
      Porticoccus litoralis
      16S Identity %
      23.216689098250338
      POCPu
      15.54140127388535
      G+C Difference (%)
      14.980000000000004
      0 references
      Haliea salexigens
      16S Identity %
      23.158593231585932
      POCPu
      12.043998886104148
      G+C Difference (%)
      22.71
      0 references
      Phaeochromatium fluminis
      16S Identity %
      23.15270935960591
      0 references
      Thiorhodococcus alkaliphilus
      16S Identity %
      23.142857142857142
      0 references
      Thiocystis minor
      16S Identity %
      23.108665749656122
      POCPu
      21.370570866141733
      G+C Difference (%)
      24.200000000000003
      0 references
      Thiohalocapsa marina
      16S Identity %
      23.093525179856115
      POCPu
      22.60400397557859
      G+C Difference (%)
      27.86
      0 references
      Imhoffiella bheemlica
      16S Identity %
      23.050379572118704
      0 references
      Thioflavicoccus mobilis
      16S Identity %
      23.029472241261136
      0 references
      Marichromatium gracile
      16S Identity %
      22.966507177033492
      POCPu
      23.200484921957873
      G+C Difference (%)
      30.35000000000001
      0 references
      Thiorhodococcus kakinadensis
      16S Identity %
      22.87719298245614
      0 references
      Parahaliea mediterranea
      16S Identity %
      22.874493927125506
      POCPu
      11.25196027182436
      G+C Difference (%)
      25.190000000000005
      0 references
      Thiorhodococcus fuscus
      16S Identity %
      22.743177046885936
      0 references
      Marichromatium indicum
      16S Identity %
      22.61904761904762
      0 references
      Thiohalocapsa halophila
      16S Identity %
      22.582921665490474
      POCPu
      20.14226437462952
      G+C Difference (%)
      29.710000000000008
      0 references
      Sedimenticola selenatireducens
      16S Identity %
      22.576361221779546
      POCPu
      20.239202657807308
      G+C Difference (%)
      18.53
      0 references
      Phaeobacterium nitratireducens
      16S Identity %
      22.558459422283356
      0 references
      Marimicrobium arenosum
      16S Identity %
      22.524916943521596
      0 references
      Imhoffiella purpurea
      16S Identity %
      22.313483915126625
      POCPu
      21.881749460043196
      G+C Difference (%)
      26.700000000000003
      0 references
      Allochromatium vinosum
      16S Identity %
      22.281167108753316
      POCPu
      24.23500611995104
      G+C Difference (%)
      26.11
      0 references
      Stutzerimonas balearica
      POCPu
      13.89267229637701
      G+C Difference (%)
      26.58
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH13
      Occurance
      5
      0 references
      GH6
      Occurance
      3
      0 references
      GH16
      Occurance
      2
      0 references
      GH23
      Occurance
      4
      0 references
      GH28
      Occurance
      1
      0 references
      GH103
      Occurance
      1
      0 references
      GH77
      Occurance
      1
      0 references
      GH33
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH0
      Occurance
      4
      0 references
      GH19
      Occurance
      1
      0 references
      GH114
      Occurance
      1
      0 references
      GT2
      Occurance
      26
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      20
      0 references
      GT35
      Occurance
      1
      0 references
      GT51
      Occurance
      3
      0 references
      GT0
      Occurance
      5
      0 references
      GT22
      Occurance
      1
      0 references
      GT5
      Occurance
      3
      0 references
      GT83
      Occurance
      1
      0 references
      GT1
      Occurance
      2
      0 references
      GT28
      Occurance
      4
      0 references
      GT9
      Occurance
      3
      0 references
      GT32
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT30
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT20
      Occurance
      1
      0 references
      GT26
      Occurance
      1
      0 references
      PL12
      Occurance
      1
      0 references
      CE11
      Occurance
      2
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      10
      0 references
      CBM20
      Occurance
      2
      0 references
      CBM48
      Occurance
      2
      0 references
      CBM41
      Occurance
      1
      0 references
      CBM13
      Occurance
      4
      0 references
      CBM2
      Occurance
      2
      0 references
      CBM6
      Occurance
      7
      0 references
      CBM5
      Occurance
      1
      0 references
      Pathway
       
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