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‎Added qualifier: Prevalence (%) (P18): 1.7
‎Added qualifier: Relative abundance (%) (P19): 4.45
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 4.45
Amount4.45
Unit1

Revision as of 01:02, 17 August 2026

genome assembly
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    English
    GCA_025361645.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanosarcina spelaei
      16S Identity %
      28.21270310192024
      POCPu
      18.849412814033002
      G+C Difference (%)
      12.829999999999998
      0 references
      Methanococcoides burtonii
      16S Identity %
      28.08683853459973
      POCPu
      19.50183433095192
      G+C Difference (%)
      10.82
      0 references
      Methanosarcina flavescens
      16S Identity %
      27.63997165131113
      POCPu
      22.211913156429762
      G+C Difference (%)
      10.269999999999996
      0 references
      Methanosarcina vacuolata
      16S Identity %
      27.630685675492195
      POCPu
      20.793650793650794
      G+C Difference (%)
      11.869999999999997
      0 references
      Methanosarcina subterranea
      16S Identity %
      27.574291637871458
      0 references
      Methanosalsum zhilinae
      16S Identity %
      27.571728481455565
      POCPu
      21.280766717490742
      G+C Difference (%)
      12.420000000000002
      0 references
      Methanosarcina barkeri
      16S Identity %
      27.459306440198162
      POCPu
      19.496560350218886
      G+C Difference (%)
      12.39
      0 references
      Methanosarcina lacustris
      16S Identity %
      27.45664739884393
      POCPu
      20.6033482512846
      G+C Difference (%)
      9.759999999999998
      0 references
      Methanosarcina siciliae
      16S Identity %
      27.445652173913043
      POCPu
      18.793230316409122
      G+C Difference (%)
      8.64
      0 references
      Methanosarcina thermophila
      16S Identity %
      27.049754730203222
      POCPu
      23.033175355450236
      G+C Difference (%)
      10.43
      0 references
      Methanomethylovorans uponensis
      16S Identity %
      26.580459770114945
      0 references
      Methanohalophilus levihalophilus
      16S Identity %
      26.56023222060958
      POCPu
      20.994359724253187
      G+C Difference (%)
      9.059999999999995
      0 references
      Methanosarcina acetivorans
      16S Identity %
      26.38208537438768
      POCPu
      17.49462943071966
      G+C Difference (%)
      8.899999999999999
      0 references
      Methanosarcina mazei
      16S Identity %
      26.206384558277655
      POCPu
      19.9281280627246
      G+C Difference (%)
      10.159999999999997
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      26.170798898071624
      POCPu
      21.265141318977122
      G+C Difference (%)
      9.71
      0 references
      Methanolobus chelungpuianus
      16S Identity %
      26.044039483675018
      POCPu
      21.890351739045
      G+C Difference (%)
      3.4299999999999997
      0 references
      Methanolobus psychrotolerans
      16S Identity %
      26.02836879432624
      POCPu
      20.263442800433058
      G+C Difference (%)
      10.25
      0 references
      Methanolobus halotolerans
      16S Identity %
      26.02836879432624
      POCPu
      21.577816832649873
      G+C Difference (%)
      8
      0 references
      Methanolobus profundi
      16S Identity %
      25.975869410929736
      POCPu
      19.327731092436977
      G+C Difference (%)
      9.009999999999998
      0 references
      Methanosarcina soligelidi
      16S Identity %
      25.890207715133528
      0 references
      Methanohalophilus halophilus
      16S Identity %
      25.850340136054424
      POCPu
      21.07779226423294
      G+C Difference (%)
      9.18
      0 references
      Methanosarcina semesiae
      16S Identity %
      25.826446280991732
      0 references
      Methanosarcina horonobensis
      16S Identity %
      25.766016713091922
      POCPu
      18.484023499068634
      G+C Difference (%)
      10.269999999999996
      0 references
      Methanolobus taylorii
      16S Identity %
      25.52742616033755
      0 references
      Methanolobus mangrovi
      16S Identity %
      25.49152542372881
      POCPu
      21.139814632222443
      G+C Difference (%)
      9.969999999999999
      0 references
      Methanolobus sediminis
      16S Identity %
      25.423728813559322
      POCPu
      20.255092328193413
      G+C Difference (%)
      10.64
      0 references
      Methanolobus bombayensis
      16S Identity %
      25.390359809911743
      POCPu
      20.003683919690552
      G+C Difference (%)
      11.86
      0 references
      Methanolobus vulcani
      16S Identity %
      25.298664792691493
      POCPu
      19.827424498217972
      G+C Difference (%)
      11.379999999999995
      0 references
      Methanolobus oregonensis
      16S Identity %
      25.298664792691493
      0 references
      Methanolinea tarda
      16S Identity %
      24.982602644398053
      POCPu
      13.926408942710758
      G+C Difference (%)
      3.25
      0 references
      Methanococcoides methylutens
      16S Identity %
      24.778761061946902
      POCPu
      20.704758112681667
      G+C Difference (%)
      9.079999999999998
      0 references
      Methanohalophilus mahii
      16S Identity %
      24.74576271186441
      POCPu
      21.114754098360656
      G+C Difference (%)
      8.96
      0 references
      Methanoculleus marisnigri
      16S Identity %
      24.65940054495913
      POCPu
      16.51139742319128
      G+C Difference (%)
      10.480000000000004
      0 references
      Methanohalophilus portucalensis
      16S Identity %
      24.655312246553123
      POCPu
      20.91629201455791
      G+C Difference (%)
      9.64
      0 references
      Methanosphaerula palustris
      16S Identity %
      24.641638225255974
      POCPu
      14.28036683511136
      G+C Difference (%)
      3.770000000000003
      0 references
      Methanolobus tindarius
      16S Identity %
      24.544179523141654
      POCPu
      19.391083725987677
      G+C Difference (%)
      11.79
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      24.54237288135593
      POCPu
      49.862825788751714
      G+C Difference (%)
      1.9699999999999989
      0 references
      Methanoregula boonei
      16S Identity %
      24.413793103448274
      POCPu
      14.021995286724273
      G+C Difference (%)
      2.9299999999999997
      0 references
      Methanococcoides alaskense
      16S Identity %
      24.399126001456665
      POCPu
      20.173842732969476
      G+C Difference (%)
      9.89
      0 references
      Methanohalobium evestigatum
      16S Identity %
      24.351978171896317
      POCPu
      19.28341384863124
      G+C Difference (%)
      15.159999999999997
      0 references
      Methanomethylovorans thermophila
      16S Identity %
      24.2929659173314
      0 references
      Methanothrix soehngenii
      16S Identity %
      24.271186440677965
      POCPu
      58.49964362081255
      ANI %
      78.8227
      G+C Difference (%)
      0.5899999999999963
      0 references
      Methanosarcina baltica
      16S Identity %
      24.109173616376044
      0 references
      Methermicoccus shengliensis
      16S Identity %
      23.982235381199114
      POCPu
      20.459990416866315
      G+C Difference (%)
      2.990000000000002
      0 references
      Methanolobus zinderi
      16S Identity %
      23.94843962008141
      POCPu
      21.098985257514837
      G+C Difference (%)
      7.519999999999996
      0 references
      Methanothrix harundinacea
      16S Identity %
      23.929098966026586
      POCPu
      47.252306458082636
      G+C Difference (%)
      3.9200000000000017
      0 references
      Methanosalsum natronophilum
      16S Identity %
      23.878536922015183
      POCPu
      19.475077194530215
      G+C Difference (%)
      17.239999999999995
      0 references
      Methanocella arvoryzae
      16S Identity %
      23.641304347826086
      POCPu
      15.648653406090476
      G+C Difference (%)
      3.020000000000003
      0 references
      Methanococcoides orientis
      16S Identity %
      23.11864406779661
      POCPu
      21.165955718058093
      G+C Difference (%)
      8.899999999999999
      0 references
      Methanoculleus thermophilus
      16S Identity %
      23.076923076923077
      POCPu
      17.040265670402658
      G+C Difference (%)
      7.740000000000002
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH94
      Occurance
      1
      0 references
      GH43
      Occurance
      3
      0 references
      GH133
      Occurance
      1
      0 references
      GH154
      Occurance
      1
      0 references
      GH57
      Occurance
      1
      0 references
      GH13
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH19
      Occurance
      1
      0 references
      GH24
      Occurance
      1
      0 references
      GT84
      Occurance
      2
      0 references
      GT2
      Occurance
      11
      0 references
      GT13
      Occurance
      1
      0 references
      GT66
      Occurance
      2
      0 references
      GT35
      Occurance
      3
      0 references
      GT3
      Occurance
      1
      0 references
      GT1
      Occurance
      2
      0 references
      GT4
      Occurance
      12
      0 references
      GT0
      Occurance
      1
      0 references
      GT20
      Occurance
      1
      0 references
      CE6
      Occurance
      1
      0 references
      CE9
      Occurance
      2
      0 references
      CE14
      Occurance
      3
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      12
      0 references
      CBM32
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      CBM6
      Occurance
      1
      0 references
      Pathway
       
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