GCA_000223315.2 (Q44154): Difference between revisions
Appearance
Added qualifier: Occurance (P17): 10 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
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| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 6
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: V/A-type ATPase, prokaryotes / rank | |||||||
Normal rank | |||||||
| Property / Pathway: V/A-type ATPase, prokaryotes / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine cleavage system / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine cleavage system / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation V / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation V / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (pay-off phase) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (pay-off phase) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:formate lyase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:formate lyase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 2.5
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0.08
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0.5
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0.04
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 8.8
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0.84
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 1.5
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0.8
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0.39
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 19.9
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0.18
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0.7
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.5
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0.03
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 1.1
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0.05
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0.4
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0.05
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 63.2
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 1.42
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 2.9
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 9.4
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.02
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0.9
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0.02
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.2
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.07
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 38.4
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 1.1
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 2.6
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0.06
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 16.5
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0.29
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 17.5
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 1.55
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 02:57, 16 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_000223315.2 |
genome assembly |
Statements
no current description - please contribute here
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25.38825118163403
81.72348484848484
91.3109
0.35999999999999943
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25.08638562543193
69.9074074074074
85.7464
0.41999999999999815
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15.398496240601503
17.559999999999995
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