GCA_000182945.1 (Q44045): Difference between revisions
Added qualifier: Ecosystem (P27): Generic (Q43559) |
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| Property / Comparison to close relatives: Pseudostreptobacillus hongkongensis / qualifier | |||||||
16S Identity %: 23.494764397905758
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| Property / Comparison to close relatives: Pseudostreptobacillus hongkongensis / qualifier | |||||||
POCPu: 15.819829717110684
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| Property / Comparison to close relatives: Pseudostreptobacillus hongkongensis / qualifier | |||||||
G+C Difference (%): 1.0199999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Propionigenium modestum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Propionigenium modestum / qualifier | |||||||
16S Identity %: 23.472041612483746
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Anaerosporobacter faecicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Anaerosporobacter faecicola / qualifier | |||||||
16S Identity %: 23.4375
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| Property / Comparison to close relatives: Anaerosporobacter faecicola / qualifier | |||||||
POCPu: 5.930568948891032
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| Property / Comparison to close relatives: Anaerosporobacter faecicola / qualifier | |||||||
G+C Difference (%): 8.910000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Streptobacillus felis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Streptobacillus felis / qualifier | |||||||
16S Identity %: 22.975778546712803
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| Property / Comparison to close relatives: Streptobacillus felis / qualifier | |||||||
POCPu: 15.079579174534663
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| Property / Comparison to close relatives: Streptobacillus felis / qualifier | |||||||
G+C Difference (%): 1.0299999999999976
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium russii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium russii / qualifier | |||||||
16S Identity %: 22.962962962962962
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| Property / Comparison to close relatives: Fusobacterium russii / qualifier | |||||||
POCPu: 58.21952453211937
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| Property / Comparison to close relatives: Fusobacterium russii / qualifier | |||||||
ANI %: 78.5788
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| Property / Comparison to close relatives: Fusobacterium russii / qualifier | |||||||
G+C Difference (%): 1.2200000000000024
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Streptobacillus ratti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Streptobacillus ratti / qualifier | |||||||
16S Identity %: 22.893165228931654
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| Property / Comparison to close relatives: Streptobacillus ratti / qualifier | |||||||
POCPu: 15.092748735244518
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| Property / Comparison to close relatives: Streptobacillus ratti / qualifier | |||||||
G+C Difference (%): 1.2999999999999972
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pseudoleptotrichia goodfellowii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pseudoleptotrichia goodfellowii / qualifier | |||||||
16S Identity %: 22.71523178807947
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| Property / Comparison to close relatives: Pseudoleptotrichia goodfellowii / qualifier | |||||||
POCPu: 21.207360861759426
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| Property / Comparison to close relatives: Pseudoleptotrichia goodfellowii / qualifier | |||||||
G+C Difference (%): 4.360000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haliovirga abyssi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haliovirga abyssi / qualifier | |||||||
16S Identity %: 22.65193370165746
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| Property / Comparison to close relatives: Haliovirga abyssi / qualifier | |||||||
POCPu: 17.44520699579367
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| Property / Comparison to close relatives: Haliovirga abyssi / qualifier | |||||||
G+C Difference (%): 0.9299999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Streptobacillus notomytis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Streptobacillus notomytis / qualifier | |||||||
16S Identity %: 22.413793103448278
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| Property / Comparison to close relatives: Streptobacillus notomytis / qualifier | |||||||
POCPu: 14.556118368435083
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| Property / Comparison to close relatives: Streptobacillus notomytis / qualifier | |||||||
G+C Difference (%): 0.5500000000000007
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Streptobacillus canis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Streptobacillus canis / qualifier | |||||||
16S Identity %: 22.41042345276873
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| Property / Comparison to close relatives: Streptobacillus canis / qualifier | |||||||
POCPu: 15.484041150092324
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| Property / Comparison to close relatives: Streptobacillus canis / qualifier | |||||||
G+C Difference (%): 0.7299999999999969
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium varium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium varium / qualifier | |||||||
16S Identity %: 22.207621550591327
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| Property / Comparison to close relatives: Fusobacterium varium / qualifier | |||||||
POCPu: 31.902819648873916
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| Property / Comparison to close relatives: Fusobacterium varium / qualifier | |||||||
ANI %: 77.22
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| Property / Comparison to close relatives: Fusobacterium varium / qualifier | |||||||
G+C Difference (%): 2
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium nucleatum subsp. polymorphum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium nucleatum subsp. polymorphum / qualifier | |||||||
16S Identity %: 21.89830508474576
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sneathia sanguinegens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sneathia sanguinegens / qualifier | |||||||
16S Identity %: 21.887287024901703
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| Property / Comparison to close relatives: Sneathia sanguinegens / qualifier | |||||||
POCPu: 14.785879629629632
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| Property / Comparison to close relatives: Sneathia sanguinegens / qualifier | |||||||
G+C Difference (%): 0.5799999999999983
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caviibacter abscessus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caviibacter abscessus / qualifier | |||||||
16S Identity %: 21.733420879842416
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| Property / Comparison to close relatives: Caviibacter abscessus / qualifier | |||||||
POCPu: 15.678214914856136
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| Property / Comparison to close relatives: Caviibacter abscessus / qualifier | |||||||
G+C Difference (%): 0.8299999999999983
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Streptobacillus moniliformis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Streptobacillus moniliformis / qualifier | |||||||
16S Identity %: 21.662303664921467
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| Property / Comparison to close relatives: Streptobacillus moniliformis / qualifier | |||||||
POCPu: 14.951045250066155
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| Property / Comparison to close relatives: Streptobacillus moniliformis / qualifier | |||||||
G+C Difference (%): 1.0499999999999972
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sneathia vaginalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sneathia vaginalis / qualifier | |||||||
16S Identity %: 21.52641878669276
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| Property / Comparison to close relatives: Sneathia vaginalis / qualifier | |||||||
POCPu: 15.012794995735002
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| Property / Comparison to close relatives: Sneathia vaginalis / qualifier | |||||||
G+C Difference (%): 1.1000000000000014
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium necrophorum subsp. necrophorum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium necrophorum subsp. necrophorum / qualifier | |||||||
16S Identity %: 21.144781144781145
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Oceanivirga salmonicida / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Oceanivirga salmonicida / qualifier | |||||||
16S Identity %: 21.090670170827856
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| Property / Comparison to close relatives: Oceanivirga salmonicida / qualifier | |||||||
POCPu: 15.041995418681598
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| Property / Comparison to close relatives: Oceanivirga salmonicida / qualifier | |||||||
G+C Difference (%): 1.889999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Propionigenium maris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Propionigenium maris / qualifier | |||||||
16S Identity %: 20.958904109589042
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| Property / Comparison to close relatives: Propionigenium maris / qualifier | |||||||
POCPu: 21.159183673469386
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| Property / Comparison to close relatives: Propionigenium maris / qualifier | |||||||
G+C Difference (%): 13.550000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ilyobacter insuetus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ilyobacter insuetus / qualifier | |||||||
16S Identity %: 20.8984375
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ilyobacter tartaricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ilyobacter tartaricus / qualifier | |||||||
16S Identity %: 20.833333333333336
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ilyobacter polytropus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ilyobacter polytropus / qualifier | |||||||
16S Identity %: 20.808871493803
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| Property / Comparison to close relatives: Ilyobacter polytropus / qualifier | |||||||
POCPu: 24.262863750240893
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| Property / Comparison to close relatives: Ilyobacter polytropus / qualifier | |||||||
G+C Difference (%): 7.039999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium canifelinum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium canifelinum / qualifier | |||||||
16S Identity %: 20.698924731182796
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| Property / Comparison to close relatives: Fusobacterium canifelinum / qualifier | |||||||
POCPu: 72.43085225995053
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| Property / Comparison to close relatives: Fusobacterium canifelinum / qualifier | |||||||
ANI %: 90.7175
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| Property / Comparison to close relatives: Fusobacterium canifelinum / qualifier | |||||||
G+C Difference (%): 0.10999999999999943
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium perfoetens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium perfoetens / qualifier | |||||||
16S Identity %: 20.416386836803223
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| Property / Comparison to close relatives: Fusobacterium perfoetens / qualifier | |||||||
POCPu: 31.83996166746526
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| Property / Comparison to close relatives: Fusobacterium perfoetens / qualifier | |||||||
ANI %: 76.3392
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| Property / Comparison to close relatives: Fusobacterium perfoetens / qualifier | |||||||
G+C Difference (%): 1.3699999999999974
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium nucleatum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium nucleatum / qualifier | |||||||
POCPu: 76.70267731329263
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| Property / Comparison to close relatives: Fusobacterium nucleatum / qualifier | |||||||
ANI %: 92.2869
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| Property / Comparison to close relatives: Fusobacterium nucleatum / qualifier | |||||||
G+C Difference (%): 0.18999999999999773
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Fusobacterium necrophorum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Fusobacterium necrophorum / qualifier | |||||||
POCPu: 44.25800828067117
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| Property / Comparison to close relatives: Fusobacterium necrophorum / qualifier | |||||||
G+C Difference (%): 6.700000000000003
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| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH26 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 3
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| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH77 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH77 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH4 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH73 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH73 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 15
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT30 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT30 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 12
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT83 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT83 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT41 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT41 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT5 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT104 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT104 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE11 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep / rank | |||||||
Normal rank | |||||||
| Property / Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / rank | |||||||
Normal rank | |||||||
| Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: V/A-type ATPase, prokaryotes / rank | |||||||
Normal rank | |||||||
| Property / Pathway: V/A-type ATPase, prokaryotes / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: CAM (Crassulacean acid metabolism), light / rank | |||||||
Normal rank | |||||||
| Property / Pathway: CAM (Crassulacean acid metabolism), light / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Sulfur reduction, sulfur => sulfide / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycogen degradation, glycogen => glucose-6P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycogen degradation, glycogen => glucose-6P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tyrosine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tyrosine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutamine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutamine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lysine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lysine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (pay-off phase) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (pay-off phase) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:formate lyase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:formate lyase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate consumption II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate consumption II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Butyrate production II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Butyrate production II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Propionate production II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Propionate production II / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 8.9
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 1.23
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 2.2
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 4.25
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 36.6
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 1.13
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 5.6
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 2.7
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 1.22
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 17.5
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0.21
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 1.7
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 2.5
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0.09
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 5.7
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0.38
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 2.1
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0.1
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 71.2
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 15.5
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 2.9
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 12
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.06
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 2.7
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 2.3
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.16
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 60.7
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 10.26
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 3.6
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0.2
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 36.7
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0.78
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 24.3
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 2.66
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: HMP_2012__SRS015947__bin_5.fa / rank | |||||||
Normal rank | |||||||
| Property / MAGs: HMP_2012__SRS015947__bin_5.fa / qualifier | |||||||
| Property / MAGs | |||||||
| Property / MAGs: CM_periimplantitis__SP_163SPI_T016__bin_2.fa / rank | |||||||
Normal rank | |||||||
| Property / MAGs: CM_periimplantitis__SP_163SPI_T016__bin_2.fa / qualifier | |||||||
| Property / MAGs | |||||||
| Property / MAGs: 3300011819_1.fna / rank | |||||||
Normal rank | |||||||
| Property / MAGs: 3300011819_1.fna / qualifier | |||||||
Latest revision as of 01:05, 16 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_000182945.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
26.31205673758865
39.34229476716274
77.2755
1.7200000000000024
0 references
26.156299840510368
21.07728337236534
75.7142
2.4899999999999984
0 references
0 references
0 references
25.620437956204377
31.37111517367459
77.1427
3.2200000000000024
0 references
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25.370121130551816
37.35774369124196
77.106
1.8400000000000034
0 references
25.148908007941763
70.47496790757381
92.1813
0.36999999999999744
0 references
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24.93438320209974
66.0915867944622
85.0632
0.4499999999999993
0 references
24.866666666666667
69.70908283366644
88.6531
0.22999999999999687
0 references
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24.452054794520546
56.36910732196589
79.5362
0.8800000000000026
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24.37417654808959
33.82807668521954
77.1181
1.7000000000000028
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22.962962962962962
58.21952453211937
78.5788
1.2200000000000024
0 references
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20.698924731182796
72.43085225995053
90.7175
0.10999999999999943
0 references
20.416386836803223
31.83996166746526
76.3392
1.3699999999999974
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