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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(72 intermediate revisions by the same user not shown)
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 3.3
Amount3.3
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_002509385.1_ASM250938v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002509385.1_ASM250938v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003138595.1_20110800_S3D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003138595.1_20110800_S3D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003159635.1_20120700_S3D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003159635.1_20120700_S3D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003159695.1_20120700_S2X_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003159695.1_20120700_S2X_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003163595.1_20120800_S2X_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003163595.1_20120800_S2X_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003139855.1_20110800_S2M_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003139855.1_20110800_S2M_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003163455.1_20120800_S1X_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003163455.1_20120800_S1X_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003159405.1_20120700_S3X_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003159405.1_20120700_S3X_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003139895.1_20110800_S2D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003139895.1_20110800_S2D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003165375.1_20120700_S1D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003165375.1_20120700_S1D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003139235.1_20110800_S1D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003139235.1_20110800_S1D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003166275.1_20110700_S2M_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003166275.1_20110700_S2M_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003141075.1_20120800_S1D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003141075.1_20120800_S1D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_003156255.1_20120600_S2D_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_003156255.1_20120600_S2D_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300009764_11.fna / rank
 
Normal rank
Property / MAGs: 3300009764_11.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300014156_12.fna / rank
 
Normal rank
Property / MAGs: 3300014156_12.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300014158_13.fna / rank
 
Normal rank
Property / MAGs: 3300014158_13.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300014162_12.fna / rank
 
Normal rank
Property / MAGs: 3300014162_12.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017946_10.fna / rank
 
Normal rank
Property / MAGs: 3300017946_10.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018008_11.fna / rank
 
Normal rank
Property / MAGs: 3300018008_11.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018033_10.fna / rank
 
Normal rank
Property / MAGs: 3300018033_10.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018035_13.fna / rank
 
Normal rank
Property / MAGs: 3300018035_13.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018037_8.fna / rank
 
Normal rank
Property / MAGs: 3300018037_8.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018044_9.fna / rank
 
Normal rank
Property / MAGs: 3300018044_9.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018046_11.fna / rank
 
Normal rank
Property / MAGs: 3300018046_11.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300018047_7.fna / rank
 
Normal rank
Property / MAGs: 3300018047_7.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300023088_11.fna / rank
 
Normal rank
Property / MAGs: 3300023088_11.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025432_14.fna / rank
 
Normal rank
Property / MAGs: 3300025432_14.fna / qualifier
 

Latest revision as of 21:56, 26 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_003139855.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanococcoides methylutens
      16S Identity %
      26.67578659370725
      POCPu
      15.696686491079015
      G+C Difference (%)
      9.229999999999997
      0 references
      Methanolobus zinderi
      16S Identity %
      26.430517711171664
      POCPu
      15.607171964140178
      G+C Difference (%)
      7.669999999999995
      0 references
      Methanosarcina horonobensis
      16S Identity %
      26.367461430575034
      POCPu
      13.025210084033615
      G+C Difference (%)
      10.419999999999995
      0 references
      Methanosalsum natronophilum
      16S Identity %
      26.21359223300971
      POCPu
      16.42569329224935
      G+C Difference (%)
      17.389999999999993
      0 references
      Methanosalsum zhilinae
      16S Identity %
      25.84507042253521
      POCPu
      18.14780168381665
      G+C Difference (%)
      12.57
      0 references
      Methanococcoides burtonii
      16S Identity %
      25.59564329475834
      POCPu
      15.069901315789474
      G+C Difference (%)
      10.969999999999999
      0 references
      Methanosarcina subterranea
      16S Identity %
      25.24339360222531
      0 references
      Methanosarcina siciliae
      16S Identity %
      25.187713310580207
      POCPu
      12.885802469135802
      G+C Difference (%)
      8.79
      0 references
      Methanolobus mangrovi
      16S Identity %
      25.102040816326532
      POCPu
      16.463414634146343
      G+C Difference (%)
      10.119999999999997
      0 references
      Methanospirillum hungatei
      16S Identity %
      24.914675767918087
      POCPu
      9.92406851492142
      G+C Difference (%)
      6.579999999999998
      0 references
      Methanohalophilus mahii
      16S Identity %
      24.829931972789115
      POCPu
      16.71361502347418
      G+C Difference (%)
      9.11
      0 references
      Methanosarcina vacuolata
      16S Identity %
      24.7612551159618
      POCPu
      14.18546365914787
      G+C Difference (%)
      12.019999999999996
      0 references
      Methanolacinia petrolearia
      16S Identity %
      24.403544648943424
      POCPu
      10.788954635108482
      G+C Difference (%)
      4.329999999999998
      0 references
      Methanolobus sediminis
      16S Identity %
      24.353741496598637
      POCPu
      15.97812879708384
      G+C Difference (%)
      10.79
      0 references
      Methanohalobium evestigatum
      16S Identity %
      24.19465387251542
      POCPu
      15.495379325166558
      G+C Difference (%)
      15.309999999999995
      0 references
      Methanoregula boonei
      16S Identity %
      24.152249134948097
      POCPu
      13.313795268997278
      G+C Difference (%)
      2.780000000000001
      0 references
      Methanoplanus endosymbiosus
      16S Identity %
      24.128503075871496
      POCPu
      10.209270486993937
      G+C Difference (%)
      9.449999999999996
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      24.098025867937373
      POCPu
      17.664449371766445
      G+C Difference (%)
      1.8200000000000003
      0 references
      Methanogenium cariaci
      16S Identity %
      24.04109589041096
      POCPu
      9.833281877122568
      G+C Difference (%)
      0.3300000000000054
      0 references
      Methanovulcanius yangii
      16S Identity %
      24
      POCPu
      12.603722807804441
      G+C Difference (%)
      4.5
      0 references
      Methanoplanus limicola
      16S Identity %
      23.917525773195877
      POCPu
      10.096244574448008
      G+C Difference (%)
      9.54
      0 references
      Methanoculleus palmolei
      16S Identity %
      23.829489867225718
      0 references
      Methanocella arvoryzae
      16S Identity %
      23.741496598639454
      POCPu
      16.269101751770407
      G+C Difference (%)
      2.8700000000000045
      0 references
      Methanoculleus marisnigri
      16S Identity %
      23.686006825938566
      POCPu
      13.805496828752641
      G+C Difference (%)
      10.330000000000005
      0 references
      Methanoculleus taiwanensis
      16S Identity %
      23.65819209039548
      POCPu
      13.554155659418818
      G+C Difference (%)
      8.240000000000002
      0 references
      Methanoculleus chikugoensis
      16S Identity %
      23.636363636363637
      POCPu
      13.60628618693135
      G+C Difference (%)
      10.130000000000003
      0 references
      Methanogenium frigidum
      16S Identity %
      23.63013698630137
      0 references
      Methanogenium marinum
      16S Identity %
      23.60724233983287
      POCPu
      10.948571428571428
      G+C Difference (%)
      3.549999999999997
      0 references
      Methanomethylovorans thermophila
      16S Identity %
      23.494860499265783
      0 references
      Methanoculleus sediminis
      16S Identity %
      23.42857142857143
      POCPu
      13.952502120441052
      G+C Difference (%)
      10.57
      0 references
      Methanoculleus horonobensis
      16S Identity %
      23.393854748603353
      POCPu
      13.620836891545688
      G+C Difference (%)
      10.310000000000002
      0 references
      Methanolinea mesophila
      16S Identity %
      23.302358827734096
      POCPu
      12.86672254819782
      G+C Difference (%)
      5.670000000000002
      0 references
      Methanoculleus hydrogenitrophicus
      16S Identity %
      23.291492329149232
      0 references
      Methanocalculus halotolerans
      16S Identity %
      23.26869806094183
      0 references
      Methanofollis liminatans
      16S Identity %
      23.230240549828178
      POCPu
      13.036057179432472
      G+C Difference (%)
      9.230000000000004
      0 references
      Methanoculleus thermophilus
      16S Identity %
      23.225361819434873
      POCPu
      14.390406395736177
      G+C Difference (%)
      7.590000000000003
      0 references
      Methanococcoides orientis
      16S Identity %
      23.197278911564627
      POCPu
      16.05902777777778
      G+C Difference (%)
      9.049999999999997
      0 references
      Methanosphaerula palustris
      16S Identity %
      23.187414500683996
      POCPu
      13.464598249801114
      G+C Difference (%)
      3.6200000000000045
      0 references
      Methanofollis ethanolicus
      16S Identity %
      23.17596566523605
      POCPu
      12.166293050743835
      G+C Difference (%)
      8.600000000000001
      0 references
      Methanoculleus receptaculi
      16S Identity %
      23.12267657992565
      POCPu
      13.872697598507811
      G+C Difference (%)
      7.3600000000000065
      0 references
      Methanolinea tarda
      16S Identity %
      23.098394975575715
      POCPu
      13.244533802462929
      G+C Difference (%)
      3.1000000000000014
      0 references
      Methanofollis fontis
      16S Identity %
      22.944960686204432
      POCPu
      13.053048646268985
      G+C Difference (%)
      7.810000000000002
      0 references
      Methanocalculus alkaliphilus
      16S Identity %
      22.819260293091418
      POCPu
      12.406441369925153
      G+C Difference (%)
      1.4299999999999997
      0 references
      Methanofollis tationis
      16S Identity %
      22.72406492589979
      POCPu
      13.042525208241997
      G+C Difference (%)
      9.410000000000004
      0 references
      Methanothrix soehngenii
      16S Identity %
      22.479564032697546
      POCPu
      13.800264300547479
      G+C Difference (%)
      0.7399999999999949
      0 references
      Methanocella paludicola
      16S Identity %
      22.17573221757322
      POCPu
      16.258015843078084
      G+C Difference (%)
      3.190000000000005
      0 references
      Methanolobus bombayensis
      16S Identity %
      22.10095497953615
      POCPu
      15.017598748533437
      G+C Difference (%)
      12.009999999999998
      0 references
      Methanohalophilus halophilus
      16S Identity %
      21.804511278195488
      POCPu
      16.5616981572195
      G+C Difference (%)
      9.329999999999998
      0 references
      Methanosarcina semesiae
      16S Identity %
      21.730103806228374
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      21.730103806228374
      POCPu
      15.595579205894392
      G+C Difference (%)
      9.86
      0 references
      CAZyme
      GH130
      Occurance
      2
      0 references
      GH0
      Occurance
      4
      0 references
      GH6
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GH1
      Occurance
      1
      0 references
      GT81
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT4
      Occurance
      41
      0 references
      GT2
      Occurance
      30
      0 references
      GT1
      Occurance
      1
      0 references
      GT0
      Occurance
      2
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      Pathway
      MAGs
       
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