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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
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Property / Pathway
 
Property / Pathway: Entner-Doudoroff pathway / rank
 
Normal rank
Property / Pathway: Entner-Doudoroff pathway / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (oxidative phase) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (oxidative phase) / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate dehydrogenase complex / rank
 
Normal rank
Property / Pathway: Pyruvate dehydrogenase complex / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Formate conversion / rank
 
Normal rank
Property / Pathway: Formate conversion / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 5.8
Amount5.8
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.93
Amount0.93
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 10.2
Amount10.2
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.36
Amount0.36
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 29.5
Amount29.5
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.28
Amount0.28
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 3
Amount3
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.25
Amount0.25
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 1.1
Amount1.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.26
Amount0.26
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 5
Amount5
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.57
Amount0.57
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 3
Amount3
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.27
Amount0.27
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.7
Amount2.7
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 20100303_Bin_88_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100303_Bin_88_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100330_Bin_68-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100330_Bin_68-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100413_Bin_46_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100413_Bin_46_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100420_Bin_72_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100420_Bin_72_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100423_Bin_9_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100423_Bin_9_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100430_Bin_43_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100430_Bin_43_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100511_Bin_52_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100511_Bin_52_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20100518_Bin_121_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20100518_Bin_121_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110321_Bin_20_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110321_Bin_20_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110328_Bin_4_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110328_Bin_4_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110331_Bin_54_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110331_Bin_54_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110407_Bin_55_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110407_Bin_55_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110414_Bin_23_3-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110414_Bin_23_3-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110421_Bin_79_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110421_Bin_79_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110426_Bin_54_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110426_Bin_54_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110428_Bin_5_1_3-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110428_Bin_5_1_3-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110506_Bin_88_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110506_Bin_88_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110509_Bin_16_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110509_Bin_16_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110512_Bin_29_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110512_Bin_29_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20110526_Bin_150_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20110526_Bin_150_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20120308_Bin_88_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20120308_Bin_88_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20120405_Bin_125_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20120405_Bin_125_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20120416_Bin_12_2_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20120416_Bin_12_2_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20120426_Bin_84_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20120426_Bin_84_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20120524_Bin_124_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20120524_Bin_124_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160316_Bin_43_8-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160316_Bin_43_8-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160321_Bin_52_5-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160321_Bin_52_5-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160412_Bin_12_7-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160412_Bin_12_7-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160419_Bin_5_2-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160419_Bin_5_2-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160426_Bin_23_1-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160426_Bin_23_1-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160502_Bin_56_3-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160502_Bin_56_3-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160512_Bin_4_4-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160512_Bin_4_4-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 20160517_Bin_17_7-contigs.fa / rank
 
Normal rank
Property / MAGs: 20160517_Bin_17_7-contigs.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025881_63.fna / rank
 
Normal rank
Property / MAGs: 3300025881_63.fna / qualifier
 

Latest revision as of 23:11, 15 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000168995.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methyloradius palustris
      16S Identity %
      95.14363885088919
      POCPu
      34.418722971254134
      G+C Difference (%)
      8.479999999999997
      0 references
      Methylotenera oryzisoli
      16S Identity %
      94.80614484272128
      POCPu
      36.75548589341693
      G+C Difference (%)
      6.950000000000003
      0 references
      Methylotenera mobilis
      16S Identity %
      94.69200524246396
      POCPu
      37.94703794703795
      G+C Difference (%)
      7.579999999999998
      0 references
      Methylophilus methylotrophus
      16S Identity %
      94.26621160409556
      POCPu
      34.65667915106118
      G+C Difference (%)
      11.670000000000002
      0 references
      Methylophilus quaylei
      16S Identity %
      94.17071478140181
      0 references
      Methylotenera versatilis
      16S Identity %
      94.16775884665793
      POCPu
      33.430444282592866
      G+C Difference (%)
      4.710000000000001
      0 references
      Methylophilus glucosoxydans
      16S Identity %
      94.13892908827786
      0 references
      Methylophilus leisingeri
      16S Identity %
      94.0533151059467
      0 references
      Methylophilus aquaticus
      16S Identity %
      94.02250351617441
      POCPu
      33.560477001703575
      G+C Difference (%)
      11.689999999999998
      0 references
      Methylophilus luteus
      16S Identity %
      93.93083980239943
      0 references
      Methylophilus flavus
      16S Identity %
      93.91182645206439
      0 references
      Methylovorus glucosotrophus
      16S Identity %
      93.7949052906597
      POCPu
      32.91543756145526
      G+C Difference (%)
      17.32
      0 references
      Methylophilus rhizosphaerae
      16S Identity %
      93.68346344925479
      POCPu
      33.91915641476274
      G+C Difference (%)
      13.420000000000002
      0 references
      Methylobacillus rhizosphaerae
      16S Identity %
      93.66197183098592
      POCPu
      34.89018626633305
      G+C Difference (%)
      14.450000000000003
      0 references
      Methylovorus menthalis
      16S Identity %
      93.41359773371106
      POCPu
      32.59059745347698
      G+C Difference (%)
      16.57
      0 references
      Methylobacillus arboreus
      16S Identity %
      93.1899641577061
      POCPu
      30.345494080695822
      G+C Difference (%)
      16.29
      0 references
      Methylobacillus methanolivorans
      16S Identity %
      93.06518723994452
      0 references
      Methylobacillus flagellatus
      16S Identity %
      92.99499642601859
      POCPu
      31.122326363854842
      G+C Difference (%)
      17.79
      0 references
      Methylobacillus glycogenes
      16S Identity %
      92.94578706727629
      POCPu
      28.396822163373397
      G+C Difference (%)
      15.509999999999998
      0 references
      Pseudomethylobacillus aquaticus
      16S Identity %
      92.59510869565217
      POCPu
      37.11367911851653
      G+C Difference (%)
      20.4
      0 references
      Methylobacillus caricis
      16S Identity %
      92.48226950354609
      POCPu
      31.5185546875
      G+C Difference (%)
      13.810000000000002
      0 references
      Novimethylophilus kurashikiensis
      16S Identity %
      92.43697478991596
      POCPu
      27.11864406779661
      G+C Difference (%)
      18.22
      0 references
      Methylovorus mays
      16S Identity %
      92.40947075208913
      POCPu
      32.23460979156568
      G+C Difference (%)
      17.18
      0 references
      Methylobacillus gramineus
      16S Identity %
      92.23093371347113
      POCPu
      31.59036144578313
      G+C Difference (%)
      12.770000000000003
      0 references
      Methylobacillus pratensis
      16S Identity %
      91.96556671449068
      0 references
      Sulfuricella denitrificans
      16S Identity %
      91.53645833333334
      POCPu
      25.295186194368757
      G+C Difference (%)
      18.189999999999998
      0 references
      Sulfuriferula multivorans
      16S Identity %
      91.51266255989049
      POCPu
      21.222725401399753
      G+C Difference (%)
      18.92
      0 references
      Sulfurimicrobium lacus
      16S Identity %
      91.51266255989049
      POCPu
      22.0485067147725
      G+C Difference (%)
      22.270000000000003
      0 references
      Sulfuriferula nivalis
      16S Identity %
      91.23287671232877
      POCPu
      21.60900021226916
      G+C Difference (%)
      9.880000000000003
      0 references
      Sulfuriferula thiophila
      16S Identity %
      91.23287671232877
      POCPu
      24.75562072336266
      G+C Difference (%)
      13.979999999999997
      0 references
      Undibacterium rugosum
      16S Identity %
      90.76923076923077
      POCPu
      17.581967213114755
      G+C Difference (%)
      13.729999999999997
      0 references
      Thiobacter subterraneus
      16S Identity %
      90.49586776859503
      0 references
      Denitratisoma oestradiolicum
      16S Identity %
      90.40268456375838
      POCPu
      18.391023202738683
      G+C Difference (%)
      24.200000000000003
      0 references
      Ampullimonas aquatilis
      16S Identity %
      90.23102310231023
      0 references
      Undibacterium luofuense
      16S Identity %
      90.16064257028113
      POCPu
      16.560877091748413
      G+C Difference (%)
      13.979999999999997
      0 references
      Undibacterium griseum
      16S Identity %
      90.10033444816054
      POCPu
      18.717162872154116
      G+C Difference (%)
      15.399999999999999
      0 references
      Thiobacillus thioparus
      16S Identity %
      90.0990099009901
      POCPu
      21.96713932027909
      G+C Difference (%)
      24.369999999999997
      0 references
      Undibacterium rivi
      16S Identity %
      90.01340482573727
      POCPu
      18.24802330420308
      G+C Difference (%)
      12.020000000000003
      0 references
      Massilia oculi
      16S Identity %
      90.00653167864141
      POCPu
      13.333333333333334
      G+C Difference (%)
      27.619999999999997
      0 references
      Herbaspirillum chlorophenolicum
      16S Identity %
      89.95929443690638
      POCPu
      14.790619765494137
      G+C Difference (%)
      23.299999999999997
      0 references
      Ephemeroptericola cinctiostellae
      16S Identity %
      89.91486574983628
      POCPu
      19.686274509803923
      G+C Difference (%)
      10.32
      0 references
      Leeia oryzae
      16S Identity %
      89.78919631093544
      POCPu
      18.909318846636022
      G+C Difference (%)
      16.619999999999997
      0 references
      Oxalobacter vibrioformis
      16S Identity %
      89.68462549277267
      POCPu
      19.95926680244399
      G+C Difference (%)
      13.899999999999999
      0 references
      Chitinimonas taiwanensis
      16S Identity %
      89.65291421087099
      POCPu
      18.680223285486445
      G+C Difference (%)
      24.93
      0 references
      Propionivibrio limicola
      16S Identity %
      89.54931417374266
      POCPu
      21.51204388266158
      G+C Difference (%)
      22.380000000000003
      0 references
      Orrella dioscoreae
      16S Identity %
      89.51507208387942
      POCPu
      14.037245256500352
      G+C Difference (%)
      29.500000000000007
      0 references
      Rhodocyclus gracilis
      16S Identity %
      89.374185136897
      POCPu
      23.45054389071591
      G+C Difference (%)
      26.57
      0 references
      Sulfuritalea hydrogenivorans
      16S Identity %
      89.30899608865711
      POCPu
      19.697897530108186
      G+C Difference (%)
      25.340000000000003
      0 references
      Herbaspirillum huttiense
      POCPu
      14.543679843826258
      G+C Difference (%)
      24.9
      0 references
      CAZyme
      GH13
      Occurance
      3
      0 references
      GH6
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH23
      Occurance
      2
      0 references
      GH102
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH3
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH103
      Occurance
      1
      0 references
      GH114
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT51
      Occurance
      2
      0 references
      GT41
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT4
      Occurance
      13
      0 references
      GT0
      Occurance
      3
      0 references
      GT1
      Occurance
      1
      0 references
      GT9
      Occurance
      3
      0 references
      GT28
      Occurance
      5
      0 references
      GT2
      Occurance
      9
      0 references
      GT32
      Occurance
      1
      0 references
      GT30
      Occurance
      1
      0 references
      GT81
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT104
      Occurance
      1
      0 references
      GT25
      Occurance
      1
      0 references
      GT11
      Occurance
      1
      0 references
      GT20
      Occurance
      1
      0 references
      GT26
      Occurance
      1
      0 references
      CE11
      Occurance
      2
      0 references
      CBM13
      Occurance
      5
      0 references
      CBM50
      Occurance
      6
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
      MAGs
       
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