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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
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Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank
 
Normal rank
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank
 
Normal rank
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / rank
 
Normal rank
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank
 
Normal rank
Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan degradation / rank
 
Normal rank
Property / Pathway: Tryptophan degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Tyrosine degradation II / rank
 
Normal rank
Property / Pathway: Tyrosine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation II / rank
 
Normal rank
Property / Pathway: Aspartate degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamate degradation III / rank
 
Normal rank
Property / Pathway: Glutamate degradation III / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine degradation / rank
 
Normal rank
Property / Pathway: Glycine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Proline degradation / rank
 
Normal rank
Property / Pathway: Proline degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Serine degradation / rank
 
Normal rank
Property / Pathway: Serine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine degradation I / rank
 
Normal rank
Property / Pathway: Lysine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Pathway
 
Property / Pathway: Butyrate production II / rank
 
Normal rank
Property / Pathway: Butyrate production II / qualifier
 
Property / Pathway
 
Property / Pathway: Nitrate reduction (dissimilatory) / rank
 
Normal rank
Property / Pathway: Nitrate reduction (dissimilatory) / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 2.2
Amount2.2
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 2.4
Amount2.4
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.97
Amount0.97
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 40
Amount40
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.44
Amount0.44
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 28.8
Amount28.8
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 9.4
Amount9.4
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / MAGs
 
Property / MAGs: CM_periimplantitis__SP_125SPI_T016__bin_4.fa / rank
 
Normal rank
Property / MAGs: CM_periimplantitis__SP_125SPI_T016__bin_4.fa / qualifier
 
Property / MAGs
 
Property / MAGs: 3300006249_13.fna / rank
 
Normal rank
Property / MAGs: 3300006249_13.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300007499_5.fna / rank
 
Normal rank
Property / MAGs: 3300007499_5.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300007500_17.fna / rank
 
Normal rank
Property / MAGs: 3300007500_17.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300007646_15.fna / rank
 
Normal rank
Property / MAGs: 3300007646_15.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300007666_10.fna / rank
 
Normal rank
Property / MAGs: 3300007666_10.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300008139_11.fna / rank
 
Normal rank
Property / MAGs: 3300008139_11.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300008480_20.fna / rank
 
Normal rank
Property / MAGs: 3300008480_20.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300008486_17.fna / rank
 
Normal rank
Property / MAGs: 3300008486_17.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300008541_20.fna / rank
 
Normal rank
Property / MAGs: 3300008541_20.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300008679_14.fna / rank
 
Normal rank
Property / MAGs: 3300008679_14.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300008743_14.fna / rank
 
Normal rank
Property / MAGs: 3300008743_14.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300011970_9.fna / rank
 
Normal rank
Property / MAGs: 3300011970_9.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300011981_14.fna / rank
 
Normal rank
Property / MAGs: 3300011981_14.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300011985_23.fna / rank
 
Normal rank
Property / MAGs: 3300011985_23.fna / qualifier
 

Latest revision as of 22:47, 15 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000163695.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Paludibacter propionicigenes
      16S Identity %
      89.75545274289492
      POCPu
      22.570971611355457
      G+C Difference (%)
      4.039999999999999
      0 references
      Paludibacter jiangxiensis
      16S Identity %
      87.66189502385822
      POCPu
      22.283609576427256
      G+C Difference (%)
      0.020000000000003126
      0 references
      Fermentimonas caenicola
      16S Identity %
      87.63227513227513
      0 references
      Dysgonomonas mossii
      16S Identity %
      87.34006734006734
      POCPu
      19.703787026621672
      G+C Difference (%)
      5.460000000000001
      0 references
      Microbacter margulisiae
      16S Identity %
      87.23835246455099
      POCPu
      21.25256673511294
      G+C Difference (%)
      3.039999999999999
      0 references
      Dysgonomonas gadei
      16S Identity %
      87.16931216931218
      POCPu
      17.704376548307184
      G+C Difference (%)
      3.3699999999999974
      0 references
      Dysgonomonas oryzarvi
      16S Identity %
      87.09677419354838
      0 references
      Dysgonomonas capnocytophagoides
      16S Identity %
      87.07070707070706
      POCPu
      18.38409629764727
      G+C Difference (%)
      5.18
      0 references
      Proteiniphilum propionicum
      16S Identity %
      87.05293276108726
      POCPu
      19.115980355119003
      G+C Difference (%)
      1.509999999999998
      0 references
      Dysgonomonas hofstadii
      16S Identity %
      86.96245733788396
      POCPu
      18.022589621869372
      G+C Difference (%)
      3.6299999999999955
      0 references
      Parabacteroides goldsteinii
      16S Identity %
      86.83862433862434
      POCPu
      15.528128587830082
      G+C Difference (%)
      0.23000000000000398
      0 references
      Proteiniphilum acetatigenes
      16S Identity %
      86.80738786279683
      POCPu
      18.252865578325807
      G+C Difference (%)
      0.240000000000002
      0 references
      Proteiniphilum saccharofermentans
      16S Identity %
      86.73758865248227
      POCPu
      19.182156133828997
      G+C Difference (%)
      0.730000000000004
      0 references
      Macellibacteroides fermentans
      16S Identity %
      86.69786096256684
      POCPu
      19.857610159707523
      G+C Difference (%)
      1.019999999999996
      0 references
      Parabacteroides gordonii
      16S Identity %
      86.63967611336032
      POCPu
      15.102377353304933
      G+C Difference (%)
      1.2899999999999991
      0 references
      Parabacteroides chartae
      16S Identity %
      86.57627118644068
      0 references
      Dysgonomonas termitidis
      16S Identity %
      86.3973063973064
      0 references
      Dysgonomonas alginatilytica
      16S Identity %
      86.22837370242215
      POCPu
      16.343223736968724
      G+C Difference (%)
      6.159999999999997
      0 references
      Barnesiella propionica
      16S Identity %
      86.22280817402769
      POCPu
      21.58213316635358
      G+C Difference (%)
      2.6499999999999986
      0 references
      Parabacteroides johnsonii
      16S Identity %
      86.17666891436278
      POCPu
      18.252060439560438
      G+C Difference (%)
      2.3100000000000023
      0 references
      Petrimonas mucosa
      16S Identity %
      86.15384615384616
      POCPu
      20.07291877658497
      G+C Difference (%)
      5.07
      0 references
      Alistipes putredinis
      16S Identity %
      86.09271523178808
      POCPu
      19.91119420425333
      G+C Difference (%)
      10.350000000000001
      0 references
      Tannerella forsythia
      16S Identity %
      86.04180714767364
      POCPu
      23.21199143468951
      G+C Difference (%)
      4.240000000000002
      0 references
      Parabacteroides merdae
      16S Identity %
      85.98382749326146
      POCPu
      18.935443265599712
      G+C Difference (%)
      2.4200000000000017
      0 references
      Seramator thermalis
      16S Identity %
      85.89211618257261
      POCPu
      22.06583427922815
      G+C Difference (%)
      1
      0 references
      Parabacteroides leei
      16S Identity %
      85.89211618257261
      POCPu
      15.626733222407099
      G+C Difference (%)
      0.44000000000000483
      0 references
      Bacteroides cellulosilyticus
      16S Identity %
      85.818422796554
      POCPu
      16.05986472873795
      G+C Difference (%)
      0.18999999999999773
      0 references
      Coprobacter tertius
      16S Identity %
      85.7707509881423
      POCPu
      22.322580645161292
      G+C Difference (%)
      3.6700000000000017
      0 references
      Parabacteroides chongii
      16S Identity %
      85.68601583113457
      POCPu
      16.15453460620525
      G+C Difference (%)
      0.8200000000000003
      0 references
      Alistipes onderdonkii subsp. vulgaris
      16S Identity %
      85.62585969738652
      0 references
      Alistipes dispar
      16S Identity %
      85.61643835616438
      POCPu
      18.240294050080404
      G+C Difference (%)
      18.39
      0 references
      Tannerella serpentiformis
      16S Identity %
      85.61549100968188
      POCPu
      24.352100089365507
      G+C Difference (%)
      13.530000000000001
      0 references
      Alistipes shahii
      16S Identity %
      85.49668874172185
      POCPu
      16.110786034718156
      G+C Difference (%)
      14.420000000000002
      0 references
      Parabacteroides faecis
      16S Identity %
      85.40653231410703
      POCPu
      15.99885926137174
      G+C Difference (%)
      0.060000000000002274
      0 references
      Parabacteroides chinchillae
      16S Identity %
      85.31986531986531
      POCPu
      20.617308856163003
      G+C Difference (%)
      2.539999999999999
      0 references
      Bacteroides muris
      16S Identity %
      85.23401450230719
      POCPu
      17.925669835782195
      G+C Difference (%)
      3.0500000000000043
      0 references
      Bacteroides intestinalis
      16S Identity %
      85.22267206477733
      POCPu
      16.89483977734316
      G+C Difference (%)
      0.0899999999999963
      0 references
      Alistipes finegoldii
      16S Identity %
      85.18518518518519
      POCPu
      15.810889362526643
      G+C Difference (%)
      13.75
      0 references
      Bacteroides oleiciplenus
      16S Identity %
      85.13238289205702
      POCPu
      15.29175050301811
      G+C Difference (%)
      0.480000000000004
      0 references
      Alistipes indistinctus
      16S Identity %
      85.03034389750506
      POCPu
      18.905007019185774
      G+C Difference (%)
      11.86
      0 references
      Parabacteroides distasonis
      16S Identity %
      84.99669530733642
      POCPu
      18.15576534052596
      G+C Difference (%)
      2.1600000000000037
      0 references
      Breznakibacter xylanolyticus
      16S Identity %
      84.98338870431894
      POCPu
      16.32277081798084
      G+C Difference (%)
      3.509999999999998
      0 references
      Bacteroides nordii
      16S Identity %
      84.94694960212202
      POCPu
      17.183908045977013
      G+C Difference (%)
      2.299999999999997
      0 references
      Bacteroides stercoris
      16S Identity %
      84.82438701126573
      POCPu
      20.318352059925093
      G+C Difference (%)
      2.960000000000001
      0 references
      Labilibacter sediminis
      16S Identity %
      84.81432360742706
      POCPu
      13.23529411764706
      G+C Difference (%)
      7.019999999999996
      0 references
      Coprobacter secundus
      16S Identity %
      84.7926267281106
      POCPu
      20.42736718290531
      G+C Difference (%)
      5.079999999999998
      0 references
      Bacteroides helcogenes
      16S Identity %
      84.69184890656064
      POCPu
      20.17394592550577
      G+C Difference (%)
      1.8200000000000003
      0 references
      Bacteroides salyersiae
      16S Identity %
      84.69184890656064
      POCPu
      18.03818301514154
      G+C Difference (%)
      1.0499999999999972
      0 references
      Maribellus luteus
      16S Identity %
      83.92857142857143
      POCPu
      12.37250554323725
      G+C Difference (%)
      1.1700000000000017
      0 references
      Alistipes onderdonkii
      POCPu
      16.32572777340677
      G+C Difference (%)
      14.910000000000004
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH13
      Occurance
      4
      0 references
      GH6
      Occurance
      2
      0 references
      GH65
      Occurance
      2
      0 references
      GH77
      Occurance
      1
      0 references
      GH133
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH23
      Occurance
      3
      0 references
      GH57
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GT2
      Occurance
      27
      0 references
      GT13
      Occurance
      1
      0 references
      GT35
      Occurance
      1
      0 references
      GT51
      Occurance
      2
      0 references
      GT4
      Occurance
      18
      0 references
      GT22
      Occurance
      1
      0 references
      GT3
      Occurance
      1
      0 references
      GT28
      Occurance
      2
      0 references
      GT32
      Occurance
      2
      0 references
      GT61
      Occurance
      1
      0 references
      GT0
      Occurance
      2
      0 references
      GT19
      Occurance
      1
      0 references
      GT5
      Occurance
      1
      0 references
      PL0
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CE0
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      12
      0 references
      CBM20
      Occurance
      2
      0 references
      CBM13
      Occurance
      3
      0 references
      CBM5
      Occurance
      3
      0 references
      CBM6
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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