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‎Added qualifier: Prevalence (%) (P18): 7.6
 
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Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 18.8
Amount18.8
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.62
Amount0.62
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.28
Amount0.28
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 1.5
Amount1.5
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.8
Amount2.8
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 20:30, 15 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000153445.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Pseudomonas silesiensis
      16S Identity %
      25.223499361430395
      POCPu
      18.63361404341122
      G+C Difference (%)
      10.439999999999998
      0 references
      Pseudomonas idahonensis
      16S Identity %
      25.223499361430395
      POCPu
      17.66855256954267
      G+C Difference (%)
      12.979999999999997
      0 references
      Pseudomonas libanensis
      16S Identity %
      25.096774193548388
      POCPu
      18.47287511116758
      G+C Difference (%)
      11.04
      0 references
      Pseudomonas mucidolens
      16S Identity %
      25.064102564102562
      POCPu
      19.78553681182163
      G+C Difference (%)
      9.950000000000003
      0 references
      Pseudomonas synxantha
      16S Identity %
      24.98398462524023
      POCPu
      17.357117709189062
      G+C Difference (%)
      10.479999999999997
      0 references
      Pseudomonas shahriarae
      16S Identity %
      24.968071519795657
      POCPu
      19.351491569390404
      G+C Difference (%)
      11.450000000000003
      0 references
      Pseudomonas hormoni
      16S Identity %
      24.968071519795657
      POCPu
      18.408321238509917
      G+C Difference (%)
      9.939999999999998
      0 references
      Pseudomonas cedrina subsp. cedrina
      16S Identity %
      24.96774193548387
      0 references
      Pseudomonas gessardii
      16S Identity %
      24.96774193548387
      POCPu
      18.364594826529363
      G+C Difference (%)
      11.25
      0 references
      Pseudomonas lurida
      16S Identity %
      24.95201535508637
      POCPu
      18.742185546386597
      G+C Difference (%)
      11.469999999999999
      0 references
      Pseudomonas cedrina subsp. fulgida
      16S Identity %
      24.95201535508637
      0 references
      Pseudomonas cremoris
      16S Identity %
      24.904214559386972
      0 references
      Pseudomonas asgharzadehiana
      16S Identity %
      24.904214559386972
      POCPu
      19.0646562739586
      G+C Difference (%)
      11.450000000000003
      0 references
      Pseudomonas azadiae
      16S Identity %
      24.904214559386972
      POCPu
      18.977536793183578
      G+C Difference (%)
      11.549999999999997
      0 references
      Pseudomonas trivialis
      16S Identity %
      24.888035828534868
      POCPu
      19.769040417926863
      G+C Difference (%)
      11.839999999999996
      0 references
      Pseudomonas khavaziana
      16S Identity %
      24.840357598978287
      POCPu
      18.02453987730061
      G+C Difference (%)
      10.469999999999999
      0 references
      Pseudomonas poae
      16S Identity %
      24.824056301983365
      POCPu
      19.207762860560944
      G+C Difference (%)
      11.339999999999996
      0 references
      Pseudomonas punonensis
      16S Identity %
      24.792332268370608
      POCPu
      21.77181603773585
      G+C Difference (%)
      12.670000000000002
      0 references
      Pseudomonas tritici
      16S Identity %
      24.776500638569605
      POCPu
      18.623784592370978
      G+C Difference (%)
      10.729999999999997
      0 references
      Pseudomonas serboccidentalis
      16S Identity %
      24.759461193072482
      POCPu
      19.716662334286458
      G+C Difference (%)
      11.18
      0 references
      Pseudomonas pergaminensis
      16S Identity %
      24.71264367816092
      POCPu
      18.35328255350018
      G+C Difference (%)
      11.61
      0 references
      Pseudomonas salmasensis
      16S Identity %
      24.71264367816092
      POCPu
      18.819092209650147
      G+C Difference (%)
      11.149999999999999
      0 references
      Pseudomonas urmiensis
      16S Identity %
      24.71264367816092
      POCPu
      19.571045576407506
      G+C Difference (%)
      12.670000000000002
      0 references
      Pseudomonas prosekii
      16S Identity %
      24.648786717752238
      POCPu
      19.339440072248742
      G+C Difference (%)
      10.420000000000002
      0 references
      Pseudomonas khorasanensis
      16S Identity %
      24.648786717752238
      POCPu
      20.48601683410263
      G+C Difference (%)
      10.57
      0 references
      Pseudomonas tensinigenes
      16S Identity %
      24.648786717752238
      POCPu
      18.37606837606838
      G+C Difference (%)
      10.030000000000001
      0 references
      Pseudomonas triticicola
      16S Identity %
      24.648786717752238
      POCPu
      19.354404841963685
      G+C Difference (%)
      10.850000000000001
      0 references
      Pseudomonas reidholzensis
      16S Identity %
      24.632117722328857
      POCPu
      19.086229086229086
      G+C Difference (%)
      14.950000000000003
      0 references
      Pseudomonas allokribbensis
      16S Identity %
      24.584929757343552
      POCPu
      18.572636155053736
      G+C Difference (%)
      11.200000000000003
      0 references
      Pseudomonas azerbaijanoccidentalis
      16S Identity %
      24.584929757343552
      POCPu
      18.223691980630687
      G+C Difference (%)
      10.159999999999997
      0 references
      Pseudomonas iranensis
      16S Identity %
      24.584929757343552
      POCPu
      19.219373953368542
      G+C Difference (%)
      10.75
      0 references
      Pseudomonas germanica
      16S Identity %
      24.521072796934863
      0 references
      Pseudomonas gozinkensis
      16S Identity %
      24.521072796934863
      POCPu
      18.867924528301888
      G+C Difference (%)
      11.170000000000002
      0 references
      Pseudomonas atacamensis
      16S Identity %
      24.521072796934863
      POCPu
      19.25935417734495
      G+C Difference (%)
      10.740000000000002
      0 references
      Thalassolituus hydrocarboniclasticus
      16S Identity %
      24.470134874759154
      POCPu
      25.164445943666724
      G+C Difference (%)
      4.229999999999997
      0 references
      Pseudomonas zeae
      16S Identity %
      24.45721583652618
      0 references
      Pseudomonas fitomaticsae
      16S Identity %
      24.45721583652618
      POCPu
      19.069253438113947
      G+C Difference (%)
      11.450000000000003
      0 references
      Pseudomonas monsensis
      16S Identity %
      24.393358876117496
      POCPu
      19.16928886091882
      G+C Difference (%)
      10.909999999999997
      0 references
      Pseudomonas lactis
      16S Identity %
      24.32950191570881
      POCPu
      17.18433892657384
      G+C Difference (%)
      10.880000000000003
      0 references
      Pseudomonas paralactis
      16S Identity %
      24.26564495530013
      POCPu
      18.879478827361563
      G+C Difference (%)
      10.589999999999996
      0 references
      Pseudomonas rustica
      16S Identity %
      24.26564495530013
      POCPu
      19.262455865045116
      G+C Difference (%)
      9.769999999999996
      0 references
      Pseudomonas glycinae
      16S Identity %
      24.074074074074073
      POCPu
      19.15131906421105
      G+C Difference (%)
      11.339999999999996
      0 references
      Pseudomonas argentinensis
      16S Identity %
      23.87964148527529
      POCPu
      21.03448275862069
      G+C Difference (%)
      14.43
      0 references
      Porticoccus litoralis
      16S Identity %
      23.825065274151434
      POCPu
      45.53434276936581
      G+C Difference (%)
      3.9200000000000017
      0 references
      Microbulbifer flavimaris
      16S Identity %
      23.6048749198204
      POCPu
      32.535185523670265
      G+C Difference (%)
      10.740000000000002
      0 references
      Microbulbifer mangrovi
      16S Identity %
      23.544465770953295
      POCPu
      29.6474891918856
      G+C Difference (%)
      8.009999999999998
      0 references
      Saccharophagus degradans
      16S Identity %
      23.510570147341447
      POCPu
      25.493827160493826
      G+C Difference (%)
      3.3100000000000023
      0 references
      Microbulbifer taiwanensis
      16S Identity %
      23.38082901554404
      POCPu
      28.153046764289087
      G+C Difference (%)
      11.04
      0 references
      Pseudomonas danubii
      16S Identity %
      23.116219667943806
      0 references
      Marinimicrobium alkaliphilum
      16S Identity %
      22.673656618610746
      POCPu
      30.767837739949293
      G+C Difference (%)
      9.32
      0 references
      Pseudomonas cedrina
      POCPu
      18.4432749969404
      G+C Difference (%)
      11.57
      0 references
      CAZyme
      GH81
      Occurance
      1
      0 references
      GH149
      Occurance
      1
      0 references
      GH13
      Occurance
      3
      0 references
      GH3
      Occurance
      7
      0 references
      GH6
      Occurance
      2
      0 references
      GH16
      Occurance
      8
      0 references
      GH36
      Occurance
      1
      0 references
      GH23
      Occurance
      6
      0 references
      GH42
      Occurance
      1
      0 references
      GH28
      Occurance
      5
      0 references
      GH17
      Occurance
      4
      0 references
      GH101
      Occurance
      3
      0 references
      GH32
      Occurance
      2
      0 references
      GH10
      Occurance
      2
      0 references
      GH154
      Occurance
      1
      0 references
      GH33
      Occurance
      1
      0 references
      GH30
      Occurance
      1
      0 references
      GH71
      Occurance
      1
      0 references
      GH158
      Occurance
      1
      0 references
      GH135
      Occurance
      1
      0 references
      GH19
      Occurance
      2
      0 references
      GH103
      Occurance
      1
      0 references
      GH1
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH73
      Occurance
      1
      0 references
      GH114
      Occurance
      1
      0 references
      GT13
      Occurance
      2
      0 references
      GT51
      Occurance
      2
      0 references
      GT4
      Occurance
      14
      0 references
      GT90
      Occurance
      1
      0 references
      GT25
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT0
      Occurance
      3
      0 references
      GT1
      Occurance
      5
      0 references
      GT28
      Occurance
      5
      0 references
      GT2
      Occurance
      9
      0 references
      GT32
      Occurance
      1
      0 references
      GT30
      Occurance
      2
      0 references
      GT81
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT55
      Occurance
      1
      0 references
      GT26
      Occurance
      1
      0 references
      PL0
      Occurance
      1
      0 references
      CE6
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CE12
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM20
      Occurance
      2
      0 references
      CBM41
      Occurance
      2
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM4
      Occurance
      1
      0 references
      CBM50
      Occurance
      8
      0 references
      CBM51
      Occurance
      3
      0 references
      CBM9
      Occurance
      1
      0 references
      CBM85
      Occurance
      1
      0 references
      CBM6
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
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