GCA_002698305.1 (Q57660): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 25.82688247712878 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (177 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Lacticaseibacillus nasuensis / qualifier | |||||||
POCPu: 1.2323305545487495
| |||||||
| Property / Comparison to close relatives: Lacticaseibacillus nasuensis / qualifier | |||||||
G+C Difference (%): 19.619999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus hominis subsp. novobiosepticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus hominis subsp. novobiosepticus / qualifier | |||||||
16S Identity %: 25.551601423487547
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Amylolactobacillus amylotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Amylolactobacillus amylotrophicus / qualifier | |||||||
16S Identity %: 25.408719346049047
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Lactobacillus crispatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Lactobacillus crispatus / qualifier | |||||||
16S Identity %: 25.273224043715846
| |||||||
| Property / Comparison to close relatives: Lactobacillus crispatus / qualifier | |||||||
POCPu: 1.7235188509874326
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| Property / Comparison to close relatives: Lactobacillus crispatus / qualifier | |||||||
G+C Difference (%): 0.38000000000000256
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus hominis subsp. hominis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus hominis subsp. hominis / qualifier | |||||||
16S Identity %: 25.238095238095237
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus kloosii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus kloosii / qualifier | |||||||
16S Identity %: 25.22033898305085
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| Property / Comparison to close relatives: Staphylococcus kloosii / qualifier | |||||||
POCPu: 1.6321406151914626
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| Property / Comparison to close relatives: Staphylococcus kloosii / qualifier | |||||||
G+C Difference (%): 4.310000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus singaporensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus singaporensis / qualifier | |||||||
16S Identity %: 25.152542372881353
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus marylandisciuri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus marylandisciuri / qualifier | |||||||
16S Identity %: 24.862637362637365
| |||||||
| Property / Comparison to close relatives: Staphylococcus marylandisciuri / qualifier | |||||||
POCPu: 1.6992981159955671
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| Property / Comparison to close relatives: Staphylococcus marylandisciuri / qualifier | |||||||
G+C Difference (%): 0.8900000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus schweitzeri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus schweitzeri / qualifier | |||||||
16S Identity %: 24.739791833466775
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| Property / Comparison to close relatives: Staphylococcus schweitzeri / qualifier | |||||||
POCPu: 1.3650793650793651
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| Property / Comparison to close relatives: Staphylococcus schweitzeri / qualifier | |||||||
G+C Difference (%): 5.160000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus borealis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus borealis / qualifier | |||||||
16S Identity %: 24.287652645861602
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| Property / Comparison to close relatives: Staphylococcus borealis / qualifier | |||||||
POCPu: 1.6017587939698492
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| Property / Comparison to close relatives: Staphylococcus borealis / qualifier | |||||||
G+C Difference (%): 3.740000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus durrellii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus durrellii / qualifier | |||||||
16S Identity %: 24.219810040705564
| |||||||
| Property / Comparison to close relatives: Staphylococcus durrellii / qualifier | |||||||
POCPu: 1.4423076923076923
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| Property / Comparison to close relatives: Staphylococcus durrellii / qualifier | |||||||
G+C Difference (%): 4.710000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus lloydii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus lloydii / qualifier | |||||||
16S Identity %: 24.151967435549526
| |||||||
| Property / Comparison to close relatives: Staphylococcus lloydii / qualifier | |||||||
POCPu: 1.6087516087516087
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| Property / Comparison to close relatives: Staphylococcus lloydii / qualifier | |||||||
G+C Difference (%): 3.990000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Loriellopsis cavernicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Loriellopsis cavernicola / qualifier | |||||||
16S Identity %: 24.130737134909598
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Turicibacter bilis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Turicibacter bilis / qualifier | |||||||
16S Identity %: 24.125364431486883
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| Property / Comparison to close relatives: Turicibacter bilis / qualifier | |||||||
POCPu: 1.6777461221905667
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| Property / Comparison to close relatives: Turicibacter bilis / qualifier | |||||||
G+C Difference (%): 2.780000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Lentisphaera marina / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Lentisphaera marina / qualifier | |||||||
16S Identity %: 24.005582693649686
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| Property / Comparison to close relatives: Lentisphaera marina / qualifier | |||||||
POCPu: 0.6954387400286357
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| Property / Comparison to close relatives: Lentisphaera marina / qualifier | |||||||
G+C Difference (%): 3.0899999999999963
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Lentisphaera araneosa / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Lentisphaera araneosa / qualifier | |||||||
16S Identity %: 23.9945466939332
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| Property / Comparison to close relatives: Lentisphaera araneosa / qualifier | |||||||
POCPu: 0.8147745790331342
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| Property / Comparison to close relatives: Lentisphaera araneosa / qualifier | |||||||
G+C Difference (%): 3.5700000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Amylolactobacillus amylophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Amylolactobacillus amylophilus / qualifier | |||||||
16S Identity %: 23.980978260869566
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| Property / Comparison to close relatives: Amylolactobacillus amylophilus / qualifier | |||||||
POCPu: 1.831174631531934
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| Property / Comparison to close relatives: Amylolactobacillus amylophilus / qualifier | |||||||
G+C Difference (%): 6.269999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Gloeomargarita lithophora / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Gloeomargarita lithophora / qualifier | |||||||
16S Identity %: 23.858214042263125
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ligilactobacillus ubinensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ligilactobacillus ubinensis / qualifier | |||||||
16S Identity %: 23.727647867950484
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| Property / Comparison to close relatives: Ligilactobacillus ubinensis / qualifier | |||||||
POCPu: 1.6182298546895642
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| Property / Comparison to close relatives: Ligilactobacillus ubinensis / qualifier | |||||||
G+C Difference (%): 3.6300000000000026
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Mariniblastus fucicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Mariniblastus fucicola / qualifier | |||||||
16S Identity %: 23.53770260747005
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| Property / Comparison to close relatives: Mariniblastus fucicola / qualifier | |||||||
POCPu: 0.4859423811176675
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| Property / Comparison to close relatives: Mariniblastus fucicola / qualifier | |||||||
G+C Difference (%): 16.029999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Lentisphaera profundi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Lentisphaera profundi / qualifier | |||||||
16S Identity %: 23.467966573816156
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| Property / Comparison to close relatives: Lentisphaera profundi / qualifier | |||||||
POCPu: 0.7398520295940813
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| Property / Comparison to close relatives: Lentisphaera profundi / qualifier | |||||||
G+C Difference (%): 3.1699999999999946
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sporacetigenium mesophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sporacetigenium mesophilum / qualifier | |||||||
16S Identity %: 23.408624229979466
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pantanalinema rosaneae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pantanalinema rosaneae / qualifier | |||||||
16S Identity %: 22.5984796129924
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Clostridium aestuarii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Clostridium aestuarii / qualifier | |||||||
16S Identity %: 22.15949188426253
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| Property / Comparison to close relatives: Clostridium aestuarii / qualifier | |||||||
POCPu: 1.3748378728923476
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| Property / Comparison to close relatives: Clostridium aestuarii / qualifier | |||||||
G+C Difference (%): 9.090000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus petrasii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus petrasii / qualifier | |||||||
POCPu: 1.5282392026578073
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| Property / Comparison to close relatives: Staphylococcus petrasii / qualifier | |||||||
G+C Difference (%): 4.050000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus aureus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus aureus / qualifier | |||||||
POCPu: 1.365512861225786
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| Property / Comparison to close relatives: Staphylococcus aureus / qualifier | |||||||
G+C Difference (%): 4.539999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus capitis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus capitis / qualifier | |||||||
POCPu: 1.5599070693660804
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| Property / Comparison to close relatives: Staphylococcus capitis / qualifier | |||||||
G+C Difference (%): 4.539999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus hominis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus hominis / qualifier | |||||||
POCPu: 1.8424855491329482
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| Property / Comparison to close relatives: Staphylococcus hominis / qualifier | |||||||
G+C Difference (%): 6.010000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus equorum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus equorum / qualifier | |||||||
POCPu: 1.4985950671245707
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| Property / Comparison to close relatives: Staphylococcus equorum / qualifier | |||||||
G+C Difference (%): 4.300000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Staphylococcus cohnii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Staphylococcus cohnii / qualifier | |||||||
POCPu: 1.5047021943573669
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| Property / Comparison to close relatives: Staphylococcus cohnii / qualifier | |||||||
G+C Difference (%): 5.160000000000004
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.4
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 23:35, 24 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_002698305.1 |
genome assembly |
Statements
no current description - please contribute here
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