GCA_002688095.1 (Q57295): Difference between revisions
Appearance
Created claim: Protologue of the species (P20): no current description - please contribute here |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
||||||
| (122 intermediate revisions by the same user not shown) | |||||||
| Property / Instance of | |||||||
| Property / Instance of: Genome Assembly Accession / rank | |||||||
Normal rank | |||||||
| Property / GTDB | |||||||
| Property / GTDB: Archaea / rank | |||||||
Normal rank | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter millerae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier | |||||||
16S Identity %: 25.594294770206023
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier | |||||||
POCPu: 1.1246786632390746
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier | |||||||
G+C Difference (%): 4.410000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter thaueri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier | |||||||
16S Identity %: 25.137903861308114
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier | |||||||
POCPu: 1.387443635102324
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier | |||||||
G+C Difference (%): 4.859999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
16S Identity %: 24.69304229195089
| |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
POCPu: 2.2425249169435215
| |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
G+C Difference (%): 2.729999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
16S Identity %: 24.054982817869416
| |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
POCPu: 2.181967888019761
| |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
G+C Difference (%): 0.8800000000000026
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcoides alaskense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcoides alaskense / qualifier | |||||||
16S Identity %: 23.830409356725145
| |||||||
| Property / Comparison to close relatives: Methanococcoides alaskense / qualifier | |||||||
POCPu: 1.5674984005118364
| |||||||
| Property / Comparison to close relatives: Methanococcoides alaskense / qualifier | |||||||
G+C Difference (%): 9.68
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
16S Identity %: 23.812849162011172
| |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
POCPu: 1.4146494812951902
| |||||||
| Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier | |||||||
G+C Difference (%): 7.390000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
16S Identity %: 23.718386876281613
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
POCPu: 1.6250495441934205
| |||||||
| Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier | |||||||
G+C Difference (%): 0.9799999999999969
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 23.328785811732605
| |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 1.5873015873015872
| |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 1.9699999999999989
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcoides burtonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcoides burtonii / qualifier | |||||||
16S Identity %: 23.171565276828435
| |||||||
| Property / Comparison to close relatives: Methanococcoides burtonii / qualifier | |||||||
POCPu: 1.5485407980941037
| |||||||
| Property / Comparison to close relatives: Methanococcoides burtonii / qualifier | |||||||
G+C Difference (%): 8.75
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 2.4
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 21:50, 24 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_002688095.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references
0 references