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GCA_002688035.1 (Q57292): Difference between revisions

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Created claim: Protologue of the species (P20): no current description - please contribute here
 
(164 intermediate revisions by the same user not shown)
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
16S Identity %: 76.58495350803042
Amount76.58495350803042
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
POCPu: 2.5762711864406778
Amount2.5762711864406778
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
G+C Difference (%): 4.93
Amount4.93
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
16S Identity %: 76.51677373304783
Amount76.51677373304783
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
POCPu: 2.5516795865633073
Amount2.5516795865633073
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
G+C Difference (%): 7.880000000000003
Amount7.880000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movens / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movens / qualifier
 
16S Identity %: 76.26050420168067
Amount76.26050420168067
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter acididurans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier
 
16S Identity %: 76.23318385650224
Amount76.23318385650224
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
16S Identity %: 76.19808306709265
Amount76.19808306709265
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
POCPu: 2.6267785479751913
Amount2.6267785479751913
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
G+C Difference (%): 15.84
Amount15.84
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter olleyae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
16S Identity %: 76.15629984051037
Amount76.15629984051037
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
POCPu: 2.4390243902439024
Amount2.4390243902439024
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
G+C Difference (%): 14.48
Amount14.48
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus aeolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
16S Identity %: 76.03305785123968
Amount76.03305785123968
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
POCPu: 2.71786022433132
Amount2.71786022433132
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
G+C Difference (%): 11.240000000000002
Amount11.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank
 
Normal rank
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
16S Identity %: 75.80314422419686
Amount75.80314422419686
Unit1
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
POCPu: 3.1219512195121952
Amount3.1219512195121952
Unit1
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
G+C Difference (%): 6.030000000000001
Amount6.030000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter cuticularis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
16S Identity %: 75.44128933231006
Amount75.44128933231006
Unit1
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
POCPu: 2.1693491952414274
Amount2.1693491952414274
Unit1
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
G+C Difference (%): 14.490000000000002
Amount14.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
16S Identity %: 75.08771929824562
Amount75.08771929824562
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
POCPu: 2.2058823529411766
Amount2.2058823529411766
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
G+C Difference (%): 8.64
Amount8.64
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus vannielii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
16S Identity %: 75.05168849069607
Amount75.05168849069607
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
POCPu: 2.0086648286727056
Amount2.0086648286727056
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
G+C Difference (%): 9.950000000000003
Amount9.950000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Archaeoglobus infectus / rank
 
Normal rank
Property / Comparison to close relatives: Archaeoglobus infectus / qualifier
 
16S Identity %: 74.67811158798283
Amount74.67811158798283
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Archaeoglobus fulgidus / rank
 
Normal rank
Property / Comparison to close relatives: Archaeoglobus fulgidus / qualifier
 
16S Identity %: 74.4186046511628
Amount74.4186046511628
Unit1
Property / Comparison to close relatives: Archaeoglobus fulgidus / qualifier
 
POCPu: 2.3557837511325883
Amount2.3557837511325883
Unit1
Property / Comparison to close relatives: Archaeoglobus fulgidus / qualifier
 
G+C Difference (%): 7.299999999999997
Amount7.299999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus voltae / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus voltae / qualifier
 
16S Identity %: 73.74224672639559
Amount73.74224672639559
Unit1
Property / Comparison to close relatives: Methanococcus voltae / qualifier
 
POCPu: 2.454242928452579
Amount2.454242928452579
Unit1
Property / Comparison to close relatives: Methanococcus voltae / qualifier
 
G+C Difference (%): 12.290000000000003
Amount12.290000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Microcaldus variisymbioticus / rank
 
Normal rank
Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier
 
16S Identity %: 70.87087087087087
Amount70.87087087087087
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GH130 / rank
 
Normal rank
Property / CAZyme: GH130 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH109 / rank
 
Normal rank
Property / CAZyme: GH109 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 20
Amount20
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 9
Amount9
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT81 / rank
 
Normal rank
Property / CAZyme: GT81 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM2 / rank
 
Normal rank
Property / CAZyme: CBM2 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 1.4
Amount1.4
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 21:48, 24 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_002688035.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      0 references
      76.51677373304783
      2.5516795865633073
      7.880000000000003
      0 references
      0 references
      0 references
      76.19808306709265
      2.6267785479751913
      0 references
      76.15629984051037
      2.4390243902439024
      0 references
      76.03305785123968
      2.71786022433132
      11.240000000000002
      0 references
      75.80314422419686
      3.1219512195121952
      6.030000000000001
      0 references
      75.44128933231006
      2.1693491952414274
      14.490000000000002
      0 references
      75.08771929824562
      2.2058823529411766
      0 references
      75.05168849069607
      2.0086648286727056
      9.950000000000003
      0 references
      0 references
      74.4186046511628
      2.3557837511325883
      7.299999999999997
      0 references
      73.74224672639559
      2.454242928452579
      12.290000000000003
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
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