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Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / rank
 
Normal rank
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: C1-unit interconversion, prokaryotes / rank
 
Normal rank
Property / Pathway: C1-unit interconversion, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation II / rank
 
Normal rank
Property / Pathway: Methionine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate consumption I / rank
 
Normal rank
Property / Pathway: Lactate consumption I / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 2
Amount2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.41
Amount0.41
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 2.8
Amount2.8
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.24
Amount0.24
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 1.4
Amount1.4
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.12
Amount0.12
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.22
Amount0.22
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 1.4
Amount1.4
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 22:01, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_038850735.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanomassiliicoccus luminyensis
      16S Identity %
      92.94199860237596
      POCPu
      38.5
      G+C Difference (%)
      16.729999999999997
      0 references
      Methanomethylophilus alvi
      16S Identity %
      86.5141955835962
      POCPu
      21.920345785736338
      G+C Difference (%)
      11.840000000000003
      0 references
      Methanothrix harundinacea
      16S Identity %
      80.34251675353686
      POCPu
      10.161490683229815
      G+C Difference (%)
      11.75
      0 references
      Thermogymnomonas acidicola
      16S Identity %
      80.05843681519357
      POCPu
      8.29369183040331
      G+C Difference (%)
      12.68
      0 references
      Methanococcoides burtonii
      16S Identity %
      80.02726653033402
      POCPu
      8.250355618776672
      G+C Difference (%)
      2.990000000000002
      0 references
      Thermoplasma volcanium
      16S Identity %
      79.89093387866394
      POCPu
      7.837087318728788
      G+C Difference (%)
      3.8299999999999983
      0 references
      Methanococcoides methylutens
      16S Identity %
      79.76680384087793
      POCPu
      8.665681930083704
      G+C Difference (%)
      1.25
      0 references
      Methanococcoides orientis
      16S Identity %
      79.75460122699386
      POCPu
      9.212518929833417
      G+C Difference (%)
      1.0700000000000003
      0 references
      Methanococcoides alaskense
      16S Identity %
      79.55882352941175
      POCPu
      8.75564475664827
      G+C Difference (%)
      2.0600000000000023
      0 references
      Methanotorris igneus
      16S Identity %
      79.49591280653951
      POCPu
      10.686131386861314
      G+C Difference (%)
      11.450000000000003
      0 references
      Methermicoccus shengliensis
      16S Identity %
      79.43156320119671
      POCPu
      11.546840958605664
      G+C Difference (%)
      10.82
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      79.40360610263522
      POCPu
      9.10377358490566
      G+C Difference (%)
      1.8800000000000026
      0 references
      Methanolobus zinderi
      16S Identity %
      79.39972714870396
      POCPu
      8.775222900046927
      G+C Difference (%)
      0.3100000000000023
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      79.34560327198365
      POCPu
      5.7535784451305085
      G+C Difference (%)
      6.450000000000003
      0 references
      Thermococcus eurythermalis
      16S Identity %
      79.291553133515
      POCPu
      7.908294693456981
      G+C Difference (%)
      9.700000000000003
      0 references
      Thermoplasma acidophilum
      16S Identity %
      79.27743694614861
      POCPu
      8.257169870784747
      G+C Difference (%)
      2.240000000000002
      0 references
      Thermococcus henrietii
      16S Identity %
      79.22343324250681
      POCPu
      7.9756159512319025
      G+C Difference (%)
      10.829999999999998
      0 references
      Methanotorris formicicus
      16S Identity %
      79.15531335149863
      POCPu
      9.963513892786978
      G+C Difference (%)
      11.310000000000002
      0 references
      Thermococcus piezophilus
      16S Identity %
      79.15531335149863
      POCPu
      8.135330578512397
      G+C Difference (%)
      7.359999999999999
      0 references
      Thermococcus cleftensis
      16S Identity %
      79.15531335149863
      POCPu
      8.213217296709274
      G+C Difference (%)
      12.07
      0 references
      Methanolobus mangrovi
      16S Identity %
      79.15531335149863
      POCPu
      9.172749391727494
      G+C Difference (%)
      2.1400000000000006
      0 references
      Thermococcus pacificus
      16S Identity %
      79.1107974594213
      POCPu
      8.4740990990991
      G+C Difference (%)
      10.490000000000002
      0 references
      Thermococcus kodakarensis
      16S Identity %
      79.08719346049047
      POCPu
      8.018386108273749
      G+C Difference (%)
      8.25
      0 references
      Thermococcus gammatolerans
      16S Identity %
      79.07293796864349
      POCPu
      8.44585649986762
      G+C Difference (%)
      9.810000000000002
      0 references
      Thermococcus litoralis
      16S Identity %
      79.01907356948229
      POCPu
      7.682926829268292
      G+C Difference (%)
      0.6599999999999966
      0 references
      Methanocaldococcus fervens
      16S Identity %
      79.01572112098428
      POCPu
      10.792476102374344
      G+C Difference (%)
      11.530000000000001
      0 references
      Methanolobus profundi
      16S Identity %
      78.95490336435218
      POCPu
      8.265012187015289
      G+C Difference (%)
      1.1799999999999997
      0 references
      Methanolinea tarda
      16S Identity %
      78.95104895104895
      POCPu
      8.13081308130813
      G+C Difference (%)
      11.079999999999998
      0 references
      Thermococcus zilligii
      16S Identity %
      78.90034364261169
      POCPu
      8.56401384083045
      G+C Difference (%)
      10.729999999999997
      0 references
      Methanocaldococcus bathoardescens
      16S Identity %
      78.88283378746594
      POCPu
      10.551997560231777
      G+C Difference (%)
      12.96
      0 references
      Thermococcus coalescens
      16S Identity %
      78.88283378746594
      0 references
      Methanolobus sediminis
      16S Identity %
      78.88283378746594
      POCPu
      8.830382106244175
      G+C Difference (%)
      2.8100000000000023
      0 references
      Thermococcus thermotolerans
      16S Identity %
      78.87901572112098
      POCPu
      7.959814528593509
      G+C Difference (%)
      9.740000000000002
      0 references
      Methanocaldococcus jannaschii
      16S Identity %
      78.86843899113838
      POCPu
      9.798850574712644
      G+C Difference (%)
      12.46
      0 references
      Methanohalophilus mahii
      16S Identity %
      78.81471389645776
      POCPu
      9.822910902047592
      G+C Difference (%)
      1.1300000000000026
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      78.78581173260572
      POCPu
      12.305889246996777
      G+C Difference (%)
      9.799999999999997
      0 references
      Methanosalsum zhilinae
      16S Identity %
      78.75793930839802
      POCPu
      10.550964187327825
      G+C Difference (%)
      4.590000000000003
      0 references
      Methanocaldococcus infernus
      16S Identity %
      78.74231032125769
      POCPu
      10.367240818979525
      G+C Difference (%)
      10.130000000000003
      0 references
      Thermococcus waiotapuensis
      16S Identity %
      78.73684210526316
      0 references
      Methanothrix soehngenii
      16S Identity %
      78.66394001363327
      POCPu
      8.535798752956353
      G+C Difference (%)
      7.240000000000002
      0 references
      Methanothermobacter thermautotrophicus
      16S Identity %
      78.52760736196319
      POCPu
      10.52026444380569
      G+C Difference (%)
      5.789999999999999
      0 references
      Thermococcus celericrescens
      16S Identity %
      78.4741144414169
      POCPu
      7.337021890786626
      G+C Difference (%)
      10.54
      0 references
      Thermococcus camini
      16S Identity %
      78.4741144414169
      POCPu
      7.997881355932203
      G+C Difference (%)
      10.880000000000003
      0 references
      Methanolobus psychrotolerans
      16S Identity %
      78.4692417739628
      POCPu
      8.29513206723423
      G+C Difference (%)
      2.4200000000000017
      0 references
      Methanolobus oregonensis
      16S Identity %
      78.42998585572843
      0 references
      Methanolobus bombayensis
      16S Identity %
      78.33219412166781
      POCPu
      8.28111011638317
      G+C Difference (%)
      4.030000000000001
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      78.21305841924399
      POCPu
      9.425357251444208
      G+C Difference (%)
      10.86
      0 references
      Picrophilus torridus
      16S Identity %
      77.96842827728209
      0 references
      Methanothermococcus okinawensis
      16S Identity %
      77.9291553133515
      POCPu
      8.87392900856793
      G+C Difference (%)
      14.469999999999999
      0 references
      Picrophilus oshimae
      16S Identity %
      77.84594410361282
      POCPu
      7.463154593916588
      G+C Difference (%)
      7.770000000000003
      0 references
      CAZyme
      GH109
      Occurance
      1
      0 references
      GH19
      Occurance
      2
      0 references
      GH43
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT4
      Occurance
      11
      0 references
      GT2
      Occurance
      14
      0 references
      GT21
      Occurance
      1
      0 references
      GT0
      Occurance
      1
      0 references
      CE9
      Occurance
      1
      0 references
      CE4
      Occurance
      2
      0 references
      CBM50
      Occurance
      4
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      Pathway
      MAGs
      no MAG matches found
      0 references
       
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