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GCA_038740145.1 (Q335410): Difference between revisions

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Property / Protologue of the species
 
no current description - please contribute here
Property / Protologue of the species: no current description - please contribute here / rank
 
Normal rank
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus indicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus indicus / qualifier
 
16S Identity %: 73.30960854092527
Amount73.30960854092527
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / qualifier
 
16S Identity %: 72.3463687150838
Amount72.3463687150838
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus taiwanensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
16S Identity %: 71.99434229137199
Amount71.99434229137199
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
POCPu: 2.3542922767728967
Amount2.3542922767728967
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
G+C Difference (%): 8.079999999999998
Amount8.079999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 71.20383036935705
Amount71.20383036935705
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 2.1839563208735826
Amount2.1839563208735826
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 5.899999999999999
Amount5.899999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma volcanium / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
16S Identity %: 70.9501025290499
Amount70.9501025290499
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
POCPu: 2.08248264597795
Amount2.08248264597795
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
G+C Difference (%): 11.969999999999999
Amount11.969999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylophilus alvi / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
16S Identity %: 68.90292028413575
Amount68.90292028413575
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
POCPu: 2.206783816918676
Amount2.206783816918676
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
G+C Difference (%): 3.700000000000003
Amount3.700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Tellurimicrobium multivorans / rank
 
Normal rank
Property / Comparison to close relatives: Tellurimicrobium multivorans / qualifier
 
16S Identity %: 65.27777777777779
Amount65.27777777777779
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Orenia marismortui / rank
 
Normal rank
Property / Comparison to close relatives: Orenia marismortui / qualifier
 
16S Identity %: 64.52268111035883
Amount64.52268111035883
Unit1
Property / Comparison to close relatives: Orenia marismortui / qualifier
 
POCPu: 0.3500875218804701
Amount0.3500875218804701
Unit1
Property / Comparison to close relatives: Orenia marismortui / qualifier
 
G+C Difference (%): 21.22
Amount21.22
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Orenia chitinitropha / rank
 
Normal rank
Property / Comparison to close relatives: Orenia chitinitropha / qualifier
 
16S Identity %: 63.81944444444444
Amount63.81944444444444
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Orenia salinaria / rank
 
Normal rank
Property / Comparison to close relatives: Orenia salinaria / qualifier
 
16S Identity %: 62.9601226993865
Amount62.9601226993865
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Orenia sivashensis / rank
 
Normal rank
Property / Comparison to close relatives: Orenia sivashensis / qualifier
 
16S Identity %: 62.12338593974175
Amount62.12338593974175
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Aequorivita xiaoshiensis / rank
 
Normal rank
Property / Comparison to close relatives: Aequorivita xiaoshiensis / qualifier
 
16S Identity %: 61.59567275185937
Amount61.59567275185937
Unit1
Property / Comparison to close relatives: Aequorivita xiaoshiensis / qualifier
 
POCPu: 0.19428254232583958
Amount0.19428254232583958
Unit1
Property / Comparison to close relatives: Aequorivita xiaoshiensis / qualifier
 
G+C Difference (%): 17.36
Amount17.36
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank
 
Normal rank
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 21:36, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_038740145.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      0 references
      0 references
      71.99434229137199
      2.3542922767728967
      8.079999999999998
      0 references
      71.20383036935705
      2.1839563208735826
      5.899999999999999
      0 references
      70.9501025290499
      2.08248264597795
      11.969999999999999
      0 references
      68.90292028413575
      2.206783816918676
      3.700000000000003
      0 references
      0 references
      64.52268111035883
      0.3500875218804701
      0 references
      0 references
      62.9601226993865
      0 references
      0 references
      61.59567275185937
      0.19428254232583958
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references