Jump to content

GCA_038727515.1 (Q335352): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
5,472,969 edits
‎Changed an Item
‎Changed an Item
 
(3 intermediate revisions by the same user not shown)
Property / CAZyme
 
Property / CAZyme: GH38 / rank
 
Normal rank
Property / CAZyme: GH38 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH20 / rank
 
Normal rank
Property / CAZyme: GH20 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GH3 / rank
 
Normal rank
Property / CAZyme: GH3 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH4 / rank
 
Normal rank
Property / CAZyme: GH4 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH105 / rank
 
Normal rank
Property / CAZyme: GH105 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 13
Amount13
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 12
Amount12
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE9 / rank
 
Normal rank
Property / CAZyme: CE9 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM57 / rank
 
Normal rank
Property / CAZyme: CBM57 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank
 
Normal rank
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation I / rank
 
Normal rank
Property / Pathway: Methionine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation V / rank
 
Normal rank
Property / Pathway: Arginine degradation V / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Hydrogen metabolism / rank
 
Normal rank
Property / Pathway: Hydrogen metabolism / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 3300000866_12.fna / rank
 
Normal rank
Property / MAGs: 3300000866_12.fna / qualifier
 

Latest revision as of 21:24, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_038727515.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Thermofilum adornatum
      16S Identity %
      85.2448021462106
      POCPu
      10.42021578648495
      G+C Difference (%)
      13.619999999999997
      0 references
      Thermofilum uzonense
      16S Identity %
      84.89304812834224
      POCPu
      9.8621103117506
      G+C Difference (%)
      15.049999999999997
      0 references
      Aeropyrum camini
      16S Identity %
      84.8463687150838
      POCPu
      6.900763358778626
      G+C Difference (%)
      23.839999999999996
      0 references
      Thermofilum pendens
      16S Identity %
      84.73895582329317
      POCPu
      10.582306830907056
      G+C Difference (%)
      24.759999999999998
      0 references
      Thermogladius calderae
      16S Identity %
      84.71849865951742
      POCPu
      10.352710646636186
      G+C Difference (%)
      22.75
      0 references
      Aeropyrum pernix
      16S Identity %
      84.55625436757512
      POCPu
      6.69842214944924
      G+C Difference (%)
      23.42
      0 references
      Pyrofollis japonicus
      16S Identity %
      84.52220726783311
      POCPu
      9.100729138536321
      G+C Difference (%)
      16.47
      0 references
      Hyperthermus butylicus
      16S Identity %
      84.32267884322678
      POCPu
      9.743441914096282
      G+C Difference (%)
      20.85
      0 references
      Pyrodictium brockii
      16S Identity %
      84.23423423423422
      0 references
      Pyrodictium delaneyi
      16S Identity %
      84.1823056300268
      POCPu
      9.047237790232186
      G+C Difference (%)
      21.019999999999996
      0 references
      Pyrolobus fumarii
      16S Identity %
      84.1374269005848
      POCPu
      8.186021212945334
      G+C Difference (%)
      22.009999999999998
      0 references
      Staphylothermus hellenicus
      16S Identity %
      84.08026755852843
      POCPu
      10.769698813507759
      G+C Difference (%)
      3.950000000000003
      0 references
      Desulfurococcus mucosus
      16S Identity %
      84.03755868544602
      POCPu
      10.262371305214215
      G+C Difference (%)
      20.25
      0 references
      Thermosphaera aggregans
      16S Identity %
      83.98123324396782
      POCPu
      9.914921465968586
      G+C Difference (%)
      13.839999999999996
      0 references
      Pyrodictium occultum
      16S Identity %
      83.95973154362416
      POCPu
      9.452137266706803
      G+C Difference (%)
      30.61
      0 references
      Ignicoccus hospitalis
      16S Identity %
      83.88458831808585
      POCPu
      7.699680511182108
      G+C Difference (%)
      23.630000000000003
      0 references
      Ignisphaera aggregans
      16S Identity %
      83.86440677966101
      POCPu
      9.45054945054945
      G+C Difference (%)
      2.799999999999997
      0 references
      Ignicoccus pacificus
      16S Identity %
      83.7593984962406
      POCPu
      7.724837891175642
      G+C Difference (%)
      15.29
      0 references
      Vulcanisaeta distributa
      16S Identity %
      83.54515050167224
      POCPu
      6.649251959154595
      G+C Difference (%)
      12.54
      0 references
      Fervidicoccus fontis
      16S Identity %
      83.47826086956522
      POCPu
      9.482470784641068
      G+C Difference (%)
      4.579999999999998
      0 references
      Desulfurococcus amylolyticus
      16S Identity %
      83.24324324324324
      POCPu
      10.912698412698413
      G+C Difference (%)
      12.269999999999996
      0 references
      Vulcanisaeta thermophila
      16S Identity %
      83.24061196105703
      POCPu
      7.245996324494618
      G+C Difference (%)
      16.189999999999998
      0 references
      Sulfurisphaera tokodaii
      16S Identity %
      83.05312710154674
      POCPu
      6.564786913473957
      G+C Difference (%)
      0.10000000000000142
      0 references
      Thermocladium modestius
      16S Identity %
      83.04735758407688
      POCPu
      5.663716814159292
      G+C Difference (%)
      20.25
      0 references
      Sulfurisphaera ohwakuensis
      16S Identity %
      83.04172274562585
      POCPu
      6.614038830808619
      G+C Difference (%)
      0.14000000000000057
      0 references
      Acidilobus saccharovorans
      16S Identity %
      82.75167785234899
      POCPu
      7.569974554707379
      G+C Difference (%)
      24.33
      0 references
      Sulfophobococcus zilligii
      16S Identity %
      82.73972602739727
      0 references
      Vulcanisaeta souniana
      16S Identity %
      82.67123287671232
      POCPu
      6.3790303873811185
      G+C Difference (%)
      12.240000000000002
      0 references
      Caldivirga maquilingensis
      16S Identity %
      82.53424657534246
      POCPu
      6.239913932221625
      G+C Difference (%)
      10.21
      0 references
      Saccharolobus caldissimus
      16S Identity %
      82.46445497630332
      POCPu
      6.112568085535607
      G+C Difference (%)
      0.00999999999999801
      0 references
      Sulfurisphaera javensis
      16S Identity %
      82.44067796610169
      POCPu
      6.568848758465011
      G+C Difference (%)
      1.2100000000000009
      0 references
      Thermoproteus tenax
      16S Identity %
      82.36083165660631
      POCPu
      7.075850978290004
      G+C Difference (%)
      22.240000000000002
      0 references
      Stygiolobus caldivivus
      16S Identity %
      82.2972972972973
      POCPu
      6.126397248495271
      G+C Difference (%)
      7.25
      0 references
      Sulfolobus yangmingensis
      16S Identity %
      82.24613315400134
      0 references
      Pyrobaculum igneiluti
      16S Identity %
      82.20735785953177
      0 references
      Pyrobaculum ferrireducens
      16S Identity %
      82.11654387139986
      POCPu
      5.534308211473566
      G+C Difference (%)
      24.08
      0 references
      Sulfolobus acidocaldarius
      16S Identity %
      82.11163416274377
      POCPu
      5.7057057057057055
      G+C Difference (%)
      3.8200000000000003
      0 references
      Thermoproteus thermophilus
      16S Identity %
      81.99581297976273
      0 references
      Pyrobaculum calidifontis
      16S Identity %
      81.92771084337349
      POCPu
      6.281790437436419
      G+C Difference (%)
      24.259999999999998
      0 references
      Saccharolobus shibatae
      16S Identity %
      81.92204301075269
      POCPu
      5.5971702039117766
      G+C Difference (%)
      2.469999999999999
      0 references
      Caldisphaera lagunensis
      16S Identity %
      81.91780821917808
      POCPu
      7.075173720783323
      G+C Difference (%)
      2.8599999999999994
      0 references
      Ignicoccus islandicus
      16S Identity %
      81.91780821917808
      POCPu
      7.9120879120879115
      G+C Difference (%)
      12.009999999999998
      0 references
      Pyrobaculum neutrophilum
      16S Identity %
      81.90348525469169
      POCPu
      6.256771397616467
      G+C Difference (%)
      27.019999999999996
      0 references
      Acidianus infernus
      16S Identity %
      81.7433081674674
      POCPu
      6.785889269965703
      G+C Difference (%)
      1.4699999999999989
      0 references
      Sulfodiicoccus acidiphilus
      16S Identity %
      81.6340782122905
      POCPu
      5.170777988614801
      G+C Difference (%)
      18.259999999999998
      0 references
      Saccharolobus solfataricus
      16S Identity %
      81.58602150537635
      POCPu
      5.619335347432024
      G+C Difference (%)
      2.950000000000003
      0 references
      Pyrobaculum oguniense
      16S Identity %
      81.52692569870484
      POCPu
      5.389482871481563
      G+C Difference (%)
      22.159999999999997
      0 references
      Pyrobaculum organotrophum
      16S Identity %
      81.51791988756149
      0 references
      Conexivisphaera calida
      16S Identity %
      81.17883456128601
      POCPu
      5.929339477726574
      G+C Difference (%)
      29.18
      0 references
      Pyrobaculum islandicum
      16S Identity %
      80.7351940095303
      POCPu
      6.418653392716793
      G+C Difference (%)
      16.71
      0 references
      CAZyme
      GH38
      Occurance
      1
      0 references
      GH20
      Occurance
      6
      0 references
      GH3
      Occurance
      1
      0 references
      GH4
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT4
      Occurance
      13
      0 references
      GT2
      Occurance
      12
      0 references
      GT0
      Occurance
      1
      0 references
      CE9
      Occurance
      2
      0 references
      CE4
      Occurance
      2
      0 references
      CBM50
      Occurance
      4
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM57
      Occurance
      1
      0 references
      Pathway
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q335352&oldid=5480571"