Jump to content

GCA_036815945.1 (Q327341): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
5,472,969 edits
‎Changed an Item
‎Changed an Item
 
(2 intermediate revisions by the same user not shown)
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank
 
Normal rank
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / rank
 
Normal rank
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: Sulfur reduction, sulfur => sulfide / rank
 
Normal rank
Property / Pathway: Sulfur reduction, sulfur => sulfide / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Formate conversion / rank
 
Normal rank
Property / Pathway: Formate conversion / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.9
Amount1.9
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 3.9
Amount3.9
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 14.8
Amount14.8
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 2.88
Amount2.88
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 2.2
Amount2.2
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 10.1
Amount10.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.11
Amount0.11
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.45
Amount0.45
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 3300013764_3.fna / rank
 
Normal rank
Property / MAGs: 3300013764_3.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300014823_4.fna / rank
 
Normal rank
Property / MAGs: 3300014823_4.fna / qualifier
 

Latest revision as of 18:22, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_036815945.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Ignicoccus islandicus
      16S Identity %
      29.647546648237732
      POCPu
      1.954152574220218
      G+C Difference (%)
      5.899999999999999
      0 references
      Vulcanisaeta thermophila
      16S Identity %
      29.251224632610217
      POCPu
      1.9340733266061216
      G+C Difference (%)
      10.079999999999998
      0 references
      Aeropyrum pernix
      16S Identity %
      27.485795454545453
      POCPu
      1.9832605531295486
      G+C Difference (%)
      17.310000000000002
      0 references
      Ignisphaera aggregans
      16S Identity %
      27.241379310344826
      POCPu
      1.6790721827938375
      G+C Difference (%)
      3.3100000000000023
      0 references
      Aeropyrum camini
      16S Identity %
      27.18239886444287
      POCPu
      1.9216555801921658
      G+C Difference (%)
      17.729999999999997
      0 references
      Conexivisphaera calida
      16S Identity %
      26.875852660300136
      POCPu
      4.821958456973293
      G+C Difference (%)
      23.07
      0 references
      Methanocaldococcus jannaschii
      16S Identity %
      26.757679180887372
      POCPu
      1.9274977895667549
      G+C Difference (%)
      7.710000000000001
      0 references
      Thermofilum pendens
      16S Identity %
      26.5892002734108
      POCPu
      1.85671746365388
      G+C Difference (%)
      18.65
      0 references
      Pyrolobus fumarii
      16S Identity %
      26.514032496307237
      POCPu
      2.063983488132095
      G+C Difference (%)
      15.899999999999999
      0 references
      Pyrodictium occultum
      16S Identity %
      26.38414217361586
      POCPu
      2.069976186114673
      G+C Difference (%)
      24.5
      0 references
      Pyrodictium delaneyi
      16S Identity %
      26.229508196721312
      POCPu
      1.9714479945615229
      G+C Difference (%)
      14.909999999999997
      0 references
      Saccharolobus caldissimus
      16S Identity %
      26.196990424076606
      POCPu
      2.255427121511136
      G+C Difference (%)
      6.100000000000001
      0 references
      Thermofilum adornatum
      16S Identity %
      25.938566552901023
      POCPu
      1.8377805265948048
      G+C Difference (%)
      7.509999999999998
      0 references
      Methanothermus fervidus
      16S Identity %
      25.885558583106267
      POCPu
      2.413657770800628
      G+C Difference (%)
      7.359999999999999
      0 references
      Ignicoccus pacificus
      16S Identity %
      25.774754346182917
      POCPu
      2.0408163265306123
      G+C Difference (%)
      9.18
      0 references
      Pyrodictium brockii
      16S Identity %
      25.6797583081571
      0 references
      Sulfurisphaera javensis
      16S Identity %
      25.616438356164384
      POCPu
      2.147099132023755
      G+C Difference (%)
      7.32
      0 references
      Vulcanisaeta distributa
      16S Identity %
      25.47683923705722
      POCPu
      1.6225582860743542
      G+C Difference (%)
      6.43
      0 references
      Sulfophobococcus zilligii
      16S Identity %
      25.448275862068964
      0 references
      Thermosphaera aggregans
      16S Identity %
      25.40983606557377
      POCPu
      1.6945888696321971
      G+C Difference (%)
      7.729999999999997
      0 references
      Pyrofollis japonicus
      16S Identity %
      25.40983606557377
      POCPu
      1.9178082191780823
      G+C Difference (%)
      10.36
      0 references
      Methanocaldococcus bathoardescens
      16S Identity %
      25.324232081911262
      POCPu
      2.1085441877521087
      G+C Difference (%)
      8.21
      0 references
      Staphylothermus hellenicus
      16S Identity %
      24.982935153583618
      POCPu
      2.0648967551622417
      G+C Difference (%)
      2.1599999999999966
      0 references
      Thermocladium modestius
      16S Identity %
      24.861878453038674
      POCPu
      1.9391293180942597
      G+C Difference (%)
      14.14
      0 references
      Nitrosopumilus piranensis
      16S Identity %
      24.846834581347856
      POCPu
      18.574805808848364
      G+C Difference (%)
      5.18
      0 references
      Nitrosopumilus cobalaminigenes
      16S Identity %
      24.846834581347856
      0 references
      Nitrosopumilus adriaticus
      16S Identity %
      24.846834581347856
      POCPu
      18.21977287909152
      G+C Difference (%)
      5.590000000000003
      0 references
      Thermofilum uzonense
      16S Identity %
      24.829467939972716
      POCPu
      1.66270783847981
      G+C Difference (%)
      8.939999999999998
      0 references
      Nitrosopumilus oxyclinae
      16S Identity %
      24.778761061946902
      0 references
      Nitrosopumilus ureiphilus
      16S Identity %
      24.778761061946902
      0 references
      Sulfurisphaera tokodaii
      16S Identity %
      24.6922024623803
      POCPu
      2.2851245761462478
      G+C Difference (%)
      6.210000000000001
      0 references
      Caldisphaera lagunensis
      16S Identity %
      24.688796680497926
      POCPu
      1.584009051480294
      G+C Difference (%)
      8.969999999999999
      0 references
      Fervidicoccus fontis
      16S Identity %
      24.624829467939975
      POCPu
      1.7731878409976618
      G+C Difference (%)
      1.5300000000000011
      0 references
      Sulfolobus yangmingensis
      16S Identity %
      24.58904109589041
      0 references
      Sulfurisphaera ohwakuensis
      16S Identity %
      24.57221081451061
      POCPu
      2.1395076201641263
      G+C Difference (%)
      6.25
      0 references
      Desulfurococcus mucosus
      16S Identity %
      24.538619275461382
      POCPu
      1.825951825951826
      G+C Difference (%)
      14.14
      0 references
      Nitrosarchaeum koreense
      16S Identity %
      24.45414847161572
      POCPu
      19.323163247413643
      G+C Difference (%)
      6.329999999999998
      0 references
      Methanotorris formicicus
      16S Identity %
      24.385245901639344
      POCPu
      2.248170094109446
      G+C Difference (%)
      6.560000000000002
      0 references
      Ignicoccus hospitalis
      16S Identity %
      24.22096317280453
      POCPu
      2.0884754129485477
      G+C Difference (%)
      17.520000000000003
      0 references
      Saccharolobus shibatae
      16S Identity %
      24.04109589041096
      POCPu
      2.203658360939075
      G+C Difference (%)
      3.6400000000000006
      0 references
      Saccharolobus solfataricus
      16S Identity %
      23.972602739726025
      POCPu
      2.1261616446071527
      G+C Difference (%)
      3.1599999999999966
      0 references
      Desulfurococcus amylolyticus
      16S Identity %
      23.96694214876033
      POCPu
      1.8794807207905444
      G+C Difference (%)
      6.159999999999997
      0 references
      Nitrososphaera viennensis
      16S Identity %
      23.82573179033356
      POCPu
      36.993964375092006
      G+C Difference (%)
      13.719999999999999
      0 references
      Methanocaldococcus fervens
      16S Identity %
      23.444976076555022
      POCPu
      2.177925433739387
      G+C Difference (%)
      6.780000000000001
      0 references
      Thermogladius calderae
      16S Identity %
      23.25581395348837
      POCPu
      1.7311021350259663
      G+C Difference (%)
      16.64
      0 references
      Sulfolobus acidocaldarius
      16S Identity %
      23.119015047879618
      POCPu
      2.070764715473667
      G+C Difference (%)
      2.289999999999999
      0 references
      Nitrosopumilus zosterae
      16S Identity %
      23.008849557522122
      POCPu
      18.60662701784197
      G+C Difference (%)
      5.090000000000003
      0 references
      Methanothermus sociabilis
      16S Identity %
      22.631220177232446
      0 references
      Nitrosopumilus maritimus
      16S Identity %
      22.626112759643917
      POCPu
      18.829694323144107
      G+C Difference (%)
      4.829999999999998
      0 references
      Methanotorris igneus
      16S Identity %
      22.33606557377049
      POCPu
      2.1607142857142856
      G+C Difference (%)
      6.700000000000003
      0 references
      CAZyme
      GH0
      Occurance
      4
      0 references
      GH1
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH13
      Occurance
      1
      0 references
      GH46
      Occurance
      1
      0 references
      GH76
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH130
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT2
      Occurance
      13
      0 references
      GT22
      Occurance
      1
      0 references
      GT4
      Occurance
      9
      0 references
      GT1
      Occurance
      4
      0 references
      GT55
      Occurance
      2
      0 references
      GT20
      Occurance
      1
      0 references
      GT81
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM32
      Occurance
      3
      0 references
      Pathway
      Ecosystem
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q327341&oldid=5462916"