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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
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Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine degradation / rank
 
Normal rank
Property / Pathway: Glycine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Proline degradation / rank
 
Normal rank
Property / Pathway: Proline degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Succinate conversion to propionate / rank
 
Normal rank
Property / Pathway: Succinate conversion to propionate / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 1.7
Amount1.7
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 4.6
Amount4.6
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_002503985.1_ASM250398v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002503985.1_ASM250398v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017931_18.fna / rank
 
Normal rank
Property / MAGs: 3300017931_18.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017941_21.fna / rank
 
Normal rank
Property / MAGs: 3300017941_21.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017998_25.fna / rank
 
Normal rank
Property / MAGs: 3300017998_25.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025419_12.fna / rank
 
Normal rank
Property / MAGs: 3300025419_12.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025442_16.fna / rank
 
Normal rank
Property / MAGs: 3300025442_16.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025446_18.fna / rank
 
Normal rank
Property / MAGs: 3300025446_18.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025460_11.fna / rank
 
Normal rank
Property / MAGs: 3300025460_11.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025472_22.fna / rank
 
Normal rank
Property / MAGs: 3300025472_22.fna / qualifier
 

Latest revision as of 18:33, 24 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_002503985.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Thermococcus atlanticus
      16S Identity %
      26.412429378531073
      0 references
      Methanothrix harundinacea
      16S Identity %
      26.308139534883722
      POCPu
      4.186834462729913
      G+C Difference (%)
      11.64
      0 references
      Methanocaldococcus fervens
      16S Identity %
      26.209677419354836
      POCPu
      3.462686567164179
      G+C Difference (%)
      34.92
      0 references
      Thermococcus eurythermalis
      16S Identity %
      26.174496644295303
      POCPu
      3.559789420907496
      G+C Difference (%)
      13.689999999999998
      0 references
      Thermococcus gammatolerans
      16S Identity %
      25.852660300136428
      POCPu
      3.887744593202884
      G+C Difference (%)
      13.579999999999998
      0 references
      Thermococcus profundus
      16S Identity %
      25.56701030927835
      POCPu
      3.966597077244259
      G+C Difference (%)
      14.049999999999997
      0 references
      Thermococcus zilligii
      16S Identity %
      25.49019607843137
      POCPu
      3.944055944055944
      G+C Difference (%)
      12.660000000000004
      0 references
      Thermococcus coalescens
      16S Identity %
      25.486250838363517
      0 references
      Methanomethylophilus alvi
      16S Identity %
      25.40291634689179
      POCPu
      5.768081291093844
      G+C Difference (%)
      11.549999999999997
      0 references
      Thermococcus waiotapuensis
      16S Identity %
      25.3618194348725
      0 references
      Thermococcus kodakarensis
      16S Identity %
      25.352112676056336
      POCPu
      3.6291324881928912
      G+C Difference (%)
      15.14
      0 references
      Thermococcus barossii
      16S Identity %
      25.29209621993127
      POCPu
      3.925233644859813
      G+C Difference (%)
      12.450000000000003
      0 references
      Methanocaldococcus infernus
      16S Identity %
      25.268817204301076
      POCPu
      3.548994974874372
      G+C Difference (%)
      33.52
      0 references
      Thermococcus celer
      16S Identity %
      25.260235947258845
      POCPu
      4.246686502569651
      G+C Difference (%)
      10.689999999999998
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      25.23489932885906
      POCPu
      4.829545454545454
      G+C Difference (%)
      13.590000000000003
      0 references
      Thermococcus pacificus
      16S Identity %
      25.20775623268698
      POCPu
      4.099480732440557
      G+C Difference (%)
      12.899999999999999
      0 references
      Methanocaldococcus lauensis
      16S Identity %
      25.05526897568165
      POCPu
      3.1973203410475026
      G+C Difference (%)
      38.09
      0 references
      Thermococcus peptonophilus
      16S Identity %
      25.03448275862069
      POCPu
      3.8747346072186835
      G+C Difference (%)
      15.399999999999999
      0 references
      Methanotorris formicicus
      16S Identity %
      25
      POCPu
      2.888283378746594
      G+C Difference (%)
      34.7
      0 references
      Thermococcus litoralis
      16S Identity %
      24.949698189134807
      POCPu
      3.4704064654147846
      G+C Difference (%)
      24.049999999999997
      0 references
      Thermococcus gorgonarius
      16S Identity %
      24.87939352170917
      POCPu
      4.141018466703973
      G+C Difference (%)
      15.469999999999999
      0 references
      Picrophilus torridus
      16S Identity %
      24.64550979068197
      0 references
      Thermoplasma volcanium
      16S Identity %
      24.58025520483546
      POCPu
      5.615292712066906
      G+C Difference (%)
      27.22
      0 references
      Thermococcus indicus
      16S Identity %
      24.542897327707454
      POCPu
      3.4499514091350827
      G+C Difference (%)
      12.280000000000001
      0 references
      Thermococcus aciditolerans
      16S Identity %
      24.53637660485021
      0 references
      Thermococcus siculi
      16S Identity %
      24.43064182194617
      POCPu
      3.6902286902286905
      G+C Difference (%)
      12.149999999999999
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      24.42953020134228
      POCPu
      4.904632152588556
      G+C Difference (%)
      29.840000000000003
      0 references
      Thermoplasma acidophilum
      16S Identity %
      24.346076458752517
      POCPu
      5.640243902439025
      G+C Difference (%)
      21.15
      0 references
      Methanotorris igneus
      16S Identity %
      24.346076458752517
      POCPu
      3.199320498301246
      G+C Difference (%)
      34.84
      0 references
      Thermococcus fumicolans
      16S Identity %
      24.30939226519337
      0 references
      Methanocaldococcus jannaschii
      16S Identity %
      24.295302013422816
      POCPu
      3.2339001951491495
      G+C Difference (%)
      35.85
      0 references
      Thermococcus stetteri
      16S Identity %
      24.292615596963422
      POCPu
      3.7584565271861687
      G+C Difference (%)
      14.670000000000002
      0 references
      Picrophilus oshimae
      16S Identity %
      24.22818791946309
      POCPu
      5.157766990291262
      G+C Difference (%)
      31.160000000000004
      0 references
      Thermococcus thioreducens
      16S Identity %
      24.021962937542895
      POCPu
      3.657626275192834
      G+C Difference (%)
      13.689999999999998
      0 references
      Methanocella arvoryzae
      16S Identity %
      24.010731052984575
      POCPu
      3.5425730267246736
      G+C Difference (%)
      12.54
      0 references
      Methanocaldococcus bathoardescens
      16S Identity %
      24.010731052984575
      POCPu
      3.5440047253396343
      G+C Difference (%)
      36.35
      0 references
      Thermococcus sibiricus
      16S Identity %
      23.994638069705093
      POCPu
      3.484320557491289
      G+C Difference (%)
      26.939999999999998
      0 references
      Methanomassiliicoccus luminyensis
      16S Identity %
      23.93689986282579
      POCPu
      7.708381704202461
      G+C Difference (%)
      6.660000000000004
      0 references
      Thermococcus thermotolerans
      16S Identity %
      23.9247311827957
      POCPu
      3.584858360491351
      G+C Difference (%)
      13.649999999999999
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      23.90276839972991
      POCPu
      2.8857479387514724
      G+C Difference (%)
      34.25
      0 references
      Thermococcus celericrescens
      16S Identity %
      23.876592890677397
      POCPu
      3.5178236397748592
      G+C Difference (%)
      12.850000000000001
      0 references
      Acidiplasma cupricumulans
      16S Identity %
      23.601637107776263
      0 references
      Thermococcus acidaminovorans
      16S Identity %
      23.582925122463262
      0 references
      Thermococcus aegaeus
      16S Identity %
      23.392612859097127
      0 references
      Thermogymnomonas acidicola
      16S Identity %
      23.32382310984308
      POCPu
      7.284500202347227
      G+C Difference (%)
      10.71
      0 references
      Thermococcus cleftensis
      16S Identity %
      23.19034852546917
      POCPu
      4.069767441860465
      G+C Difference (%)
      11.32
      0 references
      Methanolinea tarda
      16S Identity %
      22.70233196159122
      POCPu
      4.098837209302326
      G+C Difference (%)
      12.310000000000002
      0 references
      Methanosphaerula palustris
      16S Identity %
      22.476446837146703
      POCPu
      3.69792826910225
      G+C Difference (%)
      11.79
      0 references
      Methanothrix soehngenii
      16S Identity %
      22.431161853593014
      POCPu
      3.6990332072299283
      G+C Difference (%)
      16.15
      0 references
      Methanoregula boonei
      16S Identity %
      21.94955691888207
      POCPu
      3.940537989617744
      G+C Difference (%)
      12.630000000000003
      0 references
      CAZyme
      GH6
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH15
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH19
      Occurance
      2
      0 references
      GH38
      Occurance
      1
      0 references
      GH57
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GT66
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT2
      Occurance
      11
      0 references
      GT1
      Occurance
      4
      0 references
      GT4
      Occurance
      8
      0 references
      GT75
      Occurance
      1
      0 references
      GT0
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CE4
      Occurance
      2
      0 references
      CE12
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM5
      Occurance
      2
      0 references
      Pathway
       
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