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Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank
 
Normal rank
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank
 
Normal rank
Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / rank
 
Normal rank
Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / qualifier
 
Property / Pathway
 
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank
 
Normal rank
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier
 
Property / Pathway
 
Property / Pathway: V/A-type ATPase, prokaryotes / rank
 
Normal rank
Property / Pathway: V/A-type ATPase, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / rank
 
Normal rank
Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / qualifier
 
Property / Pathway
 
Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank
 
Normal rank
Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Serine degradation / rank
 
Normal rank
Property / Pathway: Serine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation V / rank
 
Normal rank
Property / Pathway: Arginine degradation V / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:formate lyase / rank
 
Normal rank
Property / Pathway: Pyruvate:formate lyase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 6.8
Amount6.8
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.14
Amount0.14
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 13.4
Amount13.4
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 2.1
Amount2.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 13.2
Amount13.2
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 7.8
Amount7.8
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.16
Amount0.16
Unit1
Property / MAGs
 
Property / MAGs: VincentC_2016__MM004_2_megahit__bin_21.fa / rank
 
Normal rank
Property / MAGs: VincentC_2016__MM004_2_megahit__bin_21.fa / qualifier
 

Latest revision as of 09:48, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000758905.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Mogibacterium timidum
      16S Identity %
      26.850605652759086
      POCPu
      29.53245879582913
      G+C Difference (%)
      5.439999999999998
      0 references
      Clostridium formicaceticum
      16S Identity %
      26.56875834445928
      POCPu
      10.171612441902038
      G+C Difference (%)
      3.3299999999999983
      0 references
      Mogibacterium pumilum
      16S Identity %
      26.556291390728475
      POCPu
      26.47631408176509
      G+C Difference (%)
      1.6199999999999974
      0 references
      Fusibacter paucivorans
      16S Identity %
      26.294820717131472
      POCPu
      11.042944785276074
      G+C Difference (%)
      2.990000000000002
      0 references
      Mogibacterium kristiansenii
      16S Identity %
      26.274228284278532
      POCPu
      25.297805642633232
      G+C Difference (%)
      11.160000000000004
      0 references
      Gottschalkia purinilytica
      16S Identity %
      26.11592271818787
      POCPu
      11.839006636694497
      G+C Difference (%)
      10.04
      0 references
      Guggenheimella bovis
      16S Identity %
      25.925925925925924
      0 references
      Anaerovirgula multivorans
      16S Identity %
      25.745257452574528
      POCPu
      9.545035351982785
      G+C Difference (%)
      3.9299999999999997
      0 references
      Eubacterium sulci
      16S Identity %
      25.67102546455609
      POCPu
      38.84576442794465
      G+C Difference (%)
      1.0600000000000023
      0 references
      Peptoclostridium acidaminophilum
      16S Identity %
      25.666666666666664
      POCPu
      14.054813773717498
      G+C Difference (%)
      5.219999999999999
      0 references
      Alkaliphilus oremlandii
      16S Identity %
      25.63758389261745
      POCPu
      14.252820630900299
      G+C Difference (%)
      2.6000000000000014
      0 references
      Wukongibacter baidiensis
      16S Identity %
      25.62674094707521
      0 references
      Mogibacterium neglectum
      16S Identity %
      25.609756097560975
      POCPu
      29.421654337592468
      G+C Difference (%)
      1.5499999999999972
      0 references
      Acidaminobacter hydrogenoformans
      16S Identity %
      25.550964187327825
      POCPu
      12.775140267587398
      G+C Difference (%)
      9.899999999999999
      0 references
      Isachenkonia alkalipeptolytica
      16S Identity %
      25.449700199866754
      POCPu
      12.438625204582651
      G+C Difference (%)
      4.93
      0 references
      Mogibacterium vescum
      16S Identity %
      25.338753387533874
      0 references
      Anaerosolibacter carboniphilus
      16S Identity %
      25.26614620298084
      POCPu
      10.965323336457358
      G+C Difference (%)
      0.9299999999999997
      0 references
      Terrisporobacter hibernicus
      16S Identity %
      25.25320729237002
      0 references
      Baileyella intestinalis
      16S Identity %
      25.174825174825177
      POCPu
      26.340996168582375
      G+C Difference (%)
      7.549999999999997
      0 references
      Aminipila terrae
      16S Identity %
      25.17385257301808
      POCPu
      22.29064039408867
      G+C Difference (%)
      1.8800000000000026
      0 references
      Lentihominibacter hominis
      16S Identity %
      25.16175413371675
      POCPu
      27.87790697674419
      G+C Difference (%)
      1.0200000000000031
      0 references
      Natronincola peptidivorans
      16S Identity %
      25.12110726643599
      POCPu
      11.925668776802125
      G+C Difference (%)
      3.3900000000000006
      0 references
      Eubacterium nodatum
      16S Identity %
      25.071839080459768
      POCPu
      41.199999999999996
      G+C Difference (%)
      0.759999999999998
      0 references
      Eubacterium tenue
      16S Identity %
      25.067750677506773
      0 references
      Eubacterium infirmum
      16S Identity %
      24.89905787348587
      POCPu
      38.23151125401929
      G+C Difference (%)
      1.3200000000000003
      0 references
      Mogibacterium diversum
      16S Identity %
      24.89655172413793
      POCPu
      27.008491182233836
      G+C Difference (%)
      2.1000000000000014
      0 references
      Hornefia porci
      16S Identity %
      24.850746268656717
      POCPu
      31.508951406649615
      G+C Difference (%)
      13.43
      0 references
      Terrisporobacter mayombei
      16S Identity %
      24.779959377115777
      POCPu
      11.52317880794702
      G+C Difference (%)
      10.030000000000001
      0 references
      Peptostreptococcus faecalis
      16S Identity %
      24.764468371467025
      POCPu
      14.348850913376547
      G+C Difference (%)
      8.43
      0 references
      Romboutsia hominis
      16S Identity %
      24.762550881953867
      POCPu
      13.309608540925266
      G+C Difference (%)
      10.559999999999999
      0 references
      Aminicella lysinilytica
      16S Identity %
      24.674434544208363
      POCPu
      35.63615428900403
      G+C Difference (%)
      6.880000000000003
      0 references
      Alkaliphilus transvaalensis
      16S Identity %
      24.65753424657534
      POCPu
      11.517295597484276
      G+C Difference (%)
      4.909999999999997
      0 references
      Eubacterium brachy
      16S Identity %
      24.598183088749124
      POCPu
      30.956711531465984
      G+C Difference (%)
      0.9699999999999989
      0 references
      Aminipila butyrica
      16S Identity %
      24.502402196293755
      POCPu
      23.43361230490839
      G+C Difference (%)
      5.990000000000002
      0 references
      Anaerovorax odorimutans
      16S Identity %
      24.448897795591183
      POCPu
      21.468793993430317
      G+C Difference (%)
      7.370000000000001
      0 references
      Aminipila luticellarii
      16S Identity %
      24.23580786026201
      POCPu
      27.04516129032258
      G+C Difference (%)
      3.730000000000004
      0 references
      Eubacterium minutum
      16S Identity %
      24.233983286908078
      POCPu
      37.34735413839891
      G+C Difference (%)
      6.039999999999999
      0 references
      Hornefia butyriciproducens
      16S Identity %
      24.227865477007548
      POCPu
      33.248873873873876
      G+C Difference (%)
      12.75
      0 references
      Hominibacterium faecale
      16S Identity %
      24.212736179146255
      POCPu
      20.56818181818182
      G+C Difference (%)
      8.520000000000003
      0 references
      Crassaminicella indica
      16S Identity %
      24.03718459495352
      POCPu
      17.96733212341198
      G+C Difference (%)
      7.759999999999998
      0 references
      Peptostreptococcus porci
      16S Identity %
      23.841961852861036
      POCPu
      16.981707317073173
      G+C Difference (%)
      5.689999999999998
      0 references
      Eubacterium saphenum
      16S Identity %
      23.451032644903396
      POCPu
      25.706829056111353
      G+C Difference (%)
      1.6899999999999977
      0 references
      Gallibacter intestinalis
      16S Identity %
      23.43211578221916
      POCPu
      30.859916782246877
      G+C Difference (%)
      2.039999999999999
      0 references
      Peptoclostridium litorale
      16S Identity %
      23.324396782841823
      POCPu
      13.61731843575419
      G+C Difference (%)
      2.3200000000000003
      0 references
      Salimesophilobacter vulgaris
      16S Identity %
      23.24621733149931
      0 references
      Soehngenia longivitae
      16S Identity %
      22.923816060398078
      POCPu
      16.959798994974875
      G+C Difference (%)
      7
      0 references
      Fusibacter fontis
      16S Identity %
      22.548365577051367
      0 references
      Tissierella creatinini
      16S Identity %
      22.51832111925383
      POCPu
      14.289439374185136
      G+C Difference (%)
      3.1199999999999974
      0 references
      Fusibacter bizertensis
      16S Identity %
      22.32620320855615
      POCPu
      11.536063188526294
      G+C Difference (%)
      3.769999999999996
      0 references
      Fusibacter tunisiensis
      16S Identity %
      22.28956228956229
      POCPu
      13.750641354540791
      G+C Difference (%)
      0.990000000000002
      0 references
      Paraclostridium tenue
      POCPu
      12.683388547089447
      G+C Difference (%)
      12
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH73
      Occurance
      1
      0 references
      GH6
      Occurance
      1
      0 references
      GH25
      Occurance
      3
      0 references
      GH28
      Occurance
      1
      0 references
      GH38
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH23
      Occurance
      1
      0 references
      GT2
      Occurance
      7
      0 references
      GT51
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      7
      0 references
      GT22
      Occurance
      1
      0 references
      GT32
      Occurance
      1
      0 references
      GT28
      Occurance
      3
      0 references
      GT26
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      10
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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