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Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GH6 / rank
 
Normal rank
Property / CAZyme: GH6 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH77 / rank
 
Normal rank
Property / CAZyme: GH77 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH100 / rank
 
Normal rank
Property / CAZyme: GH100 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT83 / rank
 
Normal rank
Property / CAZyme: GT83 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT51 / rank
 
Normal rank
Property / CAZyme: GT51 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 12
Amount12
Unit1
Property / CAZyme
 
Property / CAZyme: GT5 / rank
 
Normal rank
Property / CAZyme: GT5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT30 / rank
 
Normal rank
Property / CAZyme: GT30 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT28 / rank
 
Normal rank
Property / CAZyme: GT28 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT32 / rank
 
Normal rank
Property / CAZyme: GT32 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT19 / rank
 
Normal rank
Property / CAZyme: GT19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT11 / rank
 
Normal rank
Property / CAZyme: GT11 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT81 / rank
 
Normal rank
Property / CAZyme: GT81 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE11 / rank
 
Normal rank
Property / CAZyme: CE11 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank
 
Normal rank
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank
 
Normal rank
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank
 
Normal rank
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier
 
Property / Pathway
 
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / rank
 
Normal rank
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / rank
 
Normal rank
Property / Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin / qualifier
 
Property / Pathway
 
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank
 
Normal rank
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier
 
Property / Pathway
 
Property / Pathway: Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine / rank
 
Normal rank
Property / Pathway: Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine / qualifier
 
Property / Pathway
 
Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / rank
 
Normal rank
Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / qualifier
 
Property / Pathway
 
Property / Pathway: Photosystem II / rank
 
Normal rank
Property / Pathway: Photosystem II / qualifier
 
Property / Pathway
 
Property / Pathway: Photosystem I / rank
 
Normal rank
Property / Pathway: Photosystem I / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine cleavage system / rank
 
Normal rank
Property / Pathway: Glycine cleavage system / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine / rank
 
Normal rank
Property / Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / rank
 
Normal rank
Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / rank
 
Normal rank
Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / qualifier
 
Property / Pathway
 
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank
 
Normal rank
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / rank
 
Normal rank
Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / qualifier
 
Property / Pathway
 
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / rank
 
Normal rank
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / rank
 
Normal rank
Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine degradation / rank
 
Normal rank
Property / Pathway: Glycine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (oxidative phase) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (oxidative phase) / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 09:08, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000634515.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Prochlorothrix hollandica
      16S Identity %
      90.03412969283276
      POCPu
      13.49703097416145
      G+C Difference (%)
      22.689999999999998
      0 references
      Alkalinema pantanalense
      16S Identity %
      89.33241569167241
      0 references
      Pantanalinema rosaneae
      16S Identity %
      88.7130075705437
      0 references
      Romeriopsis marina
      16S Identity %
      88.56140350877193
      0 references
      Rubidibacter lacunae
      16S Identity %
      88.40472673559823
      POCPu
      15.26325793575366
      G+C Difference (%)
      24.72
      0 references
      Romeriopsis navalis
      16S Identity %
      88.32417582417582
      0 references
      Fortiea necridiiformans
      16S Identity %
      88.28337874659401
      0 references
      Iphinoe spelaeobios
      16S Identity %
      88.14968814968816
      0 references
      Kryptousia macronema
      16S Identity %
      88.04945054945054
      0 references
      Amazonocrinis nigriterrae
      16S Identity %
      87.94037940379404
      0 references
      Foliisarcina bertiogensis
      16S Identity %
      87.8637331440738
      0 references
      Desmonostoc salinum
      16S Identity %
      87.70604395604396
      0 references
      Planktothricoides raciborskii
      16S Identity %
      87.70131771595901
      0 references
      Atlanticothrix silvestris
      16S Identity %
      87.65081618168914
      0 references
      Amazonocrinis malviyae
      16S Identity %
      87.36616702355461
      0 references
      Cephalothrix komarekiana
      16S Identity %
      87.36263736263736
      0 references
      Nostoc neudorfense
      16S Identity %
      87.25289706884799
      0 references
      Kryptousia microlepis
      16S Identity %
      87.19889883000688
      0 references
      Gloeomargarita lithophora
      16S Identity %
      87.1864406779661
      0 references
      Aliinostoc morphoplasticum
      16S Identity %
      87.17774762550881
      0 references
      Dendronalium phyllosphericum
      16S Identity %
      87.14488636363636
      0 references
      Halotia longispora
      16S Identity %
      87.13007570543702
      0 references
      Desikacharya soli
      16S Identity %
      87.05479452054794
      0 references
      Halotia wernerae
      16S Identity %
      86.99242945629732
      0 references
      Cephalothrix lacustris
      16S Identity %
      86.95054945054946
      0 references
      Halotia branconii
      16S Identity %
      86.92360633172747
      0 references
      Halospirulina tapeticola
      16S Identity %
      86.76789587852495
      0 references
      Desikacharya nostocoides
      16S Identity %
      86.67122351332878
      0 references
      Crinalium epipsammum
      16S Identity %
      86.59722222222223
      0 references
      Chalicogloea cavernicola
      16S Identity %
      85.21617852161785
      0 references
      Desikacharya thermotolerans
      16S Identity %
      85.20814880425155
      0 references
      Ancylothrix terrestris
      16S Identity %
      85.09485094850947
      0 references
      Acetonema longum
      16S Identity %
      83.29952670723462
      POCPu
      3.508462623413258
      G+C Difference (%)
      18.86
      0 references
      Alborzia kermanshahica
      16S Identity %
      82.5503355704698
      0 references
      Caldisalinibacter kiritimatiensis
      16S Identity %
      82.07739307535643
      POCPu
      3.820172373631493
      G+C Difference (%)
      1.379999999999999
      0 references
      Alkalihalobacillus algicola
      16S Identity %
      81.97831978319783
      POCPu
      3.7795831861533027
      G+C Difference (%)
      9.229999999999997
      0 references
      Oceanobacillus rekensis
      16S Identity %
      81.89189189189189
      POCPu
      3.601575689364097
      G+C Difference (%)
      5.950000000000003
      0 references
      Laceyella tengchongensis
      16S Identity %
      81.87772925764192
      POCPu
      4.318734793187348
      G+C Difference (%)
      17.549999999999997
      0 references
      Desulfovectis peckii
      16S Identity %
      81.7687074829932
      0 references
      Bacillus isabeliae
      16S Identity %
      81.48400272294077
      0 references
      Acetivibrio thermocellus
      16S Identity %
      81.34328358208955
      POCPu
      3.7465125548027105
      G+C Difference (%)
      7.490000000000002
      0 references
      Heliomicrobium modesticaldum
      16S Identity %
      80.99794941900204
      POCPu
      4.623483634699016
      G+C Difference (%)
      25.479999999999997
      0 references
      Oceanobacillus kapialis
      16S Identity %
      80.73970690858339
      0 references
      Frankia irregularis
      16S Identity %
      80.48780487804879
      0 references
      Frankia asymbiotica
      16S Identity %
      80.3122878479294
      0 references
      Frankia inefficax
      16S Identity %
      80.27210884353741
      0 references
      Pseudofrankia asymbiotica
      POCPu
      1.6588184931506849
      G+C Difference (%)
      40.44
      0 references
      Parafrankia irregularis
      POCPu
      1.670390467070965
      G+C Difference (%)
      39.39
      0 references
      Pseudofrankia inefficax
      POCPu
      1.7709161085253717
      G+C Difference (%)
      40.81
      0 references
      Oceanobacillus oncorhynchi
      POCPu
      3.1047045778552196
      G+C Difference (%)
      7.530000000000001
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH13
      Occurance
      5
      0 references
      GH6
      Occurance
      3
      0 references
      GH28
      Occurance
      1
      0 references
      GH77
      Occurance
      1
      0 references
      GH100
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH19
      Occurance
      2
      0 references
      GH23
      Occurance
      1
      0 references
      GT4
      Occurance
      10
      0 references
      GT13
      Occurance
      2
      0 references
      GT35
      Occurance
      1
      0 references
      GT83
      Occurance
      1
      0 references
      GT51
      Occurance
      1
      0 references
      GT2
      Occurance
      12
      0 references
      GT5
      Occurance
      2
      0 references
      GT0
      Occurance
      3
      0 references
      GT30
      Occurance
      1
      0 references
      GT28
      Occurance
      3
      0 references
      GT32
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT11
      Occurance
      1
      0 references
      GT1
      Occurance
      1
      0 references
      GT81
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM48
      Occurance
      2
      0 references
      CBM50
      Occurance
      4
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      Pathway
      MAGs
      no MAG matches found
      0 references
       
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