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Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / rank
 
Normal rank
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank
 
Normal rank
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / rank
 
Normal rank
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Cytochrome bc1 complex respiratory unit / rank
 
Normal rank
Property / Pathway: Cytochrome bc1 complex respiratory unit / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank
 
Normal rank
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 4.2
Amount4.2
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.66
Amount0.66
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 14.6
Amount14.6
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 1.05
Amount1.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.21
Amount0.21
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 08:48, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000513055.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Mesorhizobium tianshanense
      16S Identity %
      26.344452008168822
      POCPu
      4.1017894492214735
      G+C Difference (%)
      32.98
      0 references
      Endobacterium cereale
      16S Identity %
      26.27637848876787
      POCPu
      4.050742395848349
      G+C Difference (%)
      29.630000000000003
      0 references
      Neorhizobium tomejilense
      16S Identity %
      26.22615803814714
      POCPu
      4.086374197075305
      G+C Difference (%)
      32.31
      0 references
      Mesorhizobium tamadayense
      16S Identity %
      26.125511596180083
      POCPu
      4.264598982311607
      G+C Difference (%)
      34.03
      0 references
      Mesorhizobium norvegicum
      16S Identity %
      26.05729877216917
      POCPu
      3.9700290762692907
      G+C Difference (%)
      33.269999999999996
      0 references
      Pararhizobium giardinii
      16S Identity %
      26.05442176870748
      0 references
      Rhizobium cellulosilyticum
      16S Identity %
      26.03953646898432
      0 references
      Oricola indica
      16S Identity %
      26.004084411164058
      POCPu
      5.357742693987236
      G+C Difference (%)
      32.95
      0 references
      Ensifer canadensis
      16S Identity %
      25.98639455782313
      POCPu
      3.7143184684168293
      G+C Difference (%)
      31.82
      0 references
      Mesorhizobium neociceri
      16S Identity %
      25.979381443298973
      POCPu
      4.2367601246105915
      G+C Difference (%)
      33.23
      0 references
      Bartonella apis
      16S Identity %
      25.936010891763107
      POCPu
      8.278867102396514
      G+C Difference (%)
      16.310000000000002
      0 references
      Ferirhizobium litorale
      16S Identity %
      25.936010891763107
      POCPu
      5.071609098567818
      G+C Difference (%)
      32.36
      0 references
      Shinella zoogloeoides
      16S Identity %
      25.9131633356306
      POCPu
      4.936305732484077
      G+C Difference (%)
      35.290000000000006
      0 references
      Neorhizobium huautlense
      16S Identity %
      25.910652920962203
      POCPu
      4.703161141094834
      G+C Difference (%)
      30.9
      0 references
      Mesorhizobium chacoense
      16S Identity %
      25.908156271418783
      0 references
      Mesorhizobium wenxiniae
      16S Identity %
      25.78231292517007
      POCPu
      4.640401903754627
      G+C Difference (%)
      32.74
      0 references
      Methylocella silvestris
      16S Identity %
      25.74931880108992
      POCPu
      5.8370490474260235
      G+C Difference (%)
      33.94
      0 references
      Brucella cytisi
      16S Identity %
      25.681198910081743
      POCPu
      4.911131898971001
      G+C Difference (%)
      26.380000000000003
      0 references
      Mariluticola halotolerans
      16S Identity %
      25.681198910081743
      POCPu
      6.374036890030353
      G+C Difference (%)
      29.049999999999997
      0 references
      Rhizobium ruizarguesonis
      16S Identity %
      25.63226247436774
      POCPu
      3.692234397332063
      G+C Difference (%)
      31.61
      0 references
      Rhodoblastus acidophilus
      16S Identity %
      25.6305385139741
      POCPu
      5.424921310868358
      G+C Difference (%)
      36.099999999999994
      0 references
      Rhizobium laguerreae
      16S Identity %
      25.6305385139741
      POCPu
      4.001970200714198
      G+C Difference (%)
      31.64
      0 references
      Rhizobium leguminosarum
      16S Identity %
      25.6305385139741
      POCPu
      3.791020021324488
      G+C Difference (%)
      31.439999999999998
      0 references
      Brucella anthropi
      16S Identity %
      25.61307901907357
      POCPu
      4.975124378109453
      G+C Difference (%)
      26.990000000000002
      0 references
      Brucella lupini
      16S Identity %
      25.47683923705722
      0 references
      Methyloferula stellata
      16S Identity %
      25.34246575342466
      POCPu
      5.875227135069655
      G+C Difference (%)
      30.4
      0 references
      Microvirga brassicacearum
      16S Identity %
      24.98298162014976
      POCPu
      5.108514190317195
      G+C Difference (%)
      33.12
      0 references
      Kordiimonas aquimaris
      16S Identity %
      24.878048780487806
      POCPu
      6.533333333333332
      G+C Difference (%)
      17.53
      0 references
      Ensifer alkalisoli
      16S Identity %
      24.863760217983653
      0 references
      Rhodoplanes serenus
      16S Identity %
      24.829931972789115
      POCPu
      5.041031652989449
      G+C Difference (%)
      41.14
      0 references
      Brucella gallinifaecis
      16S Identity %
      24.827109266943292
      POCPu
      6.340057636887608
      G+C Difference (%)
      21.83
      0 references
      Methylosinus trichosporium
      16S Identity %
      24.795640326975477
      POCPu
      4.855047153335662
      G+C Difference (%)
      36.650000000000006
      0 references
      Brucella grignonensis
      16S Identity %
      24.7612551159618
      POCPu
      5.390401146131805
      G+C Difference (%)
      25.009999999999998
      0 references
      Shinella lacus
      16S Identity %
      24.676209952283575
      POCPu
      4.164511122607347
      G+C Difference (%)
      34.47
      0 references
      Bradyrhizobium ripae
      16S Identity %
      24.660326086956523
      0 references
      Bradyrhizobium australiense
      16S Identity %
      24.655647382920108
      POCPu
      4.125472964725986
      G+C Difference (%)
      32.74
      0 references
      Bradyrhizobium australafricanum
      16S Identity %
      24.5578231292517
      POCPu
      3.5834822314869967
      G+C Difference (%)
      34.38
      0 references
      Bradyrhizobium elkanii
      16S Identity %
      24.5578231292517
      POCPu
      3.5135135135135136
      G+C Difference (%)
      34.57
      0 references
      Bradyrhizobium viridifuturi
      16S Identity %
      24.53735435229609
      POCPu
      3.4046890927624878
      G+C Difference (%)
      34.89
      0 references
      Bradyrhizobium pachyrhizi
      16S Identity %
      24.52445652173913
      POCPu
      3.72738108137393
      G+C Difference (%)
      34.58
      0 references
      Bradyrhizobium mercantei
      16S Identity %
      24.52054794520548
      POCPu
      3.5545803620405922
      G+C Difference (%)
      34.85
      0 references
      Mesorhizobium alhagi
      16S Identity %
      24.403544648943424
      POCPu
      4.482147379083312
      G+C Difference (%)
      33.51
      0 references
      Rhodopseudomonas palustris
      16S Identity %
      24.285714285714285
      POCPu
      5.4039965247610775
      G+C Difference (%)
      36.84
      0 references
      Rhizobium beringeri
      16S Identity %
      24.21555252387449
      POCPu
      3.7274597603775868
      G+C Difference (%)
      31.630000000000003
      0 references
      Rhizobium johnstonii
      16S Identity %
      24.147339699863572
      0 references
      Rhizobium brockwellii
      16S Identity %
      24.147339699863572
      POCPu
      4.060848266082248
      G+C Difference (%)
      31.740000000000002
      0 references
      Rhodopseudomonas pseudopalustris
      16S Identity %
      24.01360544217687
      POCPu
      5.166495022313765
      G+C Difference (%)
      35.47
      0 references
      Paenochrobactrum glaciei
      16S Identity %
      23.809523809523807
      POCPu
      6.3392857142857135
      G+C Difference (%)
      19.86
      0 references
      Bradyrhizobium namibiense
      16S Identity %
      23.689584751531655
      0 references
      Kordiimonas lipolytica
      16S Identity %
      22.547683923705723
      0 references
      Rhizobium giardinii
      POCPu
      4.357675906183369
      G+C Difference (%)
      31.519999999999996
      0 references
      Sinorhizobium alkalisoli
      POCPu
      4.940828402366864
      G+C Difference (%)
      33.1
      0 references
      CAZyme
      GH65
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH19
      Occurance
      1
      0 references
      GH23
      Occurance
      2
      0 references
      GH3
      Occurance
      2
      0 references
      GT13
      Occurance
      1
      0 references
      GT41
      Occurance
      1
      0 references
      GT0
      Occurance
      2
      0 references
      GT4
      Occurance
      16
      0 references
      GT1
      Occurance
      1
      0 references
      GT28
      Occurance
      3
      0 references
      GT26
      Occurance
      1
      0 references
      GT2
      Occurance
      16
      0 references
      GT30
      Occurance
      1
      0 references
      GT9
      Occurance
      2
      0 references
      GT83
      Occurance
      1
      0 references
      GT17
      Occurance
      2
      0 references
      PL0
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      MAGs
      no MAG matches found
      0 references
       
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