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Property / MAGs
 
Property / MAGs: HMP_2012__SRS058808__bin_20.fa / rank
 
Normal rank
Property / MAGs: HMP_2012__SRS058808__bin_20.fa / qualifier
 

Latest revision as of 08:01, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000413015.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Treponema ruminis
      16S Identity %
      26.297577854671278
      POCPu
      29.79072630283135
      G+C Difference (%)
      3.450000000000003
      0 references
      Treponema socranskii subsp. paredis
      16S Identity %
      26.157860404435745
      0 references
      Marispirochaeta aestuarii
      16S Identity %
      25.95520421607378
      POCPu
      11.307137129109863
      G+C Difference (%)
      4.939999999999998
      0 references
      Treponema berlinense
      16S Identity %
      25.87268993839836
      POCPu
      36.907621751474124
      G+C Difference (%)
      8.680000000000007
      0 references
      Treponema socranskii subsp. buccale
      16S Identity %
      25.766470971950422
      0 references
      Sphaerochaeta coccoides
      16S Identity %
      25.458115183246072
      0 references
      Treponema succinifaciens
      16S Identity %
      25.359477124183005
      POCPu
      31.607418856259663
      G+C Difference (%)
      8.96
      0 references
      Spirochaeta thermophila
      16S Identity %
      25.212835625409298
      POCPu
      11.742344244984162
      G+C Difference (%)
      12.829999999999998
      0 references
      Sphaerochaeta pleomorpha
      16S Identity %
      25.081645983017637
      POCPu
      12.016329428470003
      G+C Difference (%)
      1.8900000000000006
      0 references
      Spirochaeta aurantia subsp. aurantia
      16S Identity %
      25.01637197118533
      0 references
      Treponema putidum
      16S Identity %
      24.91420727522306
      POCPu
      21.839546191247976
      G+C Difference (%)
      10.810000000000002
      0 references
      Sphaerochaeta globosa
      16S Identity %
      24.885695623775312
      POCPu
      11.448853294503095
      G+C Difference (%)
      0.779999999999994
      0 references
      Spirochaeta isovalerica
      16S Identity %
      24.86910994764398
      POCPu
      10.165729505770939
      G+C Difference (%)
      1.8900000000000006
      0 references
      Sphaerochaeta associata
      16S Identity %
      24.8203788373612
      POCPu
      10.932532673966797
      G+C Difference (%)
      2.6899999999999977
      0 references
      Sediminispirochaeta smaragdinae
      16S Identity %
      24.755062050947092
      POCPu
      11.174016686531585
      G+C Difference (%)
      0.8799999999999955
      0 references
      Treponema saccharophilum
      16S Identity %
      24.72204054937868
      POCPu
      29.946626000762482
      G+C Difference (%)
      5.089999999999996
      0 references
      Sediminispirochaeta bajacaliforniensis
      16S Identity %
      24.673629242819846
      POCPu
      11.040914560770156
      G+C Difference (%)
      1.0599999999999952
      0 references
      Sphaerochaeta halotolerans
      16S Identity %
      24.65753424657534
      POCPu
      12.018007437854767
      G+C Difference (%)
      1.3400000000000034
      0 references
      Treponema peruense
      16S Identity %
      24.59123610202747
      POCPu
      34.92063492063492
      G+C Difference (%)
      6.850000000000001
      0 references
      Teretinema zuelzerae
      16S Identity %
      24.51108213820078
      POCPu
      22.721507519478166
      G+C Difference (%)
      4.6399999999999935
      0 references
      Treponema medium
      16S Identity %
      24.49379490529066
      POCPu
      25.330812854442343
      G+C Difference (%)
      3.8300000000000054
      0 references
      Rectinema cohabitans
      16S Identity %
      24.395029431000655
      0 references
      Treponema bryantii
      16S Identity %
      24.343832020997375
      POCPu
      34.855366961510875
      G+C Difference (%)
      15.950000000000003
      0 references
      Treponema porcinum
      16S Identity %
      24.238227146814403
      POCPu
      41.77160225792444
      G+C Difference (%)
      5.640000000000001
      0 references
      Treponema phagedenis
      16S Identity %
      24.16721097322012
      POCPu
      18.436384138319863
      G+C Difference (%)
      8.180000000000007
      0 references
      Treponema brennaborense
      16S Identity %
      24.06801831262263
      POCPu
      36.85891039712632
      G+C Difference (%)
      3.3799999999999955
      0 references
      Treponema isoptericolens
      16S Identity %
      24.03462050599201
      0 references
      Treponema rectale
      16S Identity %
      23.806228373702425
      POCPu
      33.5619285120532
      G+C Difference (%)
      8.900000000000006
      0 references
      Treponema stenostreptum
      16S Identity %
      23.73438527284681
      0 references
      Breznakiella homolactica
      16S Identity %
      23.726541554959784
      POCPu
      16.776265484018964
      G+C Difference (%)
      4.829999999999998
      0 references
      Gracilinema caldarium
      16S Identity %
      23.69109947643979
      POCPu
      18.45631251179468
      G+C Difference (%)
      2.510000000000005
      0 references
      Bullifex porci
      16S Identity %
      23.563968668407313
      POCPu
      12.052326828222174
      G+C Difference (%)
      12.290000000000006
      0 references
      Alkalispirochaeta alkalica
      16S Identity %
      23.51765489673551
      POCPu
      10.222306669200076
      G+C Difference (%)
      12.139999999999993
      0 references
      Brucepastera parasyntrophica
      16S Identity %
      23.50971198928332
      POCPu
      23.565170749150724
      G+C Difference (%)
      2.1200000000000045
      0 references
      Treponema denticola
      16S Identity %
      23.464052287581698
      POCPu
      21.42
      G+C Difference (%)
      10.220000000000006
      0 references
      Treponema maltophilum
      16S Identity %
      23.398692810457515
      POCPu
      39.00212314225053
      G+C Difference (%)
      0.2700000000000031
      0 references
      Alkalispirochaeta americana
      16S Identity %
      23.24503311258278
      POCPu
      10.54421768707483
      G+C Difference (%)
      9.449999999999996
      0 references
      Spirochaeta halophila
      16S Identity %
      23.056825604180275
      0 references
      Treponema lecithinolyticum
      16S Identity %
      22.8325612177366
      POCPu
      33.363188535602326
      G+C Difference (%)
      4.350000000000001
      0 references
      Treponema azotonutricium
      16S Identity %
      22.796554009277667
      0 references
      Treponema pedis
      16S Identity %
      22.693602693602692
      POCPu
      18.458260701142745
      G+C Difference (%)
      11.220000000000006
      0 references
      Rectinema subterraneum
      16S Identity %
      22.693602693602692
      POCPu
      13.047848813831925
      G+C Difference (%)
      4.049999999999997
      0 references
      Spirochaeta africana
      16S Identity %
      22.666666666666664
      POCPu
      10.003818251240931
      G+C Difference (%)
      9.68
      0 references
      Alkalispirochaeta sphaeroplastigenens
      16S Identity %
      22.638981915606163
      0 references
      Treponema parvum
      16S Identity %
      22.544495715227423
      POCPu
      46.10816542948038
      G+C Difference (%)
      4.1100000000000065
      0 references
      Treponema pectinovorum
      16S Identity %
      22.4934036939314
      POCPu
      38.05762081784387
      G+C Difference (%)
      10.96
      0 references
      Treponema amylovorum
      16S Identity %
      22.319034852546917
      0 references
      Pleomorphochaeta multiformis
      16S Identity %
      22.22222222222222
      0 references
      Treponema primitia
      16S Identity %
      21.53744201457919
      POCPu
      16.74544226873734
      G+C Difference (%)
      2.75
      0 references
      Treponema socranskii
      POCPu
      72.33826809977693
      ANI %
      89.7767
      G+C Difference (%)
      1.0699999999999932
      0 references
      Parasphaerochaeta coccoides
      POCPu
      12.593283582089551
      G+C Difference (%)
      2.469999999999999
      0 references
      Leadbettera azotonutricia
      POCPu
      16.300617707618397
      G+C Difference (%)
      1.7099999999999937
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH13
      Occurance
      8
      0 references
      GH6
      Occurance
      3
      0 references
      GH23
      Occurance
      4
      0 references
      GH57
      Occurance
      2
      0 references
      GH19
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH3
      Occurance
      4
      0 references
      GH77
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH63
      Occurance
      1
      0 references
      GH105
      Occurance
      3
      0 references
      GH0
      Occurance
      3
      0 references
      GH1
      Occurance
      4
      0 references
      GH43
      Occurance
      3
      0 references
      GH2
      Occurance
      1
      0 references
      GH38
      Occurance
      1
      0 references
      GH130
      Occurance
      2
      0 references
      GH73
      Occurance
      1
      0 references
      GT2
      Occurance
      15
      0 references
      GT13
      Occurance
      1
      0 references
      GT51
      Occurance
      2
      0 references
      GT35
      Occurance
      1
      0 references
      GT4
      Occurance
      18
      0 references
      GT28
      Occurance
      4
      0 references
      GT5
      Occurance
      2
      0 references
      GT30
      Occurance
      1
      0 references
      GT32
      Occurance
      1
      0 references
      GT26
      Occurance
      2
      0 references
      GT0
      Occurance
      3
      0 references
      GT104
      Occurance
      1
      0 references
      GT8
      Occurance
      2
      0 references
      CE4
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CE9
      Occurance
      2
      0 references
      CBM50
      Occurance
      16
      0 references
      CBM48
      Occurance
      5
      0 references
      CBM12
      Occurance
      1
      0 references
      CBM34
      Occurance
      1
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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