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GCA_000403475.2 (Q313852): Difference between revisions

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Property / Pathway
 
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank
 
Normal rank
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank
 
Normal rank
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / rank
 
Normal rank
Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank
 
Normal rank
Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / rank
 
Normal rank
Property / Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate / qualifier
 
Property / Pathway
 
Property / Pathway: D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P / rank
 
Normal rank
Property / Pathway: D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank
 
Normal rank
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier
 
Property / Pathway
 
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / rank
 
Normal rank
Property / Pathway: Glycogen degradation, glycogen => glucose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / rank
 
Normal rank
Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank
 
Normal rank
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP / rank
 
Normal rank
Property / Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, initiation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, initiation / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: C1-unit interconversion, prokaryotes / rank
 
Normal rank
Property / Pathway: C1-unit interconversion, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Arabinoxylan degradation / rank
 
Normal rank
Property / Pathway: Arabinoxylan degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Fructan degradation / rank
 
Normal rank
Property / Pathway: Fructan degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Lactose degradation / rank
 
Normal rank
Property / Pathway: Lactose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Melibiose degradation / rank
 
Normal rank
Property / Pathway: Melibiose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Sucrose degradation I / rank
 
Normal rank
Property / Pathway: Sucrose degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Ribose degradation / rank
 
Normal rank
Property / Pathway: Ribose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Galacturonate degradation I / rank
 
Normal rank
Property / Pathway: Galacturonate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Tyrosine degradation I / rank
 
Normal rank
Property / Pathway: Tyrosine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation I / rank
 
Normal rank
Property / Pathway: Cysteine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation I / rank
 
Normal rank
Property / Pathway: Glutamine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Serine degradation / rank
 
Normal rank
Property / Pathway: Serine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine degradation II / rank
 
Normal rank
Property / Pathway: Threonine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation V / rank
 
Normal rank
Property / Pathway: Arginine degradation V / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to acetate / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to acetate / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate production / rank
 
Normal rank
Property / Pathway: Lactate production / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 71.5
Amount71.5
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 1.29
Amount1.29
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 3.2
Amount3.2
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.72
Amount0.72
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 2.9
Amount2.9
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.44
Amount0.44
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 34
Amount34
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.78
Amount0.78
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 3.1
Amount3.1
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.39
Amount0.39
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 1.1
Amount1.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 2.1
Amount2.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.19
Amount0.19
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 4.1
Amount4.1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 12.3
Amount12.3
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 1.7
Amount1.7
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.53
Amount0.53
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 1.2
Amount1.2
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 2.47
Amount2.47
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 14.1
Amount14.1
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.49
Amount0.49
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 2.7
Amount2.7
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.17
Amount0.17
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 24.9
Amount24.9
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 1.32
Amount1.32
Unit1
Property / MAGs
 
Property / MAGs: MMGC140188.fna / rank
 
Normal rank
Property / MAGs: MMGC140188.fna / qualifier
 
Property / MAGs
 
Property / MAGs: MMGC140947.fna / rank
 
Normal rank
Property / MAGs: MMGC140947.fna / qualifier
 
Property / MAGs
 
Property / MAGs: MMGC141151.fna / rank
 
Normal rank
Property / MAGs: MMGC141151.fna / qualifier
 

Latest revision as of 07:54, 28 September 2026

genome assembly
Language Label Description Also known as
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No label defined
    English
    GCA_000403475.2
    genome assembly

      Statements

      no current description - please contribute here
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