Jump to content

GCA_002501805.1 (Q56763): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
4,471,963 edits
‎Added qualifier: Occurance (P17): 1
 
(113 intermediate revisions by the same user not shown)
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE12 / rank
 
Normal rank
Property / CAZyme: CE12 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE1 / rank
 
Normal rank
Property / CAZyme: CE1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM2 / rank
 
Normal rank
Property / CAZyme: CBM2 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM32 / rank
 
Normal rank
Property / CAZyme: CBM32 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank
 
Normal rank
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine cleavage system / rank
 
Normal rank
Property / Pathway: Glycine cleavage system / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine degradation / rank
 
Normal rank
Property / Pathway: Glycine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation I / rank
 
Normal rank
Property / Pathway: Methionine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Proline degradation / rank
 
Normal rank
Property / Pathway: Proline degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to crotonyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to crotonyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 6.8
Amount6.8
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.15
Amount0.15
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 17.1
Amount17.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.71
Amount0.71
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.3
Amount0.3
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 3.3
Amount3.3
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 17:45, 24 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_002501805.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanomassiliicoccus luminyensis
      16S Identity %
      79.09806728704366
      POCPu
      3.9893617021276597
      G+C Difference (%)
      13.75
      0 references
      Methanomethylophilus alvi
      16S Identity %
      77.77777777777779
      POCPu
      4.715969989281887
      G+C Difference (%)
      8.860000000000007
      0 references
      Methanobacterium lacus
      16S Identity %
      76.36499626028423
      POCPu
      1.8181818181818181
      G+C Difference (%)
      10.899999999999999
      0 references
      Thermogymnomonas acidicola
      16S Identity %
      76.28111273792094
      POCPu
      3.0716723549488054
      G+C Difference (%)
      9.700000000000003
      0 references
      Methanothrix harundinacea
      16S Identity %
      76.08047690014902
      POCPu
      3.0404463040446306
      G+C Difference (%)
      8.770000000000003
      0 references
      Acidiplasma aeolicum
      16S Identity %
      75.6170531039641
      POCPu
      1.983860121049092
      G+C Difference (%)
      12.75
      0 references
      Methanobacterium aarhusense
      16S Identity %
      75.5893536121673
      0 references
      Methanothermobacter marburgensis
      16S Identity %
      75.58886509635975
      POCPu
      3.091721058055651
      G+C Difference (%)
      1.9100000000000037
      0 references
      Methanothermobacter wolfei
      16S Identity %
      75.54269175108539
      0 references
      Methanothermobacter thermoflexus
      16S Identity %
      75.52346570397111
      0 references
      Methanotorris igneus
      16S Identity %
      75.5174875089222
      POCPu
      2.9145728643216082
      G+C Difference (%)
      14.43
      0 references
      Thermoplasma acidophilum
      16S Identity %
      75.5
      POCPu
      2.707647274057812
      G+C Difference (%)
      0.7399999999999949
      0 references
      Thermoplasma volcanium
      16S Identity %
      75.5
      POCPu
      2.4991074616208495
      G+C Difference (%)
      6.809999999999995
      0 references
      Methanotorris formicicus
      16S Identity %
      75.44610992148465
      POCPu
      2.785782901056676
      G+C Difference (%)
      14.29
      0 references
      Methanothermobacter thermautotrophicus
      16S Identity %
      75.3922967189729
      POCPu
      3.2247449819019414
      G+C Difference (%)
      2.8100000000000023
      0 references
      Picrophilus torridus
      16S Identity %
      75.24964336661911
      0 references
      Methanobacterium beijingense
      16S Identity %
      75.18195050946143
      0 references
      Methanobacterium flexile
      16S Identity %
      75.1808972503618
      0 references
      Methanobacterium alcaliphilum
      16S Identity %
      75.18037518037518
      POCPu
      2.221581073283324
      G+C Difference (%)
      13.329999999999998
      0 references
      Methanobacterium oryzae
      16S Identity %
      75.08947745168217
      0 references
      Halobaculum gomorrense
      16S Identity %
      75.08922198429693
      POCPu
      2.068014705882353
      G+C Difference (%)
      21.81000000000001
      0 references
      Methanobacterium petrolearium
      16S Identity %
      75.05486466715435
      POCPu
      1.9630156472261735
      G+C Difference (%)
      8.959999999999994
      0 references
      Methanobacterium paludis
      16S Identity %
      75.05345687811833
      POCPu
      1.936912008854455
      G+C Difference (%)
      11
      0 references
      Picrophilus oshimae
      16S Identity %
      75.03566333808844
      POCPu
      2.5827573663150236
      G+C Difference (%)
      10.75
      0 references
      Methanothermobacter crinale
      16S Identity %
      75.03566333808844
      0 references
      Methanolinea tarda
      16S Identity %
      75.01789549033644
      POCPu
      1.97027307293467
      G+C Difference (%)
      8.100000000000001
      0 references
      Acidiplasma cupricumulans
      16S Identity %
      75.01784439685939
      0 references
      Methanocaldococcus fervens
      16S Identity %
      74.96433666191156
      POCPu
      2.6400285408490904
      G+C Difference (%)
      14.509999999999998
      0 references
      Halomarina oriensis
      16S Identity %
      74.92877492877493
      POCPu
      1.80445590130731
      G+C Difference (%)
      20.07
      0 references
      Methanocaldococcus jannaschii
      16S Identity %
      74.91090520313614
      POCPu
      2.4342105263157894
      G+C Difference (%)
      15.439999999999998
      0 references
      Methanothermobacter defluvii
      16S Identity %
      74.87437185929649
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      74.83917083631165
      POCPu
      2.457002457002457
      G+C Difference (%)
      13.839999999999996
      0 references
      Methanoregula formicica
      16S Identity %
      74.80029048656499
      POCPu
      1.7313875834776158
      G+C Difference (%)
      8.470000000000006
      0 references
      Methanococcoides burtonii
      16S Identity %
      74.78571428571429
      POCPu
      2.3822128110111174
      G+C Difference (%)
      5.969999999999999
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      74.7323340471092
      POCPu
      2.4015369836695486
      G+C Difference (%)
      9.43
      0 references
      Methanobacterium kanagiense
      16S Identity %
      74.679029957204
      0 references
      Methanolobus halotolerans
      16S Identity %
      74.67438494934878
      POCPu
      2.60752688172043
      G+C Difference (%)
      3.1499999999999986
      0 references
      Methanocaldococcus vulcanius
      16S Identity %
      74.6077032810271
      POCPu
      2.633378932968536
      G+C Difference (%)
      15.149999999999999
      0 references
      Methanosphaerula palustris
      16S Identity %
      74.6065808297568
      POCPu
      1.6235413495687467
      G+C Difference (%)
      8.620000000000005
      0 references
      Halorarius litoreus
      16S Identity %
      74.51820128479658
      POCPu
      1.7053701015965168
      G+C Difference (%)
      19.839999999999996
      0 references
      Methermicoccus shengliensis
      16S Identity %
      74.47604790419162
      POCPu
      3.281644428416877
      G+C Difference (%)
      7.840000000000003
      0 references
      Haladaptatus pallidirubidus
      16S Identity %
      74.46504992867332
      POCPu
      1.3085052843482639
      G+C Difference (%)
      9.32
      0 references
      Methanobacterium movilense
      16S Identity %
      74.46016381236039
      0 references
      Methanothrix soehngenii
      16S Identity %
      74.37544610992148
      POCPu
      2.3509855141296603
      G+C Difference (%)
      4.260000000000005
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      74.37544610992148
      POCPu
      3.128153380423814
      G+C Difference (%)
      6.82
      0 references
      Halobacterium rubrum
      16S Identity %
      74.21652421652422
      POCPu
      2.157619804678628
      G+C Difference (%)
      21.880000000000003
      0 references
      Halorientalis regularis
      16S Identity %
      74.07407407407408
      POCPu
      1.7193048028405906
      G+C Difference (%)
      18.360000000000007
      0 references
      Halorussus halobius
      16S Identity %
      73.86039886039886
      POCPu
      2.032043767096522
      G+C Difference (%)
      20.54
      0 references
      Salarchaeum japonicum
      16S Identity %
      73.86039886039886
      POCPu
      2.507414397411701
      G+C Difference (%)
      20.770000000000003
      0 references
      Methanothermobacter wolfeii
      POCPu
      2.858092389498172
      G+C Difference (%)
      1.9400000000000048
      0 references
      CAZyme
      GH28
      Occurance
      1
      0 references
      GH101
      Occurance
      3
      0 references
      GH0
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      6
      0 references
      GT2
      Occurance
      4
      0 references
      GT1
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CE12
      Occurance
      1
      0 references
      CE1
      Occurance
      1
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM50
      Occurance
      1
      0 references
      CBM32
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q56763&oldid=537943"