GCA_002402995.1 (Q54184): Difference between revisions
Appearance
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Desulfohalotomaculum halophilum / qualifier | |||||||
16S Identity %: 74.01469605878424
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldicellulosiruptor diazotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldicellulosiruptor diazotrophicus / qualifier | |||||||
16S Identity %: 73.94317394317395
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| Property / Comparison to close relatives: Caldicellulosiruptor diazotrophicus / qualifier | |||||||
POCPu: 3.6282622533418207
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| Property / Comparison to close relatives: Caldicellulosiruptor diazotrophicus / qualifier | |||||||
G+C Difference (%): 3.240000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Dactylosporangium sucinum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Dactylosporangium sucinum / qualifier | |||||||
16S Identity %: 73.92226148409894
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| Property / Comparison to close relatives: Dactylosporangium sucinum / qualifier | |||||||
POCPu: 0.4078857919782461
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| Property / Comparison to close relatives: Dactylosporangium sucinum / qualifier | |||||||
G+C Difference (%): 34.23
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Croceifilum oryzae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Croceifilum oryzae / qualifier | |||||||
16S Identity %: 73.86124737210932
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| Property / Comparison to close relatives: Croceifilum oryzae / qualifier | |||||||
POCPu: 2.0121789780248873
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| Property / Comparison to close relatives: Croceifilum oryzae / qualifier | |||||||
G+C Difference (%): 3.6899999999999977
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Butyricicoccus intestinisimiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Butyricicoccus intestinisimiae / qualifier | |||||||
16S Identity %: 73.82352941176471
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| Property / Comparison to close relatives: Butyricicoccus intestinisimiae / qualifier | |||||||
POCPu: 2.0664869721473496
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| Property / Comparison to close relatives: Butyricicoccus intestinisimiae / qualifier | |||||||
G+C Difference (%): 12.219999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Clostridium hydrogeniformans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Clostridium hydrogeniformans / qualifier | |||||||
16S Identity %: 73.79454926624737
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| Property / Comparison to close relatives: Clostridium hydrogeniformans / qualifier | |||||||
POCPu: 2.002249718785152
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| Property / Comparison to close relatives: Clostridium hydrogeniformans / qualifier | |||||||
G+C Difference (%): 8.7
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Peptostreptococcus russellii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Peptostreptococcus russellii / qualifier | |||||||
16S Identity %: 73.79032258064517
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| Property / Comparison to close relatives: Peptostreptococcus russellii / qualifier | |||||||
POCPu: 2.7969193352249695
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| Property / Comparison to close relatives: Peptostreptococcus russellii / qualifier | |||||||
G+C Difference (%): 7.100000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methylocapsa acidiphila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methylocapsa acidiphila / qualifier | |||||||
16S Identity %: 73.6878453038674
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| Property / Comparison to close relatives: Methylocapsa acidiphila / qualifier | |||||||
POCPu: 1.0708589655958076
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| Property / Comparison to close relatives: Methylocapsa acidiphila / qualifier | |||||||
G+C Difference (%): 23.770000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Clostridium cylindrosporum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Clostridium cylindrosporum / qualifier | |||||||
16S Identity %: 73.54352296093215
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| Property / Comparison to close relatives: Clostridium cylindrosporum / qualifier | |||||||
POCPu: 2.417910447761194
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| Property / Comparison to close relatives: Clostridium cylindrosporum / qualifier | |||||||
G+C Difference (%): 6.620000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfotomaculum varum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfotomaculum varum / qualifier | |||||||
16S Identity %: 73.35164835164835
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Laceyella tengchongensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Laceyella tengchongensis / qualifier | |||||||
16S Identity %: 73.29992841803865
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| Property / Comparison to close relatives: Laceyella tengchongensis / qualifier | |||||||
POCPu: 2.28685060899826
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| Property / Comparison to close relatives: Laceyella tengchongensis / qualifier | |||||||
G+C Difference (%): 10.979999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Peptostreptococcus faecalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Peptostreptococcus faecalis / qualifier | |||||||
16S Identity %: 73.24797843665768
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| Property / Comparison to close relatives: Peptostreptococcus faecalis / qualifier | |||||||
POCPu: 2.662290299051787
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| Property / Comparison to close relatives: Peptostreptococcus faecalis / qualifier | |||||||
G+C Difference (%): 7.640000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Planobispora takensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Planobispora takensis / qualifier | |||||||
16S Identity %: 73.13848295059151
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| Property / Comparison to close relatives: Planobispora takensis / qualifier | |||||||
POCPu: 0.5556815604445453
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| Property / Comparison to close relatives: Planobispora takensis / qualifier | |||||||
G+C Difference (%): 33.85
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Laceyella sediminis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Laceyella sediminis / qualifier | |||||||
16S Identity %: 73.09039943938332
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Clostridioides difficile / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Clostridioides difficile / qualifier | |||||||
16S Identity %: 73.03448275862068
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| Property / Comparison to close relatives: Clostridioides difficile / qualifier | |||||||
POCPu: 1.8683071314650264
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| Property / Comparison to close relatives: Clostridioides difficile / qualifier | |||||||
G+C Difference (%): 9.3
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Hazenella coriacea / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Hazenella coriacea / qualifier | |||||||
16S Identity %: 73.03370786516854
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| Property / Comparison to close relatives: Hazenella coriacea / qualifier | |||||||
POCPu: 2.486728136350936
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| Property / Comparison to close relatives: Hazenella coriacea / qualifier | |||||||
G+C Difference (%): 1.3800000000000026
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Clostridium polyendosporum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Clostridium polyendosporum / qualifier | |||||||
16S Identity %: 72.9525120440468
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| Property / Comparison to close relatives: Clostridium polyendosporum / qualifier | |||||||
POCPu: 2.3891625615763545
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| Property / Comparison to close relatives: Clostridium polyendosporum / qualifier | |||||||
G+C Difference (%): 7.16
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Peptacetobacter hiranonis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Peptacetobacter hiranonis / qualifier | |||||||
16S Identity %: 72.93610911701364
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| Property / Comparison to close relatives: Peptacetobacter hiranonis / qualifier | |||||||
POCPu: 2.6779661016949152
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| Property / Comparison to close relatives: Peptacetobacter hiranonis / qualifier | |||||||
G+C Difference (%): 6.789999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methylocystis bryophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methylocystis bryophila / qualifier | |||||||
16S Identity %: 72.91228070175438
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| Property / Comparison to close relatives: Methylocystis bryophila / qualifier | |||||||
POCPu: 0.9861932938856016
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| Property / Comparison to close relatives: Methylocystis bryophila / qualifier | |||||||
G+C Difference (%): 25.130000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Edaphobacter dinghuensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Edaphobacter dinghuensis / qualifier | |||||||
16S Identity %: 72.55304585900069
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| Property / Comparison to close relatives: Edaphobacter dinghuensis / qualifier | |||||||
POCPu: 1.2387387387387387
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| Property / Comparison to close relatives: Edaphobacter dinghuensis / qualifier | |||||||
G+C Difference (%): 18.86
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoflavimicrobium daqui / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoflavimicrobium daqui / qualifier | |||||||
16S Identity %: 72.5201072386059
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| Property / Comparison to close relatives: Thermoflavimicrobium daqui / qualifier | |||||||
POCPu: 2.2338403041825097
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| Property / Comparison to close relatives: Thermoflavimicrobium daqui / qualifier | |||||||
G+C Difference (%): 0.25
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Risungbinella pyongyangensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Risungbinella pyongyangensis / qualifier | |||||||
16S Identity %: 72.43090007087172
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Reyranella soli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Reyranella soli / qualifier | |||||||
16S Identity %: 72.38962859145059
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| Property / Comparison to close relatives: Reyranella soli / qualifier | |||||||
POCPu: 0.42781812754949755
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| Property / Comparison to close relatives: Reyranella soli / qualifier | |||||||
G+C Difference (%): 27.660000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Rhodovarius lipocyclicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Rhodovarius lipocyclicus / qualifier | |||||||
16S Identity %: 72.18406593406593
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| Property / Comparison to close relatives: Rhodovarius lipocyclicus / qualifier | |||||||
POCPu: 0.8750994431185362
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| Property / Comparison to close relatives: Rhodovarius lipocyclicus / qualifier | |||||||
G+C Difference (%): 31.779999999999994
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Brassicibacter mesophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Brassicibacter mesophilus / qualifier | |||||||
16S Identity %: 71.875
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH2 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 15
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| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 10
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
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| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.7
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.01
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 10:59, 24 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_002402995.1 |
genome assembly |
Statements
no current description - please contribute here
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