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‎Added qualifier: Relative abundance (%) (P19): 0.08
 
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Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 5.8
Amount5.8
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 23.6
Amount23.6
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 2.68
Amount2.68
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 25
Amount25
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 1.09
Amount1.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 2
Amount2
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.49
Amount0.49
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 7.8
Amount7.8
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 13.7
Amount13.7
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.6
Amount0.6
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 54.1
Amount54.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.56
Amount0.56
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 14.4
Amount14.4
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.16
Amount0.16
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 5.3
Amount5.3
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 7.19
Amount7.19
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 3.3
Amount3.3
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 6.4
Amount6.4
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.28
Amount0.28
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 3.3
Amount3.3
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.33
Amount0.33
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 18:41, 15 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000026125.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Herminiimonas arsenicoxydans
      16S Identity %
      100
      POCPu
      99.81600735970562
      ANI %
      100
      G+C Difference (%)
      0
      0 references
      Herminiimonas saxobsidens
      16S Identity %
      98.93617021276596
      0 references
      Herminiimonas contaminans
      16S Identity %
      98.75173370319001
      POCPu
      69.74221721369207
      ANI %
      80.9864
      G+C Difference (%)
      0.3999999999999986
      0 references
      Herminiimonas glaciei
      16S Identity %
      98.67503486750348
      0 references
      Herminiimonas fonticola
      16S Identity %
      98.58585858585859
      POCPu
      77.5670898280572
      ANI %
      83.6132
      G+C Difference (%)
      2.6999999999999957
      0 references
      Herminiimonas aquatilis
      16S Identity %
      98.56115107913669
      0 references
      Janthinobacterium agaricidamnosum
      16S Identity %
      97.2313777191826
      POCPu
      39.30360124016217
      ANI %
      77.9443
      G+C Difference (%)
      6.759999999999998
      0 references
      Oxalicibacterium solurbis
      16S Identity %
      96.84499314128944
      POCPu
      69.12344057780696
      ANI %
      79.7233
      G+C Difference (%)
      4.770000000000003
      0 references
      Janthinobacterium violaceinigrum
      16S Identity %
      96.78499665103818
      POCPu
      38.293785310734464
      ANI %
      77.7821
      G+C Difference (%)
      9.14
      0 references
      Aquaspirillum arcticum
      16S Identity %
      96.76985195154778
      0 references
      Herbaspirillum frisingense
      16S Identity %
      96.72988881621976
      POCPu
      40.86698777324935
      ANI %
      77.3987
      G+C Difference (%)
      8.730000000000004
      0 references
      Duganella albus
      16S Identity %
      96.72240802675586
      0 references
      Herbaspirillum autotrophicum
      16S Identity %
      96.70920080591002
      POCPu
      40.62572421784473
      ANI %
      78.4526
      G+C Difference (%)
      3.6600000000000037
      0 references
      Herbaspirillum aquaticum
      16S Identity %
      96.70103092783505
      POCPu
      41.04153750774954
      ANI %
      77.5857
      G+C Difference (%)
      8.439999999999998
      0 references
      Herbaspirillum rubrisubalbicans
      16S Identity %
      96.70033670033669
      POCPu
      40.32119651832782
      ANI %
      77.6012
      G+C Difference (%)
      7.210000000000001
      0 references
      Janthinobacterium lividum
      16S Identity %
      96.6643975493533
      POCPu
      37.54285082384165
      ANI %
      77.6759
      G+C Difference (%)
      8.090000000000003
      0 references
      Janthinobacterium aquaticum
      16S Identity %
      96.65551839464884
      0 references
      Herbaspirillum lusitanum
      16S Identity %
      96.65354330708661
      POCPu
      42.46558197747184
      ANI %
      78.358
      G+C Difference (%)
      5.969999999999999
      0 references
      Herbaspirillum rhizosphaerae
      16S Identity %
      96.57258064516128
      POCPu
      42.6661621894312
      ANI %
      78.663
      G+C Difference (%)
      5.829999999999998
      0 references
      Herbaspirillum hiltneri
      16S Identity %
      96.54939106901217
      POCPu
      44.435787560057136
      ANI %
      78.4361
      G+C Difference (%)
      6.469999999999999
      0 references
      Collimonas silvisoli
      16S Identity %
      96.52638610554443
      POCPu
      40.69155300311079
      ANI %
      78.6022
      G+C Difference (%)
      2.8200000000000003
      0 references
      Collimonas humicola
      16S Identity %
      96.52638610554443
      POCPu
      40.32972440944882
      ANI %
      78.6579
      G+C Difference (%)
      5.109999999999999
      0 references
      Janthinobacterium rivuli
      16S Identity %
      96.52173913043478
      POCPu
      38.36905977089713
      ANI %
      77.8378
      G+C Difference (%)
      8.310000000000002
      0 references
      Rugamonas aquatica
      16S Identity %
      96.51707970529137
      POCPu
      35.5557870611522
      ANI %
      77.4718
      G+C Difference (%)
      9.490000000000002
      0 references
      Glaciimonas singularis
      16S Identity %
      96.47840531561461
      0 references
      Oxalicibacterium horti
      16S Identity %
      96.43097643097643
      0 references
      Herbaspirillum chlorophenolicum
      16S Identity %
      96.33649932157394
      POCPu
      43.8685208596713
      ANI %
      78.0486
      G+C Difference (%)
      6.939999999999998
      0 references
      Herbaspirillum seropedicae
      16S Identity %
      96.3302752293578
      POCPu
      41.31953105512597
      ANI %
      77.5562
      G+C Difference (%)
      9.11
      0 references
      Rugamonas fusca
      16S Identity %
      96.31614199598124
      POCPu
      40.698931187702655
      ANI %
      77.45
      G+C Difference (%)
      10.949999999999996
      0 references
      Rugamonas brunnea
      16S Identity %
      96.31614199598124
      POCPu
      41.27197265625
      ANI %
      77.5523
      G+C Difference (%)
      11.29
      0 references
      Undibacterium rivi
      16S Identity %
      96.31367292225201
      POCPu
      46.23480581085088
      G+C Difference (%)
      4.339999999999996
      0 references
      Massilia antarctica
      16S Identity %
      96.26229508196721
      POCPu
      34.97542098106893
      ANI %
      77.8899
      G+C Difference (%)
      9.490000000000002
      0 references
      Rugamonas rivuli
      16S Identity %
      96.24916275954453
      POCPu
      37.03421224667684
      ANI %
      77.6425
      G+C Difference (%)
      9.619999999999997
      0 references
      Undibacterium terreum
      16S Identity %
      96.24413145539906
      POCPu
      39.44289693593315
      ANI %
      77.5582
      G+C Difference (%)
      0.5300000000000011
      0 references
      Massilia atriviolacea
      16S Identity %
      96.24161073825503
      POCPu
      35.36533559898046
      ANI %
      77.6395
      G+C Difference (%)
      11.07
      0 references
      Massilia violaceinigra
      16S Identity %
      96.19672131147541
      POCPu
      33.295253920448644
      ANI %
      78.0773
      G+C Difference (%)
      9.18
      0 references
      Undibacterium nitidum
      16S Identity %
      96.19238476953907
      POCPu
      39.32632177373508
      G+C Difference (%)
      7.369999999999997
      0 references
      Duganella fentianensis
      16S Identity %
      96.18729096989966
      POCPu
      41.98292843072882
      ANI %
      77.4928
      G+C Difference (%)
      6.640000000000001
      0 references
      Herbaspirillum huttiense subsp. putei
      16S Identity %
      96.17962466487936
      0 references
      Massilia frigida
      16S Identity %
      96.17414248021107
      POCPu
      33.5561632735744
      ANI %
      77.6731
      G+C Difference (%)
      9.39
      0 references
      Massilia rubra
      16S Identity %
      96.11074489123268
      POCPu
      34.17335636622295
      ANI %
      77.4083
      G+C Difference (%)
      9.509999999999998
      0 references
      Massilia mucilaginosa
      16S Identity %
      96.11074489123268
      POCPu
      33.82145021207837
      ANI %
      77.6305
      G+C Difference (%)
      9.869999999999997
      0 references
      Glaciimonas immobilis
      16S Identity %
      95.79776756401839
      POCPu
      41.2079311244456
      G+C Difference (%)
      3.4299999999999997
      0 references
      Noviherbaspirillum aurantiacum
      16S Identity %
      95.67213114754098
      0 references
      Massilia armeniaca
      16S Identity %
      95.61231172233137
      0 references
      Massilia oculi
      16S Identity %
      95.61231172233137
      POCPu
      39.09415971394517
      G+C Difference (%)
      11.259999999999998
      0 references
      Noviherbaspirillum canariense
      16S Identity %
      95.54098360655738
      0 references
      Noviherbaspirillum soli
      16S Identity %
      95.54098360655738
      POCPu
      44.94244428116581
      ANI %
      77.587
      G+C Difference (%)
      8.240000000000002
      0 references
      Glaciimonas alpina
      16S Identity %
      95.46946815495733
      0 references
      Herbaspirillum huttiense
      POCPu
      41.17719797205391
      ANI %
      77.6449
      G+C Difference (%)
      8.54
      0 references
      Duganella alba
      POCPu
      37.389652475136884
      ANI %
      77.6236
      G+C Difference (%)
      9.68
      0 references
      Pseudoduganella armeniaca
      POCPu
      37.4857922255058
      ANI %
      77.4452
      G+C Difference (%)
      12.050000000000004
      0 references
      CAZyme
      GH94
      Occurance
      1
      0 references
      GH13
      Occurance
      2
      0 references
      GH6
      Occurance
      2
      0 references
      GH23
      Occurance
      8
      0 references
      GH28
      Occurance
      1
      0 references
      GH73
      Occurance
      2
      0 references
      GH102
      Occurance
      1
      0 references
      GH135
      Occurance
      1
      0 references
      GH103
      Occurance
      1
      0 references
      GH0
      Occurance
      4
      0 references
      GH3
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH43
      Occurance
      1
      0 references
      GH24
      Occurance
      1
      0 references
      GT84
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT2
      Occurance
      34
      0 references
      GT51
      Occurance
      4
      0 references
      GT4
      Occurance
      21
      0 references
      GT0
      Occurance
      7
      0 references
      GT22
      Occurance
      1
      0 references
      GT1
      Occurance
      3
      0 references
      GT83
      Occurance
      1
      0 references
      GT28
      Occurance
      4
      0 references
      GT32
      Occurance
      1
      0 references
      GT30
      Occurance
      2
      0 references
      GT26
      Occurance
      2
      0 references
      GT104
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      CE11
      Occurance
      2
      0 references
      CE4
      Occurance
      1
      0 references
      CBM20
      Occurance
      2
      0 references
      CBM41
      Occurance
      7
      0 references
      CBM50
      Occurance
      24
      0 references
      CBM13
      Occurance
      3
      0 references
      CBM5
      Occurance
      2
      0 references
      CBM32
      Occurance
      1
      0 references
      CBM6
      Occurance
      2
      0 references
      CBM48
      Occurance
      2
      0 references
      Pathway
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
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