GCA_002382075.1 (Q53468): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 1.11155220325526 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (177 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Campylobacter subantarcticus / qualifier | |||||||
G+C Difference (%): 8.21
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Frigoribacterium endophyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Frigoribacterium endophyticum / qualifier | |||||||
16S Identity %: 24.31674842326559
| |||||||
| Property / Comparison to close relatives: Frigoribacterium endophyticum / qualifier | |||||||
POCPu: 0.7581911724884917
| |||||||
| Property / Comparison to close relatives: Frigoribacterium endophyticum / qualifier | |||||||
G+C Difference (%): 35.35999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bdellovibrio reynosensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bdellovibrio reynosensis / qualifier | |||||||
16S Identity %: 24.22316384180791
| |||||||
| Property / Comparison to close relatives: Bdellovibrio reynosensis / qualifier | |||||||
POCPu: 0.8278976417461115
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| Property / Comparison to close relatives: Bdellovibrio reynosensis / qualifier | |||||||
G+C Difference (%): 5.159999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Wolinella succinogenes / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Wolinella succinogenes / qualifier | |||||||
16S Identity %: 24.208304011259678
| |||||||
| Property / Comparison to close relatives: Wolinella succinogenes / qualifier | |||||||
POCPu: 0.804976216611782
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| Property / Comparison to close relatives: Wolinella succinogenes / qualifier | |||||||
G+C Difference (%): 10.5
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides simplex / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides simplex / qualifier | |||||||
16S Identity %: 24.20289855072464
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bifidobacterium crudilactis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bifidobacterium crudilactis / qualifier | |||||||
16S Identity %: 24.15603900975244
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bifidobacterium aquikefiri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bifidobacterium aquikefiri / qualifier | |||||||
16S Identity %: 24.103299856527975
| |||||||
| Property / Comparison to close relatives: Bifidobacterium aquikefiri / qualifier | |||||||
POCPu: 1.0922787193973633
| |||||||
| Property / Comparison to close relatives: Bifidobacterium aquikefiri / qualifier | |||||||
G+C Difference (%): 14.329999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides caeni / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides caeni / qualifier | |||||||
16S Identity %: 24.100719424460433
| |||||||
| Property / Comparison to close relatives: Nocardioides caeni / qualifier | |||||||
POCPu: 0.7296042449701525
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| Property / Comparison to close relatives: Nocardioides caeni / qualifier | |||||||
G+C Difference (%): 33.220000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Campylobacter ornithocola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Campylobacter ornithocola / qualifier | |||||||
16S Identity %: 24.014084507042256
| |||||||
| Property / Comparison to close relatives: Campylobacter ornithocola / qualifier | |||||||
POCPu: 1.2747252747252749
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| Property / Comparison to close relatives: Campylobacter ornithocola / qualifier | |||||||
G+C Difference (%): 8.740000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pseudoclavibacter endophyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pseudoclavibacter endophyticus / qualifier | |||||||
16S Identity %: 23.963457484188336
| |||||||
| Property / Comparison to close relatives: Pseudoclavibacter endophyticus / qualifier | |||||||
POCPu: 0.7905138339920948
| |||||||
| Property / Comparison to close relatives: Pseudoclavibacter endophyticus / qualifier | |||||||
G+C Difference (%): 31.6
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aeromicrobium lacus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aeromicrobium lacus / qualifier | |||||||
16S Identity %: 23.931623931623932
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Demequina oxidasica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Demequina oxidasica / qualifier | |||||||
16S Identity %: 23.86039886039886
| |||||||
| Property / Comparison to close relatives: Demequina oxidasica / qualifier | |||||||
POCPu: 0.855263157894737
| |||||||
| Property / Comparison to close relatives: Demequina oxidasica / qualifier | |||||||
G+C Difference (%): 26.089999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bifidobacterium psychraerophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bifidobacterium psychraerophilum / qualifier | |||||||
16S Identity %: 23.646723646723647
| |||||||
| Property / Comparison to close relatives: Bifidobacterium psychraerophilum / qualifier | |||||||
POCPu: 1.2513407222023596
| |||||||
| Property / Comparison to close relatives: Bifidobacterium psychraerophilum / qualifier | |||||||
G+C Difference (%): 20.79
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides faecalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides faecalis / qualifier | |||||||
16S Identity %: 23.347398030942333
| |||||||
| Property / Comparison to close relatives: Nocardioides faecalis / qualifier | |||||||
POCPu: 0.7132667617689016
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| Property / Comparison to close relatives: Nocardioides faecalis / qualifier | |||||||
G+C Difference (%): 34.23
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides albidus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides albidus / qualifier | |||||||
16S Identity %: 23.27773749093546
| |||||||
| Property / Comparison to close relatives: Nocardioides albidus / qualifier | |||||||
POCPu: 0.7113821138211381
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| Property / Comparison to close relatives: Nocardioides albidus / qualifier | |||||||
G+C Difference (%): 33.65
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides montaniterrae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides montaniterrae / qualifier | |||||||
16S Identity %: 23.19148936170213
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Glaciihabitans tibetensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Glaciihabitans tibetensis / qualifier | |||||||
16S Identity %: 22.97962052002811
| |||||||
| Property / Comparison to close relatives: Glaciihabitans tibetensis / qualifier | |||||||
POCPu: 0.8017492711370262
| |||||||
| Property / Comparison to close relatives: Glaciihabitans tibetensis / qualifier | |||||||
G+C Difference (%): 27.479999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Tetrasphaera australiensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Tetrasphaera australiensis / qualifier | |||||||
16S Identity %: 22.96243798724309
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides daeguensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides daeguensis / qualifier | |||||||
16S Identity %: 22.88447387785136
| |||||||
| Property / Comparison to close relatives: Nocardioides daeguensis / qualifier | |||||||
POCPu: 0.5900865460267506
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| Property / Comparison to close relatives: Nocardioides daeguensis / qualifier | |||||||
G+C Difference (%): 34.050000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nocardioides cavernaquae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nocardioides cavernaquae / qualifier | |||||||
16S Identity %: 22.861150070126225
| |||||||
| Property / Comparison to close relatives: Nocardioides cavernaquae / qualifier | |||||||
POCPu: 0.8564231738035265
| |||||||
| Property / Comparison to close relatives: Nocardioides cavernaquae / qualifier | |||||||
G+C Difference (%): 31.410000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kribbella catacumbae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kribbella catacumbae / qualifier | |||||||
16S Identity %: 22.839072382290933
| |||||||
| Property / Comparison to close relatives: Kribbella catacumbae / qualifier | |||||||
POCPu: 0.3351487222454964
| |||||||
| Property / Comparison to close relatives: Kribbella catacumbae / qualifier | |||||||
G+C Difference (%): 29.54
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kribbella antibiotica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kribbella antibiotica / qualifier | |||||||
16S Identity %: 22.736842105263158
| |||||||
| Property / Comparison to close relatives: Kribbella antibiotica / qualifier | |||||||
POCPu: 0.3731343283582089
| |||||||
| Property / Comparison to close relatives: Kribbella antibiotica / qualifier | |||||||
G+C Difference (%): 28.990000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kribbella ginsengisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kribbella ginsengisoli / qualifier | |||||||
16S Identity %: 22.542134831460675
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kribbella qitaiheensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kribbella qitaiheensis / qualifier | |||||||
16S Identity %: 22.51935256861365
| |||||||
| Property / Comparison to close relatives: Kribbella qitaiheensis / qualifier | |||||||
POCPu: 0.39896737854963626
| |||||||
| Property / Comparison to close relatives: Kribbella qitaiheensis / qualifier | |||||||
G+C Difference (%): 29.470000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kribbella sandramycini / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kribbella sandramycini / qualifier | |||||||
16S Identity %: 22.464788732394368
| |||||||
| Property / Comparison to close relatives: Kribbella sandramycini / qualifier | |||||||
POCPu: 0.38290513833992096
| |||||||
| Property / Comparison to close relatives: Kribbella sandramycini / qualifier | |||||||
G+C Difference (%): 31.199999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nostocoides australiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nostocoides australiense / qualifier | |||||||
POCPu: 0.6172839506172839
| |||||||
| Property / Comparison to close relatives: Nostocoides australiense / qualifier | |||||||
G+C Difference (%): 30.190000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Campylobacter lari / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Campylobacter lari / qualifier | |||||||
POCPu: 1.2903225806451613
| |||||||
| Property / Comparison to close relatives: Campylobacter lari / qualifier | |||||||
G+C Difference (%): 8.16
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pimelobacter simplex / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pimelobacter simplex / qualifier | |||||||
POCPu: 0.5012126111560227
| |||||||
| Property / Comparison to close relatives: Pimelobacter simplex / qualifier | |||||||
G+C Difference (%): 34.88999999999999
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH130 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH130 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 18
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 8
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT75 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT75 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 1.3
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 08:30, 24 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_002382075.1 |
genome assembly |
Statements
no current description - please contribute here
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0.6172839506172839
30.190000000000005
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