GCA_002378745.1 (Q53403): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 0.5891683661907999 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (173 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Bradyrhizobium mercantei / qualifier | |||||||
G+C Difference (%): 17.090000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aurantimonas coralicida / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aurantimonas coralicida / qualifier | |||||||
16S Identity %: 25
| |||||||
| Property / Comparison to close relatives: Aurantimonas coralicida / qualifier | |||||||
POCPu: 0.9914733293674401
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| Property / Comparison to close relatives: Aurantimonas coralicida / qualifier | |||||||
G+C Difference (%): 19.82
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Campylobacter ureolyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Campylobacter ureolyticus / qualifier | |||||||
16S Identity %: 24.983119513842
| |||||||
| Property / Comparison to close relatives: Campylobacter ureolyticus / qualifier | |||||||
POCPu: 1.6205533596837944
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| Property / Comparison to close relatives: Campylobacter ureolyticus / qualifier | |||||||
G+C Difference (%): 17.91
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bradyrhizobium kavangense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bradyrhizobium kavangense / qualifier | |||||||
16S Identity %: 24.981844589687725
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halospirulina tapeticola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halospirulina tapeticola / qualifier | |||||||
16S Identity %: 24.68354430379747
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pelovirga terrestris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pelovirga terrestris / qualifier | |||||||
16S Identity %: 24.628879892037787
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| Property / Comparison to close relatives: Pelovirga terrestris / qualifier | |||||||
POCPu: 1.5991177281499864
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| Property / Comparison to close relatives: Pelovirga terrestris / qualifier | |||||||
G+C Difference (%): 6.170000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfovectis peckii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfovectis peckii / qualifier | |||||||
16S Identity %: 24.612272420768715
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Periweissella ghanensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Periweissella ghanensis / qualifier | |||||||
16S Identity %: 24.467353951890033
| |||||||
| Property / Comparison to close relatives: Periweissella ghanensis / qualifier | |||||||
POCPu: 2.3666416228399703
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| Property / Comparison to close relatives: Periweissella ghanensis / qualifier | |||||||
G+C Difference (%): 7.339999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Loriellopsis cavernicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Loriellopsis cavernicola / qualifier | |||||||
16S Identity %: 24.40677966101695
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Periweissella fabaria / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Periweissella fabaria / qualifier | |||||||
16S Identity %: 24.292615596963422
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| Property / Comparison to close relatives: Periweissella fabaria / qualifier | |||||||
POCPu: 2.3344814389590507
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| Property / Comparison to close relatives: Periweissella fabaria / qualifier | |||||||
G+C Difference (%): 8.829999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Lentilactobacillus hilgardii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Lentilactobacillus hilgardii / qualifier | |||||||
16S Identity %: 24.137931034482758
| |||||||
| Property / Comparison to close relatives: Lentilactobacillus hilgardii / qualifier | |||||||
POCPu: 1.8574908647990256
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| Property / Comparison to close relatives: Lentilactobacillus hilgardii / qualifier | |||||||
G+C Difference (%): 8.729999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Periweissella beninensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Periweissella beninensis / qualifier | |||||||
16S Identity %: 23.825966850828728
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| Property / Comparison to close relatives: Periweissella beninensis / qualifier | |||||||
POCPu: 2.279088364654138
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| Property / Comparison to close relatives: Periweissella beninensis / qualifier | |||||||
G+C Difference (%): 11.46
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Dichotomicrobium thermohalophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Dichotomicrobium thermohalophilum / qualifier | |||||||
16S Identity %: 23.521505376344088
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| Property / Comparison to close relatives: Dichotomicrobium thermohalophilum / qualifier | |||||||
POCPu: 1.228220508426164
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| Property / Comparison to close relatives: Dichotomicrobium thermohalophilum / qualifier | |||||||
G+C Difference (%): 17.390000000000008
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Campylobacter gracilis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Campylobacter gracilis / qualifier | |||||||
16S Identity %: 23.360353721444362
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| Property / Comparison to close relatives: Campylobacter gracilis / qualifier | |||||||
POCPu: 1.5003489183531054
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| Property / Comparison to close relatives: Campylobacter gracilis / qualifier | |||||||
G+C Difference (%): 0.3399999999999963
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Roseitalea porphyridii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Roseitalea porphyridii / qualifier | |||||||
16S Identity %: 23.289564616447823
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| Property / Comparison to close relatives: Roseitalea porphyridii / qualifier | |||||||
POCPu: 1.3275404296403572
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| Property / Comparison to close relatives: Roseitalea porphyridii / qualifier | |||||||
G+C Difference (%): 19.660000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pseudemcibacter aquimaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pseudemcibacter aquimaris / qualifier | |||||||
16S Identity %: 23.288590604026847
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| Property / Comparison to close relatives: Pseudemcibacter aquimaris / qualifier | |||||||
POCPu: 1.5269151138716357
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| Property / Comparison to close relatives: Pseudemcibacter aquimaris / qualifier | |||||||
G+C Difference (%): 4.149999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Mariniblastus fucicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Mariniblastus fucicola / qualifier | |||||||
16S Identity %: 23.12971859986273
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| Property / Comparison to close relatives: Mariniblastus fucicola / qualifier | |||||||
POCPu: 0.8171603677221655
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| Property / Comparison to close relatives: Mariniblastus fucicola / qualifier | |||||||
G+C Difference (%): 6.509999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thioreductor micantisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thioreductor micantisoli / qualifier | |||||||
16S Identity %: 23.103688239387612
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aurantimonas marianensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aurantimonas marianensis / qualifier | |||||||
16S Identity %: 23.082099596231494
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| Property / Comparison to close relatives: Aurantimonas marianensis / qualifier | |||||||
POCPu: 1.1159189250740151
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| Property / Comparison to close relatives: Aurantimonas marianensis / qualifier | |||||||
G+C Difference (%): 17.869999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoflavimicrobium daqui / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoflavimicrobium daqui / qualifier | |||||||
16S Identity %: 22.978436657681943
| |||||||
| Property / Comparison to close relatives: Thermoflavimicrobium daqui / qualifier | |||||||
POCPu: 1.8448438978240302
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| Property / Comparison to close relatives: Thermoflavimicrobium daqui / qualifier | |||||||
G+C Difference (%): 9.079999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Prochlorococcus marinus subsp. pastoris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Prochlorococcus marinus subsp. pastoris / qualifier | |||||||
16S Identity %: 22.807017543859647
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Prochlorococcus marinus subsp. marinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Prochlorococcus marinus subsp. marinus / qualifier | |||||||
16S Identity %: 22.672064777327936
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Campylobacter troglodytis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Campylobacter troglodytis / qualifier | |||||||
16S Identity %: 22.48803827751196
| |||||||
| Property / Comparison to close relatives: Campylobacter troglodytis / qualifier | |||||||
POCPu: 1.1560693641618496
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| Property / Comparison to close relatives: Campylobacter troglodytis / qualifier | |||||||
G+C Difference (%): 11.699999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Mangrovicella endophytica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Mangrovicella endophytica / qualifier | |||||||
16S Identity %: 22.176591375770023
| |||||||
| Property / Comparison to close relatives: Mangrovicella endophytica / qualifier | |||||||
POCPu: 1.1057792614229085
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| Property / Comparison to close relatives: Mangrovicella endophytica / qualifier | |||||||
G+C Difference (%): 19.640000000000008
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Campylobacter avium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Campylobacter avium / qualifier | |||||||
16S Identity %: 21.584302325581394
| |||||||
| Property / Comparison to close relatives: Campylobacter avium / qualifier | |||||||
POCPu: 1.4592622618565059
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| Property / Comparison to close relatives: Campylobacter avium / qualifier | |||||||
G+C Difference (%): 12.729999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrobacter winogradskyi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrobacter winogradskyi / qualifier | |||||||
16S Identity %: 21.42377434519812
| |||||||
| Property / Comparison to close relatives: Nitrobacter winogradskyi / qualifier | |||||||
POCPu: 1.1275369581558508
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| Property / Comparison to close relatives: Nitrobacter winogradskyi / qualifier | |||||||
G+C Difference (%): 15.149999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Aurantimonas manganoxydans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Aurantimonas manganoxydans / qualifier | |||||||
POCPu: 1.118615449556775
| |||||||
| Property / Comparison to close relatives: Aurantimonas manganoxydans / qualifier | |||||||
G+C Difference (%): 19.82
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT11 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
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| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0.1
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0.18
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0.5
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0.2
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.3
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 08:17, 24 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_002378745.1 |
genome assembly |
Statements
no current description - please contribute here
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