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‎Added qualifier: Prevalence (%) (P18): 0.5
‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(27 intermediate revisions by the same user not shown)
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 5.8
Amount5.8
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 1.47
Amount1.47
Unit1
Property / MAGs
 
Property / MAGs: GCA_002365175.1_ASM236517v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002365175.1_ASM236517v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_002403435.1_ASM240343v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002403435.1_ASM240343v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_002499995.1_ASM249999v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002499995.1_ASM249999v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_002413005.1_ASM241300v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002413005.1_ASM241300v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_002298295.1_ASM229829v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002298295.1_ASM229829v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_002403465.1_ASM240346v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002403465.1_ASM240346v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300011927_3.fna / rank
 
Normal rank
Property / MAGs: 3300011927_3.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300029929_1.fna / rank
 
Normal rank
Property / MAGs: 3300029929_1.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300029941_1.fna / rank
 
Normal rank
Property / MAGs: 3300029941_1.fna / qualifier
 

Latest revision as of 07:05, 24 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_002365175.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Phreatobacter cathodiphilus
      16S Identity %
      94.141689373297
      POCPu
      38.948393378773126
      G+C Difference (%)
      8.310000000000002
      0 references
      Phreatobacter oligotrophus
      16S Identity %
      93.79457917261055
      POCPu
      38.32534611288605
      G+C Difference (%)
      7.219999999999999
      0 references
      Rhabdaerophilum calidifontis
      16S Identity %
      93.47975291695263
      POCPu
      41.82384495587472
      G+C Difference (%)
      7.320000000000007
      0 references
      Phreatobacter stygius
      16S Identity %
      93.07420494699646
      POCPu
      31.243023845763574
      G+C Difference (%)
      5.769999999999996
      0 references
      Methylocapsa acidiphila
      16S Identity %
      92.88645690834473
      POCPu
      28.994082840236686
      G+C Difference (%)
      0.9000000000000057
      0 references
      Alsobacter metallidurans
      16S Identity %
      92.67624914442163
      POCPu
      36.88298012373305
      G+C Difference (%)
      6.700000000000003
      0 references
      Brucella anthropi
      16S Identity %
      92.26069246435846
      POCPu
      25.836173166729775
      G+C Difference (%)
      4.809999999999995
      0 references
      Starkeya nomas
      16S Identity %
      92.15686274509804
      0 references
      Ancylobacter moscoviensis
      16S Identity %
      92.15686274509804
      POCPu
      33.308594329820394
      G+C Difference (%)
      7.25
      0 references
      Brucella cytisi
      16S Identity %
      92.12491513917176
      POCPu
      25.30396051522812
      G+C Difference (%)
      5.419999999999995
      0 references
      Ancylobacter novellus
      16S Identity %
      92.10884353741497
      POCPu
      31.88640973630832
      G+C Difference (%)
      6.939999999999998
      0 references
      Ancylobacter oerskovii
      16S Identity %
      92.10164835164835
      POCPu
      29.701230228471005
      G+C Difference (%)
      7.240000000000009
      0 references
      Methyloferula stellata
      16S Identity %
      92.0656634746922
      POCPu
      28.775927548933684
      G+C Difference (%)
      1.3999999999999986
      0 references
      Brucella lupini
      16S Identity %
      92.06241519674356
      0 references
      Pseudolabrys taiwanensis
      16S Identity %
      91.9431279620853
      POCPu
      31.446694315686752
      G+C Difference (%)
      3.450000000000003
      0 references
      Rhodoplanes tepidamans
      16S Identity %
      91.92672998643148
      POCPu
      27.964974506761248
      G+C Difference (%)
      10.159999999999997
      0 references
      Afipia felis
      16S Identity %
      91.76310415248469
      POCPu
      32.35632183908046
      G+C Difference (%)
      0.29999999999999716
      0 references
      Brucella intermedia
      16S Identity %
      91.72413793103448
      POCPu
      27.413954734163653
      G+C Difference (%)
      3.1999999999999957
      0 references
      Ancylobacter gelatini
      16S Identity %
      91.63208852005532
      POCPu
      33.33333333333333
      G+C Difference (%)
      6.25
      0 references
      Brucella melitensis
      16S Identity %
      91.6159567275186
      POCPu
      31.360263808738665
      G+C Difference (%)
      3.719999999999999
      0 references
      Brucella microti
      16S Identity %
      91.6159567275186
      0 references
      Bradyrhizobium lupini
      16S Identity %
      91.57608695652173
      POCPu
      25.891093764694816
      G+C Difference (%)
      2.4299999999999997
      0 references
      Bosea thiooxidans
      16S Identity %
      91.57534246575342
      POCPu
      34.96863237139272
      G+C Difference (%)
      6.439999999999998
      0 references
      Microvirga lenta
      16S Identity %
      91.48073022312373
      POCPu
      34.49424170944915
      G+C Difference (%)
      4.1200000000000045
      0 references
      Rhizobium metallidurans
      16S Identity %
      91.44021739130434
      POCPu
      24.961773700305812
      G+C Difference (%)
      1.3599999999999994
      0 references
      Pleomorphomonas oryzae
      16S Identity %
      91.43835616438356
      POCPu
      25.959426282465436
      G+C Difference (%)
      2.0500000000000043
      0 references
      Ancylobacter radicis
      16S Identity %
      91.42857142857143
      POCPu
      33.883810085520494
      G+C Difference (%)
      6.390000000000001
      0 references
      Methylosinus trichosporium
      16S Identity %
      91.4131169709263
      POCPu
      24.767029793936214
      G+C Difference (%)
      4.8500000000000085
      0 references
      Bosea minatitlanensis
      16S Identity %
      91.40148950575491
      POCPu
      35.10308583748821
      G+C Difference (%)
      7.650000000000006
      0 references
      Alsobacter ponti
      16S Identity %
      91.39710942876806
      POCPu
      37.04013377926421
      G+C Difference (%)
      8.939999999999998
      0 references
      Rhizobium pisi
      16S Identity %
      91.38398914518318
      POCPu
      22.481533026442566
      G+C Difference (%)
      0.03999999999999915
      0 references
      Brucella vulpis
      16S Identity %
      91.35466303607896
      0 references
      Rhizobium anhuiense
      16S Identity %
      91.34877384196184
      POCPu
      22.245387261544877
      G+C Difference (%)
      0.19000000000000483
      0 references
      Rhizobium ruizarguesonis
      16S Identity %
      91.34877384196184
      POCPu
      20.896102633880844
      G+C Difference (%)
      0.18999999999999773
      0 references
      Rhizobium lentis
      16S Identity %
      91.34877384196184
      POCPu
      23.2419940574447
      G+C Difference (%)
      0.25
      0 references
      Rhizobium brockwellii
      16S Identity %
      91.3337846987136
      POCPu
      22.020725388601036
      G+C Difference (%)
      0.05999999999999517
      0 references
      Rhizobium aethiopicum
      16S Identity %
      91.3337846987136
      POCPu
      22.70441626585046
      G+C Difference (%)
      0.13000000000000256
      0 references
      Beijerinckia indica subsp. indica
      16S Identity %
      91.3220338983051
      0 references
      Rhizobium bangladeshense
      16S Identity %
      91.28065395095368
      POCPu
      23.32924244114694
      G+C Difference (%)
      0.030000000000001137
      0 references
      Rhizobium binae
      16S Identity %
      91.28065395095368
      POCPu
      22.63896103896104
      G+C Difference (%)
      0.13000000000000256
      0 references
      Rhizobium beringeri
      16S Identity %
      91.26607989167232
      POCPu
      21.34698700275699
      G+C Difference (%)
      0.1699999999999946
      0 references
      Rhizobium johnstonii
      16S Identity %
      91.26607989167232
      0 references
      Rhizobium etli
      16S Identity %
      91.26607989167232
      POCPu
      22.73619899629064
      G+C Difference (%)
      0.09000000000000341
      0 references
      Rhizobium laguerreae
      16S Identity %
      91.2483039348711
      POCPu
      21.679648492111045
      G+C Difference (%)
      0.1599999999999966
      0 references
      Rhizobium leguminosarum
      16S Identity %
      91.2483039348711
      POCPu
      20.940584478420746
      G+C Difference (%)
      0.35999999999999943
      0 references
      Rhizobium phaseoli
      16S Identity %
      91.18644067796609
      POCPu
      22.444998374336187
      G+C Difference (%)
      0.4200000000000017
      0 references
      Segnochrobactrum spirostomi
      16S Identity %
      91.0629654705484
      POCPu
      27.738079771339486
      G+C Difference (%)
      7.340000000000003
      0 references
      Pseudorhizobium banfieldiae
      16S Identity %
      91.04477611940298
      POCPu
      27.1220969713432
      G+C Difference (%)
      0.9100000000000037
      0 references
      Rhizobium dioscoreae
      16S Identity %
      90.97693351424695
      POCPu
      22.84821717117311
      G+C Difference (%)
      1.2899999999999991
      0 references
      Shinella lacus
      16S Identity %
      90.80459770114942
      POCPu
      22.524675324675325
      G+C Difference (%)
      2.6700000000000017
      0 references
      Beijerinckia indica
      POCPu
      27.343524661090278
      G+C Difference (%)
      3.960000000000001
      0 references
      CAZyme
      GH0
      Occurance
      5
      0 references
      GH13
      Occurance
      4
      0 references
      GH6
      Occurance
      2
      0 references
      GH65
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH19
      Occurance
      4
      0 references
      GH23
      Occurance
      6
      0 references
      GH101
      Occurance
      2
      0 references
      GH71
      Occurance
      1
      0 references
      GH103
      Occurance
      3
      0 references
      GH35
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH135
      Occurance
      1
      0 references
      GH10
      Occurance
      1
      0 references
      GH109
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT51
      Occurance
      6
      0 references
      GT2
      Occurance
      20
      0 references
      GT1
      Occurance
      6
      0 references
      GT4
      Occurance
      25
      0 references
      GT83
      Occurance
      1
      0 references
      GT26
      Occurance
      2
      0 references
      GT9
      Occurance
      5
      0 references
      GT28
      Occurance
      3
      0 references
      GT30
      Occurance
      2
      0 references
      GT19
      Occurance
      1
      0 references
      GT21
      Occurance
      1
      0 references
      PL12
      Occurance
      1
      0 references
      PL0
      Occurance
      1
      0 references
      CE0
      Occurance
      1
      0 references
      CE11
      Occurance
      2
      0 references
      CE9
      Occurance
      1
      0 references
      CE1
      Occurance
      2
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      15
      0 references
      CBM20
      Occurance
      1
      0 references
      CBM41
      Occurance
      1
      0 references
      CBM6
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      CBM51
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Ecosystem
       
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