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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
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Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 16.2
Amount16.2
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.39
Amount0.39
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 6
Amount6
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 7.8
Amount7.8
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 18.1
Amount18.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.21
Amount0.21
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 21.2
Amount21.2
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.29
Amount0.29
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 13.7
Amount13.7
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.15
Amount0.15
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 24.4
Amount24.4
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 24.7
Amount24.7
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.13
Amount0.13
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 23.3
Amount23.3
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.13
Amount0.13
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 16
Amount16
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.19
Amount0.19
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.1
Amount0.1
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 3.8
Amount3.8
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 6.8
Amount6.8
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 1.6
Amount1.6
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.83
Amount0.83
Unit1
Property / MAGs
 
Property / MAGs: GCA_002354635.1_ASM235463v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002354635.1_ASM235463v1_genomic.fna / qualifier
 

Latest revision as of 05:51, 24 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_002354635.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Altericroceibacterium spongiae
      16S Identity %
      30.77956989247312
      POCPu
      36.37868753762793
      G+C Difference (%)
      0.19999999999999574
      0 references
      Croceicoccus gelatinilyticus
      16S Identity %
      26.595030221625255
      POCPu
      37.24357122219012
      G+C Difference (%)
      4.82
      0 references
      Croceicoccus hydrothermalis
      16S Identity %
      26.326393552719946
      POCPu
      38.693009118541035
      G+C Difference (%)
      5.460000000000001
      0 references
      Novosphingobium silvae
      16S Identity %
      25.85627938213566
      POCPu
      32.81540504648074
      G+C Difference (%)
      7.269999999999996
      0 references
      Stakelama marina
      16S Identity %
      25.29209621993127
      POCPu
      42.549512731845326
      G+C Difference (%)
      6.269999999999996
      0 references
      Blastomonas quesadae
      16S Identity %
      25.1892635925671
      0 references
      Novosphingobium indicum
      16S Identity %
      25.068493150684933
      POCPu
      34.45125766487298
      G+C Difference (%)
      5.25
      0 references
      Croceicoccus mobilis
      16S Identity %
      25.033738191632928
      POCPu
      36.903425042111174
      G+C Difference (%)
      4.740000000000002
      0 references
      Croceicoccus estronivorus
      16S Identity %
      24.982888432580424
      POCPu
      36.50865312264861
      G+C Difference (%)
      2.190000000000005
      0 references
      Altererythrobacter oceanensis
      16S Identity %
      24.931318681318682
      0 references
      Alteriqipengyuania flavescens
      16S Identity %
      24.91605104096709
      POCPu
      42.29463679565513
      G+C Difference (%)
      7.420000000000002
      0 references
      Croceibacterium selenioxidans
      16S Identity %
      24.898785425101213
      POCPu
      36.168891648556354
      G+C Difference (%)
      5.840000000000003
      0 references
      Croceicoccus pelagius
      16S Identity %
      24.898785425101213
      POCPu
      40.538413098236774
      G+C Difference (%)
      5.010000000000005
      0 references
      Novosphingobium malaysiense
      16S Identity %
      24.828532235939644
      POCPu
      35.1434034416826
      G+C Difference (%)
      5.560000000000002
      0 references
      Sphingorhabdus litoris
      16S Identity %
      24.82319660537482
      0 references
      Sphingorhabdus marina
      16S Identity %
      24.82319660537482
      0 references
      Novosphingobium chloroacetimidivorans
      16S Identity %
      24.75862068965517
      POCPu
      31.92954575552907
      G+C Difference (%)
      7.469999999999999
      0 references
      Parasphingopyxis lamellibrachiae
      16S Identity %
      24.75862068965517
      POCPu
      49.158137999339715
      G+C Difference (%)
      2.6300000000000026
      0 references
      Sphingopyxis ginsengisoli
      16S Identity %
      24.742974640164498
      0 references
      Novosphingobium fontis
      16S Identity %
      24.646464646464647
      0 references
      Tsuneonella litorea
      16S Identity %
      24.628879892037787
      POCPu
      45.10547132498352
      G+C Difference (%)
      9.180000000000007
      0 references
      Parasphingorhabdus cellanae
      16S Identity %
      24.607703281027106
      POCPu
      64.79351032448378
      ANI %
      78.2212
      G+C Difference (%)
      5.049999999999997
      0 references
      Novosphingobium fluoreni
      16S Identity %
      24.536082474226802
      POCPu
      35.2129941771376
      G+C Difference (%)
      5.609999999999999
      0 references
      Novosphingobium endophyticum
      16S Identity %
      24.513096037609134
      POCPu
      34.740484429065745
      G+C Difference (%)
      6.420000000000002
      0 references
      Blastomonas ursincola
      16S Identity %
      24.51046590141796
      0 references
      Novosphingobium naphthalenivorans
      16S Identity %
      24.49528936742934
      POCPu
      32.571288102261555
      G+C Difference (%)
      6.020000000000003
      0 references
      Blastomonas natatoria
      16S Identity %
      24.493927125506072
      POCPu
      46.67424673109721
      ANI %
      77.4824
      G+C Difference (%)
      5.57
      0 references
      Pontixanthobacter sediminis
      16S Identity %
      24.48700410396717
      0 references
      Croceicoccus marinus
      16S Identity %
      24.467353951890033
      POCPu
      36.979241231209734
      G+C Difference (%)
      6.710000000000008
      0 references
      Sphingopyxis fribergensis
      16S Identity %
      24.426450742240217
      POCPu
      39.08459439345076
      G+C Difference (%)
      5.950000000000003
      0 references
      Novosphingobium soli
      16S Identity %
      24.42019099590723
      0 references
      Novosphingobium guangzhouense
      16S Identity %
      24.41156691324815
      POCPu
      29.546758462421113
      G+C Difference (%)
      5.700000000000003
      0 references
      Sphingorhabdus buctiana
      16S Identity %
      24.38186813186813
      0 references
      Novosphingobium clariflavum
      16S Identity %
      24.36338609772884
      POCPu
      31.70823885109599
      G+C Difference (%)
      7.960000000000008
      0 references
      Croceicoccus ponticola
      16S Identity %
      24.293785310734464
      POCPu
      39.89438310129621
      G+C Difference (%)
      4.330000000000005
      0 references
      Sphingopyxis panaciterrae
      16S Identity %
      24.277854195323243
      POCPu
      40.063889258618396
      G+C Difference (%)
      7.040000000000006
      0 references
      Sphingopyxis witflariensis
      16S Identity %
      24.277067921990586
      POCPu
      41.90333151283452
      G+C Difference (%)
      5.540000000000006
      0 references
      Sphingopyxis bauzanensis
      16S Identity %
      24.226110363391655
      POCPu
      43.071212537805884
      G+C Difference (%)
      5.460000000000001
      0 references
      Sphingopyxis terrae
      16S Identity %
      24.21711899791232
      POCPu
      45.497630331753555
      G+C Difference (%)
      6.760000000000005
      0 references
      Parerythrobacter lacustris
      16S Identity %
      24.18918918918919
      POCPu
      43.960331653389694
      G+C Difference (%)
      6.260000000000005
      0 references
      Sphingorhabdus lutea
      16S Identity %
      24.15730337078652
      POCPu
      47.6070074047318
      G+C Difference (%)
      11.68
      0 references
      Sphingorhabdus flavimaris
      16S Identity %
      24.0855762594893
      0 references
      Novosphingobium pentaromativorans
      16S Identity %
      24.024226110363394
      POCPu
      34.67052162390073
      G+C Difference (%)
      5.220000000000006
      0 references
      Sphingopyxis alaskensis
      16S Identity %
      23.991935483870968
      POCPu
      47.409488139825214
      G+C Difference (%)
      7.659999999999997
      0 references
      Sphingorhabdus pacifica
      16S Identity %
      23.890784982935152
      0 references
      Sphingorhabdus pulchriflava
      16S Identity %
      23.87231089521166
      POCPu
      50.875256268727334
      G+C Difference (%)
      0.07000000000000028
      0 references
      Sphingorhabdus rigui
      16S Identity %
      23.75
      POCPu
      49.69147005444646
      G+C Difference (%)
      1.6999999999999957
      0 references
      Sphingorhabdus wooponensis
      16S Identity %
      23.680555555555554
      POCPu
      49.78091064964755
      G+C Difference (%)
      3.259999999999998
      0 references
      Novosphingopyxis baekryungensis
      16S Identity %
      23.67149758454106
      POCPu
      48.43827466534457
      G+C Difference (%)
      4.590000000000003
      0 references
      Novosphingobium lindaniclasticum
      16S Identity %
      20.68502350570853
      POCPu
      32.096837172979306
      G+C Difference (%)
      6.75
      0 references
      Parasphingorhabdus flavimaris
      POCPu
      76.57304252314452
      ANI %
      83.1052
      G+C Difference (%)
      0.30999999999999517
      0 references
      Parasphingorhabdus marina
      POCPu
      64.97646880218613
      ANI %
      78.7724
      G+C Difference (%)
      0.4399999999999977
      0 references
      Parasphingorhabdus litoris
      POCPu
      64.1121775644871
      ANI %
      78.2149
      G+C Difference (%)
      5.099999999999994
      0 references
      Sphingomonas ursincola
      POCPu
      47.78523489932886
      ANI %
      77.6523
      G+C Difference (%)
      6.890000000000001
      0 references
      Qipengyuania oceanensis
      POCPu
      45.65619223659889
      G+C Difference (%)
      6.1200000000000045
      0 references
      Allopontixanthobacter sediminis
      POCPu
      43.83828543594739
      G+C Difference (%)
      3.740000000000002
      0 references
      CAZyme
      GH13
      Occurance
      4
      0 references
      GH6
      Occurance
      2
      0 references
      GH65
      Occurance
      1
      0 references
      GH28
      Occurance
      5
      0 references
      GH23
      Occurance
      6
      0 references
      GH20
      Occurance
      3
      0 references
      GH101
      Occurance
      2
      0 references
      GH36
      Occurance
      1
      0 references
      GH102
      Occurance
      1
      0 references
      GH104
      Occurance
      1
      0 references
      GH43
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GH19
      Occurance
      3
      0 references
      GH103
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH0
      Occurance
      4
      0 references
      GH25
      Occurance
      1
      0 references
      GH108
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT51
      Occurance
      5
      0 references
      GT4
      Occurance
      21
      0 references
      GT90
      Occurance
      1
      0 references
      GT2
      Occurance
      9
      0 references
      GT1
      Occurance
      6
      0 references
      GT28
      Occurance
      4
      0 references
      GT32
      Occurance
      1
      0 references
      GT81
      Occurance
      1
      0 references
      GT0
      Occurance
      3
      0 references
      PL0
      Occurance
      2
      0 references
      CE11
      Occurance
      2
      0 references
      CE4
      Occurance
      3
      0 references
      CE9
      Occurance
      1
      0 references
      CE12
      Occurance
      1
      0 references
      CBM50
      Occurance
      10
      0 references
      CBM41
      Occurance
      5
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM9
      Occurance
      1
      0 references
      CBM32
      Occurance
      1
      0 references
      CBM5
      Occurance
      3
      0 references
      CBM48
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      Ecosystem
       
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