GCA_035637535.1 (Q214902): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 80.10752688172043 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Pyrobaculum neutrophilum / qualifier | |||||||
POCPu: 2.8044466902475995
| |||||||
| Property / Comparison to close relatives: Pyrobaculum neutrophilum / qualifier | |||||||
G+C Difference (%): 8.129999999999995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoproteus thermophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoproteus thermophilus / qualifier | |||||||
16S Identity %: 79.97208653175157
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum igneiluti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum igneiluti / qualifier | |||||||
16S Identity %: 79.90622906898861
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Acidilobus aceticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Acidilobus aceticus / qualifier | |||||||
16S Identity %: 79.88587731811697
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pyrobaculum oguniense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pyrobaculum oguniense / qualifier | |||||||
16S Identity %: 79.46793997271487
| |||||||
| Property / Comparison to close relatives: Pyrobaculum oguniense / qualifier | |||||||
POCPu: 2.660342338626521
| |||||||
| Property / Comparison to close relatives: Pyrobaculum oguniense / qualifier | |||||||
G+C Difference (%): 3.269999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus ureiphilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus ureiphilus / qualifier | |||||||
16S Identity %: 78.7321063394683
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
16S Identity %: 78.52760736196319
| |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
POCPu: 3.619140150595093
| |||||||
| Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier | |||||||
G+C Difference (%): 18.370000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Geoglobus acetivorans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Geoglobus acetivorans / qualifier | |||||||
16S Identity %: 78.27317763623496
| |||||||
| Property / Comparison to close relatives: Geoglobus acetivorans / qualifier | |||||||
POCPu: 2.561005073689297
| |||||||
| Property / Comparison to close relatives: Geoglobus acetivorans / qualifier | |||||||
G+C Difference (%): 4.939999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
16S Identity %: 77.99307958477509
| |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
POCPu: 2.2887323943661975
| |||||||
| Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier | |||||||
G+C Difference (%): 9.910000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / qualifier | |||||||
16S Identity %: 77.79291553133515
| |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / qualifier | |||||||
POCPu: 2.036793692509855
| |||||||
| Property / Comparison to close relatives: Methanolobus zinderi / qualifier | |||||||
G+C Difference (%): 7.719999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
16S Identity %: 77.71982116244412
| |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
POCPu: 3.156098947967018
| |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
G+C Difference (%): 2.789999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / qualifier | |||||||
16S Identity %: 77.27891156462586
| |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / qualifier | |||||||
POCPu: 2.4014499320344362
| |||||||
| Property / Comparison to close relatives: Methanolobus mangrovi / qualifier | |||||||
G+C Difference (%): 10.170000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus bombayensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus bombayensis / qualifier | |||||||
16S Identity %: 76.94406548431105
| |||||||
| Property / Comparison to close relatives: Methanolobus bombayensis / qualifier | |||||||
POCPu: 2.3260687342833193
| |||||||
| Property / Comparison to close relatives: Methanolobus bombayensis / qualifier | |||||||
G+C Difference (%): 12.060000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
16S Identity %: 76.90217391304348
| |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
POCPu: 2.414439756211908
| |||||||
| Property / Comparison to close relatives: Methanococcoides orientis / qualifier | |||||||
G+C Difference (%): 9.100000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / qualifier | |||||||
16S Identity %: 76.66666666666667
| |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / qualifier | |||||||
POCPu: 2.169474221541603
| |||||||
| Property / Comparison to close relatives: Methanohalophilus mahii / qualifier | |||||||
G+C Difference (%): 9.160000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanohalophilus halophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier | |||||||
16S Identity %: 76.62337662337663
| |||||||
| Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier | |||||||
POCPu: 2.0785804816223066
| |||||||
| Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier | |||||||
G+C Difference (%): 9.380000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
16S Identity %: 75.83390061266168
| |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
POCPu: 2.690341673392521
| |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
G+C Difference (%): 1.769999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
16S Identity %: 75.64802182810368
| |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
POCPu: 1.9374369323915237
| |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
G+C Difference (%): 0.7899999999999991
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH101 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH101 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH105 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH105 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH109 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH109 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 13
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 10
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE12 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM57 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: 4-aminobutyrate degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: 4-aminobutyrate degradation / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.4
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 1.6
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0.08
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 1
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0.4
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 11:27, 22 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_035637535.1 |
genome assembly |
Statements
no current description - please contribute here
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